| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294223
Identifier: 197294223
GI number: 197294223
Start: 87870
End: 88112
Strand: Direct
Name: 197294223
Synonym: PAa_0081
Alternate gene names: NA
Gene position: 87870-88112 (Clockwise)
Preceding gene: 197294221
Following gene: 197294226
Centisome position: 9.99
GC content: 15.64
Gene sequence:
>243_bases TTGCCTAAAAAAGATAATAGGACTTTAAACTATCTATCTTTCTTTTTATATTTTTGTTTTGCTAAACGGTTGAGTTATTT TATTTTTAAAAAAGGAATAAAAACTTATTTATTTTTCAAATTACAAATAAAAAACAAAACAAAATTAAAAAAACTTAATA ATTTTATTTTTAAATTTTTGAAAACATTATTATTTGTGAACAAAAAATTTAATTATCAACTCCTTTTGAATATTTTGTAT TAA
Upstream 100 bases:
>100_bases TTATTTTTAGTTTTCATCACTTGCCTCCTTTAATGAATTTTAATTTCAGTTATTTCACCTTCATAATTGACAACAATAAA AGAATCGTTTTTAAAGACCA
Downstream 100 bases:
>100_bases AAAAAATTGTACCATATCTTACTAACAAATAATAAAATTATTTGCCTAGTTACTCTTCAAAAATCCATATTCCAATCTTA TTATTTGCTTAATATATTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 80; Mature: 79
Protein sequence:
>80_residues MPKKDNRTLNYLSFFLYFCFAKRLSYFIFKKGIKTYLFFKLQIKNKTKLKKLNNFIFKFLKTLLFVNKKFNYQLLLNILY
Sequences:
>Translated_80_residues MPKKDNRTLNYLSFFLYFCFAKRLSYFIFKKGIKTYLFFKLQIKNKTKLKKLNNFIFKFLKTLLFVNKKFNYQLLLNILY >Mature_79_residues PKKDNRTLNYLSFFLYFCFAKRLSYFIFKKGIKTYLFFKLQIKNKTKLKKLNNFIFKFLKTLLFVNKKFNYQLLLNILY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9958; Mature: 9827
Theoretical pI: Translated: 10.98; Mature: 10.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKKDNRTLNYLSFFLYFCFAKRLSYFIFKKGIKTYLFFKLQIKNKTKLKKLNNFIFKFL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHH KTLLFVNKKFNYQLLLNILY HHHHHHCCCCCHHHHHEECC >Mature Secondary Structure PKKDNRTLNYLSFFLYFCFAKRLSYFIFKKGIKTYLFFKLQIKNKTKLKKLNNFIFKFL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHH KTLLFVNKKFNYQLLLNILY HHHHHHCCCCCHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA