| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294215
Identifier: 197294215
GI number: 197294215
Start: 70867
End: 71949
Strand: Reverse
Name: 197294215
Synonym: PAa_0065
Alternate gene names: NA
Gene position: 71949-70867 (Counterclockwise)
Preceding gene: 197294216
Following gene: 197294214
Centisome position: 8.18
GC content: 28.53
Gene sequence:
>1083_bases ATGGAGTTATTTCAAGTATTAGTTATTATAGGTATTTTAGGAGTTTTTTTTGGATTGGGTCCTTTATTGATTTGGTTTGT TCAAAAACAGGTAAATAATAAATTAAACAATGTAGAAAATATTAAATTAAAAATTGAAGTTGAGATAATAACTAAGCAAA AGAAATTAAACCAAAAAATATCTGAGTTAGTAAATAATAAATCTTTATCAGTTCAAGAAAAAACTGAATTACAAGAAGAA ATAAATACTATCCAAACTGAATTAAGGCAGCAACAAGCAGAATTATCACATAATCAAATGTTGACAGGAAAATTAAAAGC TAAAAAATATACAAAAAGAAATCCAATAAAAGCTATAATTATATATTATTGTTTTATAATAAGTATAATTGCTATTTTTG GTGGTTTTATATTTTTAGACAATAAATACGATATAACAAATTCAAAACCCAAAACTTATACTATTACTGAACCGAAATTA GAAATTGAAGTTGAATGGTTTGAAGGATACCGTTCTAGAGATGATAACTACCAAATTAAGAAATATTATAAAGCAGATGG TTATGACCCCAATGCAGAATTTGGGGCCACAAAAGATTGGAAAGGTAGTCCTTGTCAAAGTTATAGTCATGATGTTAATC ACCTTGTTTTGGGTCACCAAATGATTAAAGTTAAATACACTTTCTACGGTCTCAATGGCCTTGGTCGTGGAAAGCACCGT GAATACGAGCCAACTGATATAATGCCGTTTATGAAAAACCCTTTTGACAAATGGGAAGTAAAAGATAGCAGGATTGATTT TTTTGATACTTTCCATATGAAACGTAAAGATGATGATTCACAATTTAATAATATGTTTATCCACAACCGTTCAAACCACT ACACAAAACTCAACTACAAAGGCCCGAAATGGTTAATTGAAGAAGATAAAGACTTTTTCATGGATGAAGTTAGTTGCCAT ATCATAGACCCTAAAGATTCCATATATCCCAAAGATGAAATGAAAAATTACTACCTTCACTTCAACCCAAAACAAAGATA TATCACGCTTTACACTAAGAAATTTAATACAAAAAATAATTAA
Upstream 100 bases:
>100_bases AACATGGTTTGGTCGGTAATGCAATTTTTTTGCATTACCAGATTAGATTATGATACAATGATGATAAGTTATAAAAATAA AAAAGGAAGTTAATTATAGG
Downstream 100 bases:
>100_bases AATAAATAAAAATAAGGAGTTTAATAATTAATGTTTAAATTAAAAAAACGTTTTTTTGTGTTGAATATAATTTTATTTAG TGGTTTAGGGTTATTATTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MELFQVLVIIGILGVFFGLGPLLIWFVQKQVNNKLNNVENIKLKIEVEIITKQKKLNQKISELVNNKSLSVQEKTELQEE INTIQTELRQQQAELSHNQMLTGKLKAKKYTKRNPIKAIIIYYCFIISIIAIFGGFIFLDNKYDITNSKPKTYTITEPKL EIEVEWFEGYRSRDDNYQIKKYYKADGYDPNAEFGATKDWKGSPCQSYSHDVNHLVLGHQMIKVKYTFYGLNGLGRGKHR EYEPTDIMPFMKNPFDKWEVKDSRIDFFDTFHMKRKDDDSQFNNMFIHNRSNHYTKLNYKGPKWLIEEDKDFFMDEVSCH IIDPKDSIYPKDEMKNYYLHFNPKQRYITLYTKKFNTKNN
Sequences:
>Translated_360_residues MELFQVLVIIGILGVFFGLGPLLIWFVQKQVNNKLNNVENIKLKIEVEIITKQKKLNQKISELVNNKSLSVQEKTELQEE INTIQTELRQQQAELSHNQMLTGKLKAKKYTKRNPIKAIIIYYCFIISIIAIFGGFIFLDNKYDITNSKPKTYTITEPKL EIEVEWFEGYRSRDDNYQIKKYYKADGYDPNAEFGATKDWKGSPCQSYSHDVNHLVLGHQMIKVKYTFYGLNGLGRGKHR EYEPTDIMPFMKNPFDKWEVKDSRIDFFDTFHMKRKDDDSQFNNMFIHNRSNHYTKLNYKGPKWLIEEDKDFFMDEVSCH IIDPKDSIYPKDEMKNYYLHFNPKQRYITLYTKKFNTKNN >Mature_360_residues MELFQVLVIIGILGVFFGLGPLLIWFVQKQVNNKLNNVENIKLKIEVEIITKQKKLNQKISELVNNKSLSVQEKTELQEE INTIQTELRQQQAELSHNQMLTGKLKAKKYTKRNPIKAIIIYYCFIISIIAIFGGFIFLDNKYDITNSKPKTYTITEPKL EIEVEWFEGYRSRDDNYQIKKYYKADGYDPNAEFGATKDWKGSPCQSYSHDVNHLVLGHQMIKVKYTFYGLNGLGRGKHR EYEPTDIMPFMKNPFDKWEVKDSRIDFFDTFHMKRKDDDSQFNNMFIHNRSNHYTKLNYKGPKWLIEEDKDFFMDEVSCH IIDPKDSIYPKDEMKNYYLHFNPKQRYITLYTKKFNTKNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42814; Mature: 42814
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELFQVLVIIGILGVFFGLGPLLIWFVQKQVNNKLNNVENIKLKIEVEIITKQKKLNQKI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCHHHHHHHH SELVNNKSLSVQEKTELQEEINTIQTELRQQQAELSHNQMLTGKLKAKKYTKRNPIKAII HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHCCCCCHHHHH IYYCFIISIIAIFGGFIFLDNKYDITNSKPKTYTITEPKLEIEVEWFEGYRSRDDNYQIK HHHHHHHHHHHHHCCEEEECCEEECCCCCCCEEEEECCCEEEEEEEECCCCCCCCCEEEE KYYKADGYDPNAEFGATKDWKGSPCQSYSHDVNHLVLGHQMIKVKYTFYGLNGLGRGKHR EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECEEEEEEEEEEEECCCCCCCCCC EYEPTDIMPFMKNPFDKWEVKDSRIDFFDTFHMKRKDDDSQFNNMFIHNRSNHYTKLNYK CCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHCCEEEECCCCCEEEEECC GPKWLIEEDKDFFMDEVSCHIIDPKDSIYPKDEMKNYYLHFNPKQRYITLYTKKFNTKNN CCCEEEECCCHHHHCCCEEEEECCCCCCCCHHHCCCEEEEECCCCCEEEEEEEECCCCCC >Mature Secondary Structure MELFQVLVIIGILGVFFGLGPLLIWFVQKQVNNKLNNVENIKLKIEVEIITKQKKLNQKI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCHHHHHHHH SELVNNKSLSVQEKTELQEEINTIQTELRQQQAELSHNQMLTGKLKAKKYTKRNPIKAII HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHCCCCCHHHHH IYYCFIISIIAIFGGFIFLDNKYDITNSKPKTYTITEPKLEIEVEWFEGYRSRDDNYQIK HHHHHHHHHHHHHCCEEEECCEEECCCCCCCEEEEECCCEEEEEEEECCCCCCCCCEEEE KYYKADGYDPNAEFGATKDWKGSPCQSYSHDVNHLVLGHQMIKVKYTFYGLNGLGRGKHR EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECEEEEEEEEEEEECCCCCCCCCC EYEPTDIMPFMKNPFDKWEVKDSRIDFFDTFHMKRKDDDSQFNNMFIHNRSNHYTKLNYK CCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHCCEEEECCCCCEEEEECC GPKWLIEEDKDFFMDEVSCHIIDPKDSIYPKDEMKNYYLHFNPKQRYITLYTKKFNTKNN CCCEEEECCCHHHHCCCEEEEECCCCCCCCHHHCCCEEEEECCCCCEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA