| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294225
Identifier: 197294225
GI number: 197294225
Start: 90243
End: 91340
Strand: Reverse
Name: 197294225
Synonym: PAa_0083
Alternate gene names: NA
Gene position: 91340-90243 (Counterclockwise)
Preceding gene: 197294259
Following gene: 197294224
Centisome position: 10.38
GC content: 25.87
Gene sequence:
>1098_bases TTGAATAACAATCATCAGCCTCAAATTTTACAAAAATATTGGCAGTATTTTTTGGGGGTTTTATTAACAGTTTTATTTAT CTACCATTATCAGTTTGTTTTTGCAAATAGTGAAGATAAATCAACTGATATTACAACAATTACAACAAATTTGGGAGTTT TTGAAAATATTCCCGAAGACACAGAAATATGTCAAAGAATCAAAGAATTGCATTCTGAGTTTAAAAATAAACAAATTAAA AAAAATTGCGACATCCAAATCCAAATAAAATCAGTAGAAGTTGATGGTCAACTTTTAGAGTATGAAGGAATAGCGTATAT TGTAGCGAAAGAAAATTCAAAAACTATCAAAGGCAAAAAAGCACTGACTTTTTATATTAAACAAGATTTAGGCAAATGCA TTCAAAATAAAGATTTAGGTGAAGTTGAATTAAAAAAAATTAATGCCAAAGTCCCTGAAATACAAGATTTAAAAGAAATT ATTGCAAAAATAAATCCTGAATTAGATTTAGATGAAGTTGAAATTTTAGAAAAAAGATTGGAAAGAAACAAATTCACTTT AAAAGCAAAAGAAAACTCTTTAAAATATAAAGGCAAAGCGGAATTTAATTATAAAATAAAAGAAATAGTTAAAAAAGAAA TTGGTGAAAAAATTGTAGAAAAAATTTTGCACGAAAAGAAAAACGCCACTTCATCAGATAATCAAGAATCCAGGAAAGAA ATTAATTTTGAAGATTTAAAAAAAACAATTAATATCGCTGTTGAAAAAGAAATGAAACGTAAAGAAGCCACTGAAGAATC TGTCTTGAATAAAGGCCTGGAAGCGGCAGGTTTAAAAACTCAACATCCAGAAAATCAAGAAGAGGAAGAACTGATTGCAC CAAACAATGATGTTGATGAAAATATTCAACATATTAGTGATGAATTAAATTCAGAAGAAACACCTGCATTAACATCAAAA ACAATAAAAGACAAAATTACTCAAAATAAAACATATATTGTTTATATTATTGCTGCTTGTATTATTTGTTTTTTATTTGT TATATTCAGTATCTTTTTTATCTCTTGTAAAAAAACAAAAAAAATAATAAAGGCTTAA
Upstream 100 bases:
>100_bases ATAAAAAAACACGATAAGAATAAGATTCATTTTAAAATTTTGATTATGATCTTAAGTCTTTGGAAGGCTAGGATATTAGA AAGTTAAATTAAGGAAATCA
Downstream 100 bases:
>100_bases AAGAGATTGAAAAATCTCTTTTTTCTTTTTAGTCTTTATAAAAAAGGAAAACAAAAAAATAAAACAAATGACTTCATCAT TTTTTCAAAAAAAAATAATT
Product: Probable phage associated protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MNNNHQPQILQKYWQYFLGVLLTVLFIYHYQFVFANSEDKSTDITTITTNLGVFENIPEDTEICQRIKELHSEFKNKQIK KNCDIQIQIKSVEVDGQLLEYEGIAYIVAKENSKTIKGKKALTFYIKQDLGKCIQNKDLGEVELKKINAKVPEIQDLKEI IAKINPELDLDEVEILEKRLERNKFTLKAKENSLKYKGKAEFNYKIKEIVKKEIGEKIVEKILHEKKNATSSDNQESRKE INFEDLKKTINIAVEKEMKRKEATEESVLNKGLEAAGLKTQHPENQEEEELIAPNNDVDENIQHISDELNSEETPALTSK TIKDKITQNKTYIVYIIAACIICFLFVIFSIFFISCKKTKKIIKA
Sequences:
>Translated_365_residues MNNNHQPQILQKYWQYFLGVLLTVLFIYHYQFVFANSEDKSTDITTITTNLGVFENIPEDTEICQRIKELHSEFKNKQIK KNCDIQIQIKSVEVDGQLLEYEGIAYIVAKENSKTIKGKKALTFYIKQDLGKCIQNKDLGEVELKKINAKVPEIQDLKEI IAKINPELDLDEVEILEKRLERNKFTLKAKENSLKYKGKAEFNYKIKEIVKKEIGEKIVEKILHEKKNATSSDNQESRKE INFEDLKKTINIAVEKEMKRKEATEESVLNKGLEAAGLKTQHPENQEEEELIAPNNDVDENIQHISDELNSEETPALTSK TIKDKITQNKTYIVYIIAACIICFLFVIFSIFFISCKKTKKIIKA >Mature_365_residues MNNNHQPQILQKYWQYFLGVLLTVLFIYHYQFVFANSEDKSTDITTITTNLGVFENIPEDTEICQRIKELHSEFKNKQIK KNCDIQIQIKSVEVDGQLLEYEGIAYIVAKENSKTIKGKKALTFYIKQDLGKCIQNKDLGEVELKKINAKVPEIQDLKEI IAKINPELDLDEVEILEKRLERNKFTLKAKENSLKYKGKAEFNYKIKEIVKKEIGEKIVEKILHEKKNATSSDNQESRKE INFEDLKKTINIAVEKEMKRKEATEESVLNKGLEAAGLKTQHPENQEEEELIAPNNDVDENIQHISDELNSEETPALTSK TIKDKITQNKTYIVYIIAACIICFLFVIFSIFFISCKKTKKIIKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42255; Mature: 42255
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNNHQPQILQKYWQYFLGVLLTVLFIYHYQFVFANSEDKSTDITTITTNLGVFENIPED CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEECCCHHCCCCCH TEICQRIKELHSEFKNKQIKKNCDIQIQIKSVEVDGQLLEYEGIAYIVAKENSKTIKGKK HHHHHHHHHHHHHHHCCHHHCCCCEEEEEEEEEECCEEEEECCEEEEEEECCCCCCCCCH ALTFYIKQDLGKCIQNKDLGEVELKKINAKVPEIQDLKEIIAKINPELDLDEVEILEKRL HHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHH ERNKFTLKAKENSLKYKGKAEFNYKIKEIVKKEIGEKIVEKILHEKKNATSSDNQESRKE HCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHC INFEDLKKTINIAVEKEMKRKEATEESVLNKGLEAAGLKTQHPENQEEEELIAPNNDVDE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCHHCCCCCCCHHH NIQHISDELNSEETPALTSKTIKDKITQNKTYIVYIIAACIICFLFVIFSIFFISCKKTK HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIIKA HHHCC >Mature Secondary Structure MNNNHQPQILQKYWQYFLGVLLTVLFIYHYQFVFANSEDKSTDITTITTNLGVFENIPED CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEECCCHHCCCCCH TEICQRIKELHSEFKNKQIKKNCDIQIQIKSVEVDGQLLEYEGIAYIVAKENSKTIKGKK HHHHHHHHHHHHHHHCCHHHCCCCEEEEEEEEEECCEEEEECCEEEEEEECCCCCCCCCH ALTFYIKQDLGKCIQNKDLGEVELKKINAKVPEIQDLKEIIAKINPELDLDEVEILEKRL HHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHH ERNKFTLKAKENSLKYKGKAEFNYKIKEIVKKEIGEKIVEKILHEKKNATSSDNQESRKE HCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHC INFEDLKKTINIAVEKEMKRKEATEESVLNKGLEAAGLKTQHPENQEEEELIAPNNDVDE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCHHCCCCCCCHHH NIQHISDELNSEETPALTSKTIKDKITQNKTYIVYIIAACIICFLFVIFSIFFISCKKTK HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIIKA HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA