Definition Candidatus Phytoplasma australiense, complete genome.
Accession NC_010544
Length 879,959

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The map label for this gene is 197294225

Identifier: 197294225

GI number: 197294225

Start: 90243

End: 91340

Strand: Reverse

Name: 197294225

Synonym: PAa_0083

Alternate gene names: NA

Gene position: 91340-90243 (Counterclockwise)

Preceding gene: 197294259

Following gene: 197294224

Centisome position: 10.38

GC content: 25.87

Gene sequence:

>1098_bases
TTGAATAACAATCATCAGCCTCAAATTTTACAAAAATATTGGCAGTATTTTTTGGGGGTTTTATTAACAGTTTTATTTAT
CTACCATTATCAGTTTGTTTTTGCAAATAGTGAAGATAAATCAACTGATATTACAACAATTACAACAAATTTGGGAGTTT
TTGAAAATATTCCCGAAGACACAGAAATATGTCAAAGAATCAAAGAATTGCATTCTGAGTTTAAAAATAAACAAATTAAA
AAAAATTGCGACATCCAAATCCAAATAAAATCAGTAGAAGTTGATGGTCAACTTTTAGAGTATGAAGGAATAGCGTATAT
TGTAGCGAAAGAAAATTCAAAAACTATCAAAGGCAAAAAAGCACTGACTTTTTATATTAAACAAGATTTAGGCAAATGCA
TTCAAAATAAAGATTTAGGTGAAGTTGAATTAAAAAAAATTAATGCCAAAGTCCCTGAAATACAAGATTTAAAAGAAATT
ATTGCAAAAATAAATCCTGAATTAGATTTAGATGAAGTTGAAATTTTAGAAAAAAGATTGGAAAGAAACAAATTCACTTT
AAAAGCAAAAGAAAACTCTTTAAAATATAAAGGCAAAGCGGAATTTAATTATAAAATAAAAGAAATAGTTAAAAAAGAAA
TTGGTGAAAAAATTGTAGAAAAAATTTTGCACGAAAAGAAAAACGCCACTTCATCAGATAATCAAGAATCCAGGAAAGAA
ATTAATTTTGAAGATTTAAAAAAAACAATTAATATCGCTGTTGAAAAAGAAATGAAACGTAAAGAAGCCACTGAAGAATC
TGTCTTGAATAAAGGCCTGGAAGCGGCAGGTTTAAAAACTCAACATCCAGAAAATCAAGAAGAGGAAGAACTGATTGCAC
CAAACAATGATGTTGATGAAAATATTCAACATATTAGTGATGAATTAAATTCAGAAGAAACACCTGCATTAACATCAAAA
ACAATAAAAGACAAAATTACTCAAAATAAAACATATATTGTTTATATTATTGCTGCTTGTATTATTTGTTTTTTATTTGT
TATATTCAGTATCTTTTTTATCTCTTGTAAAAAAACAAAAAAAATAATAAAGGCTTAA

Upstream 100 bases:

>100_bases
ATAAAAAAACACGATAAGAATAAGATTCATTTTAAAATTTTGATTATGATCTTAAGTCTTTGGAAGGCTAGGATATTAGA
AAGTTAAATTAAGGAAATCA

Downstream 100 bases:

>100_bases
AAGAGATTGAAAAATCTCTTTTTTCTTTTTAGTCTTTATAAAAAAGGAAAACAAAAAAATAAAACAAATGACTTCATCAT
TTTTTCAAAAAAAAATAATT

Product: Probable phage associated protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MNNNHQPQILQKYWQYFLGVLLTVLFIYHYQFVFANSEDKSTDITTITTNLGVFENIPEDTEICQRIKELHSEFKNKQIK
KNCDIQIQIKSVEVDGQLLEYEGIAYIVAKENSKTIKGKKALTFYIKQDLGKCIQNKDLGEVELKKINAKVPEIQDLKEI
IAKINPELDLDEVEILEKRLERNKFTLKAKENSLKYKGKAEFNYKIKEIVKKEIGEKIVEKILHEKKNATSSDNQESRKE
INFEDLKKTINIAVEKEMKRKEATEESVLNKGLEAAGLKTQHPENQEEEELIAPNNDVDENIQHISDELNSEETPALTSK
TIKDKITQNKTYIVYIIAACIICFLFVIFSIFFISCKKTKKIIKA

Sequences:

>Translated_365_residues
MNNNHQPQILQKYWQYFLGVLLTVLFIYHYQFVFANSEDKSTDITTITTNLGVFENIPEDTEICQRIKELHSEFKNKQIK
KNCDIQIQIKSVEVDGQLLEYEGIAYIVAKENSKTIKGKKALTFYIKQDLGKCIQNKDLGEVELKKINAKVPEIQDLKEI
IAKINPELDLDEVEILEKRLERNKFTLKAKENSLKYKGKAEFNYKIKEIVKKEIGEKIVEKILHEKKNATSSDNQESRKE
INFEDLKKTINIAVEKEMKRKEATEESVLNKGLEAAGLKTQHPENQEEEELIAPNNDVDENIQHISDELNSEETPALTSK
TIKDKITQNKTYIVYIIAACIICFLFVIFSIFFISCKKTKKIIKA
>Mature_365_residues
MNNNHQPQILQKYWQYFLGVLLTVLFIYHYQFVFANSEDKSTDITTITTNLGVFENIPEDTEICQRIKELHSEFKNKQIK
KNCDIQIQIKSVEVDGQLLEYEGIAYIVAKENSKTIKGKKALTFYIKQDLGKCIQNKDLGEVELKKINAKVPEIQDLKEI
IAKINPELDLDEVEILEKRLERNKFTLKAKENSLKYKGKAEFNYKIKEIVKKEIGEKIVEKILHEKKNATSSDNQESRKE
INFEDLKKTINIAVEKEMKRKEATEESVLNKGLEAAGLKTQHPENQEEEELIAPNNDVDENIQHISDELNSEETPALTSK
TIKDKITQNKTYIVYIIAACIICFLFVIFSIFFISCKKTKKIIKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42255; Mature: 42255

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNNHQPQILQKYWQYFLGVLLTVLFIYHYQFVFANSEDKSTDITTITTNLGVFENIPED
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEECCCHHCCCCCH
TEICQRIKELHSEFKNKQIKKNCDIQIQIKSVEVDGQLLEYEGIAYIVAKENSKTIKGKK
HHHHHHHHHHHHHHHCCHHHCCCCEEEEEEEEEECCEEEEECCEEEEEEECCCCCCCCCH
ALTFYIKQDLGKCIQNKDLGEVELKKINAKVPEIQDLKEIIAKINPELDLDEVEILEKRL
HHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHH
ERNKFTLKAKENSLKYKGKAEFNYKIKEIVKKEIGEKIVEKILHEKKNATSSDNQESRKE
HCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHC
INFEDLKKTINIAVEKEMKRKEATEESVLNKGLEAAGLKTQHPENQEEEELIAPNNDVDE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCHHCCCCCCCHHH
NIQHISDELNSEETPALTSKTIKDKITQNKTYIVYIIAACIICFLFVIFSIFFISCKKTK
HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KIIKA
HHHCC
>Mature Secondary Structure
MNNNHQPQILQKYWQYFLGVLLTVLFIYHYQFVFANSEDKSTDITTITTNLGVFENIPED
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEECCCHHCCCCCH
TEICQRIKELHSEFKNKQIKKNCDIQIQIKSVEVDGQLLEYEGIAYIVAKENSKTIKGKK
HHHHHHHHHHHHHHHCCHHHCCCCEEEEEEEEEECCEEEEECCEEEEEEECCCCCCCCCH
ALTFYIKQDLGKCIQNKDLGEVELKKINAKVPEIQDLKEIIAKINPELDLDEVEILEKRL
HHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHH
ERNKFTLKAKENSLKYKGKAEFNYKIKEIVKKEIGEKIVEKILHEKKNATSSDNQESRKE
HCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHC
INFEDLKKTINIAVEKEMKRKEATEESVLNKGLEAAGLKTQHPENQEEEELIAPNNDVDE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCHHCCCCCCCHHH
NIQHISDELNSEETPALTSKTIKDKITQNKTYIVYIIAACIICFLFVIFSIFFISCKKTK
HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KIIKA
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA