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The map label for this gene is 197294174

Identifier: 197294174

GI number: 197294174

Start: 8338

End: 10023

Strand: Direct

Name: 197294174

Synonym: PAa_0006

Alternate gene names: NA

Gene position: 8338-10023 (Clockwise)

Preceding gene: 197294173

Following gene: 197294175

Centisome position: 0.95

GC content: 26.63

Gene sequence:

>1686_bases
GTGATTGACATTAAATTTTTTGCTTTAGGTGGTTTGGGCGAAAATGGCAAAAATTTTTATCTATTACAAATTAATGAATC
TTGCTTTATTATTGATGCTGGACTAAAATATCCTAGTGTTTCTTTGTATGGCATAGATGCCATGATAGCTGATTACCATA
AATTAGAAAGCATGAAAGATAAAATTAAAGGTGTTTTTTTAACTTCTGCTTTTGAAACTAATTTAGGTGCTGTACCATAT
TTTATTAAAGAATATAATTTACCTATTTATACTTCTTATTTTACGATGGAAGTTTTAAAAAATTATTTTGCAAGTCATAA
AATTAATTATCAAAATCTAAATTTAAATGTTATAAAAACAAATGAAATTCTTCGCTTTAAAGATGTAGAAATTTCTTTTT
TTGCTACATCTCAATTAATCCCAGAAACATTAGGCATTTCTTTTCAAACCAGTTTAGGTGCCATTGTTTATACAGGAGAA
TTAAAATCTTTAGAATCTCAAAATCAATTTTTCCAAACAAATTTAACTCAATTAACTAAATCAACGCAACAAAAAGTTTT
AGCATTTTTGCCTGCCTCACAAAGAGCTTTTAATTATTCTTATGATGAATCTCAAAATAATTTCGATCACAAAATAAGTA
ATTATTTCATCAATTATTCTTTAAAACCTAAAGGCATTATCGTTGTTGCCTCTTTAGCTCCCGATCTCTTTAAAATCCAA
AAAGCAATTACTTTGGCTTGTAAGTTAAATTTTAAAGTAGCTATTTTAGGAAATGAAAATGAAGCAATTATTGATGTGGC
TTTAAAAAAAGAATTTTTAAAAATTCCTGATGCTAATTTCGTTAAATTAAATACTTTTGAAGAGCATACTAAACATAATC
AATTAGTAGTTTTTCTCTTTGGAAAACATTTTGCAACTTTACAACGTTTGCAACAAATGGCAAATAAAACAGATCCCAAA
ATTCACCTAAATTCTCAAGATTTGATTTTATTAATGTCTCAAGACATGGCAGGAATTGCAAAGATGCAATCCCAAACTTT
AGATACTTTATCTCGTCATAATATTAAATCCCATCTTTTAATTAAAGATTTATCGTTGTCTGAAAGTAATTATGAACAAA
ATTTAAAAATAATGTTAAATTTTTTAAAACCTCGCTACATCATTCCTGTTATGGGAGAATATCGCCATCAGTATCAAGTA
AAAAAAATAGCTCAAAAAAACGGTTTTAAAAGTAATCAGATCTTTTTATTAGAAAACGGATCTATTTGGCGTGCCTCCTC
TGATAAAGAACCTTTTGTTGAAAATAAAGTTTTTTCGTTAAACGAAATTTTAATCGATGGCACTCCTGTTGCTGACGGAA
AAGAATTTATTATGAAAGACCGTGAATTTTTAGCCGCTGATGGTGTTGTTATTTTAGTTGTGAATGTTAATGCTAAATAT
AAAAAAATTGTGGGAGAGCCAAAAATAGTTAGTAAAGGTTTTTTAGAACAAACAGAAACTAATAATATTTTTGCTAAATT
AAAAGATGTTTTTGATGAACAAAGTGCCGTTTTTTTAACAAATAAATATCTTAAATGGAATGATTTTAAAAAACACATTA
GAGAATCTATCTCTAAGTTTTTATTCAAAGAAACCAAAAAAAGACCAATTATAATTCCTATTTTTATAAGTGTTAGAAAT
GAATAA

Upstream 100 bases:

>100_bases
CGGATTTTTTTATTGTTTGTCTCCAAAGAGAAAATAAATTAACGCTTTTTTGATAATGAAATAATGAAAAAACAATAAAC
AATAATCTGGAGGCTTACAA

Downstream 100 bases:

>100_bases
AATTATTCTTCAATTGTTCCACTCCAAACTATAAAAAAATCCAAAATTGAAAACCGATTTTTTCATTAGTCTTTTTTTAT
TTTTCTTTAAAAAAACAAAA

Product: Putative hydrolase of the metallo-beta-lactamase superfamily

Products: NA

Alternate protein names: RNase J2 [H]

Number of amino acids: Translated: 561; Mature: 561

Protein sequence:

>561_residues
MIDIKFFALGGLGENGKNFYLLQINESCFIIDAGLKYPSVSLYGIDAMIADYHKLESMKDKIKGVFLTSAFETNLGAVPY
FIKEYNLPIYTSYFTMEVLKNYFASHKINYQNLNLNVIKTNEILRFKDVEISFFATSQLIPETLGISFQTSLGAIVYTGE
LKSLESQNQFFQTNLTQLTKSTQQKVLAFLPASQRAFNYSYDESQNNFDHKISNYFINYSLKPKGIIVVASLAPDLFKIQ
KAITLACKLNFKVAILGNENEAIIDVALKKEFLKIPDANFVKLNTFEEHTKHNQLVVFLFGKHFATLQRLQQMANKTDPK
IHLNSQDLILLMSQDMAGIAKMQSQTLDTLSRHNIKSHLLIKDLSLSESNYEQNLKIMLNFLKPRYIIPVMGEYRHQYQV
KKIAQKNGFKSNQIFLLENGSIWRASSDKEPFVENKVFSLNEILIDGTPVADGKEFIMKDREFLAADGVVILVVNVNAKY
KKIVGEPKIVSKGFLEQTETNNIFAKLKDVFDEQSAVFLTNKYLKWNDFKKHIRESISKFLFKETKKRPIIIPIFISVRN
E

Sequences:

>Translated_561_residues
MIDIKFFALGGLGENGKNFYLLQINESCFIIDAGLKYPSVSLYGIDAMIADYHKLESMKDKIKGVFLTSAFETNLGAVPY
FIKEYNLPIYTSYFTMEVLKNYFASHKINYQNLNLNVIKTNEILRFKDVEISFFATSQLIPETLGISFQTSLGAIVYTGE
LKSLESQNQFFQTNLTQLTKSTQQKVLAFLPASQRAFNYSYDESQNNFDHKISNYFINYSLKPKGIIVVASLAPDLFKIQ
KAITLACKLNFKVAILGNENEAIIDVALKKEFLKIPDANFVKLNTFEEHTKHNQLVVFLFGKHFATLQRLQQMANKTDPK
IHLNSQDLILLMSQDMAGIAKMQSQTLDTLSRHNIKSHLLIKDLSLSESNYEQNLKIMLNFLKPRYIIPVMGEYRHQYQV
KKIAQKNGFKSNQIFLLENGSIWRASSDKEPFVENKVFSLNEILIDGTPVADGKEFIMKDREFLAADGVVILVVNVNAKY
KKIVGEPKIVSKGFLEQTETNNIFAKLKDVFDEQSAVFLTNKYLKWNDFKKHIRESISKFLFKETKKRPIIIPIFISVRN
E
>Mature_561_residues
MIDIKFFALGGLGENGKNFYLLQINESCFIIDAGLKYPSVSLYGIDAMIADYHKLESMKDKIKGVFLTSAFETNLGAVPY
FIKEYNLPIYTSYFTMEVLKNYFASHKINYQNLNLNVIKTNEILRFKDVEISFFATSQLIPETLGISFQTSLGAIVYTGE
LKSLESQNQFFQTNLTQLTKSTQQKVLAFLPASQRAFNYSYDESQNNFDHKISNYFINYSLKPKGIIVVASLAPDLFKIQ
KAITLACKLNFKVAILGNENEAIIDVALKKEFLKIPDANFVKLNTFEEHTKHNQLVVFLFGKHFATLQRLQQMANKTDPK
IHLNSQDLILLMSQDMAGIAKMQSQTLDTLSRHNIKSHLLIKDLSLSESNYEQNLKIMLNFLKPRYIIPVMGEYRHQYQV
KKIAQKNGFKSNQIFLLENGSIWRASSDKEPFVENKVFSLNEILIDGTPVADGKEFIMKDREFLAADGVVILVVNVNAKY
KKIVGEPKIVSKGFLEQTETNNIFAKLKDVFDEQSAVFLTNKYLKWNDFKKHIRESISKFLFKETKKRPIIIPIFISVRN
E

Specific function: Unknown

COG id: COG0595

COG function: function code R; Predicted hydrolase of the metallo-beta-lactamase superfamily

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. RNA-metabolizing metallo-beta-lactamase-like family. RNase J subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR011108
- InterPro:   IPR004613 [H]

Pfam domain/function: PF00753 Lactamase_B; PF07521 RMMBL [H]

EC number: NA

Molecular weight: Translated: 64337; Mature: 64337

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDIKFFALGGLGENGKNFYLLQINESCFIIDAGLKYPSVSLYGIDAMIADYHKLESMKD
CEEEEEEEECCCCCCCCEEEEEEECCCEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHH
KIKGVFLTSAFETNLGAVPYFIKEYNLPIYTSYFTMEVLKNYFASHKINYQNLNLNVIKT
HHCEEEEEEECCCCCCCCCCEEECCCCCEEEHHHHHHHHHHHHHHCCCEEEEEEEEEEEC
NEILRFKDVEISFFATSQLIPETLGISFQTSLGAIVYTGELKSLESQNQFFQTNLTQLTK
CCEEEEEEEEEEEEECCHHCHHHHCCEEECCCCEEEEECCHHCCHHHHHHHHHHHHHHHH
STQQKVLAFLPASQRAFNYSYDESQNNFDHKISNYFINYSLKPKGIIVVASLAPDLFKIQ
HHHHHEEEECCCCCCEECCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEEECCCHHHHHH
KAITLACKLNFKVAILGNENEAIIDVALKKEFLKIPDANFVKLNTFEEHTKHNQLVVFLF
HHEEEEEEEEEEEEEEECCCCEEEEEEEHHHHHCCCCCCEEEEECCHHHCCCCCEEEEEE
GKHFATLQRLQQMANKTDPKIHLNSQDLILLMSQDMAGIAKMQSQTLDTLSRHNIKSHLL
CCHHHHHHHHHHHHCCCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEE
IKDLSLSESNYEQNLKIMLNFLKPRYIIPVMGEYRHQYQVKKIAQKNGFKSNQIFLLENG
EEECCCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEECC
SIWRASSDKEPFVENKVFSLNEILIDGTPVADGKEFIMKDREFLAADGVVILVVNVNAKY
CEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHCCHHEECCCEEEEEEECCCHH
KKIVGEPKIVSKGFLEQTETNNIFAKLKDVFDEQSAVFLTNKYLKWNDFKKHIRESISKF
HHHCCCCCCHHCCCHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHH
LFKETKKRPIIIPIFISVRNE
HHHHCCCCCEEEEEEEEEECC
>Mature Secondary Structure
MIDIKFFALGGLGENGKNFYLLQINESCFIIDAGLKYPSVSLYGIDAMIADYHKLESMKD
CEEEEEEEECCCCCCCCEEEEEEECCCEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHH
KIKGVFLTSAFETNLGAVPYFIKEYNLPIYTSYFTMEVLKNYFASHKINYQNLNLNVIKT
HHCEEEEEEECCCCCCCCCCEEECCCCCEEEHHHHHHHHHHHHHHCCCEEEEEEEEEEEC
NEILRFKDVEISFFATSQLIPETLGISFQTSLGAIVYTGELKSLESQNQFFQTNLTQLTK
CCEEEEEEEEEEEEECCHHCHHHHCCEEECCCCEEEEECCHHCCHHHHHHHHHHHHHHHH
STQQKVLAFLPASQRAFNYSYDESQNNFDHKISNYFINYSLKPKGIIVVASLAPDLFKIQ
HHHHHEEEECCCCCCEECCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEEECCCHHHHHH
KAITLACKLNFKVAILGNENEAIIDVALKKEFLKIPDANFVKLNTFEEHTKHNQLVVFLF
HHEEEEEEEEEEEEEEECCCCEEEEEEEHHHHHCCCCCCEEEEECCHHHCCCCCEEEEEE
GKHFATLQRLQQMANKTDPKIHLNSQDLILLMSQDMAGIAKMQSQTLDTLSRHNIKSHLL
CCHHHHHHHHHHHHCCCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEE
IKDLSLSESNYEQNLKIMLNFLKPRYIIPVMGEYRHQYQVKKIAQKNGFKSNQIFLLENG
EEECCCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEECC
SIWRASSDKEPFVENKVFSLNEILIDGTPVADGKEFIMKDREFLAADGVVILVVNVNAKY
CEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHCCHHEECCCEEEEEEECCCHH
KKIVGEPKIVSKGFLEQTETNNIFAKLKDVFDEQSAVFLTNKYLKWNDFKKHIRESISKF
HHHCCCCCCHHCCCHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHH
LFKETKKRPIIIPIFISVRNE
HHHHCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA