Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197120403

Identifier: 197120403

GI number: 197120403

Start: 4597300

End: 4597734

Strand: Direct

Name: 197120403

Synonym: Gbem_4044

Alternate gene names: NA

Gene position: 4597300-4597734 (Clockwise)

Preceding gene: 197120402

Following gene: 197120404

Centisome position: 99.61

GC content: 61.15

Gene sequence:

>435_bases
ATGAGGGACCCGTTCCACGATCTCCATCATCAAGAAGCGAGCATCACCTCACACATCAGACTCATCTCCGAAGGGGGCAG
TTCCCATGCCGGCAGTGTCGAGCTGGTTTGCATCGACTCCATCCACGCCACCCAGACCTGCACGACCGAATCCCAGCACA
GCGGCTATCGCTCAGCTACCGCGTGCAACGCGGCCACCCCTTTGGAAATATCGTTATGCTGCATCGGCGTGGAACACGCC
CAGGAACTGGACCATCAGTCGATCCCCGAGGTACTCAGGCAGCGCTTGGAGCGGCTTGGGAAGGCTCTCGGTGAAGGCGC
CAGCGTGAGCGTCAGGAACCCCGGCAGCCTTTGGTCCATAAGCGACGCTAAGCGCCGGTTCTCGGCAAGAAGAGTCGCGG
CACGCATAGCGGTGTACCCCGACCCTGAGCCTTGA

Upstream 100 bases:

>100_bases
TGCTCGTGGCAGCAGGATTATTCCTGGGAAGGGCCGTCGGCAGCGCCGCGGCAGCCATCAGGCTCTAATGATCGACATTC
TGTGGTAGGGAGAACGTATC

Downstream 100 bases:

>100_bases
AGAAAATCTCACCCGATTAGACACCGCTGGCCGGTCCTTTCTGCACATAGCTGCCACGGTGCTTACCAGACGAAAACCAC
AGGAGAGAGCAATGGGCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MRDPFHDLHHQEASITSHIRLISEGGSSHAGSVELVCIDSIHATQTCTTESQHSGYRSATACNAATPLEISLCCIGVEHA
QELDHQSIPEVLRQRLERLGKALGEGASVSVRNPGSLWSISDAKRRFSARRVAARIAVYPDPEP

Sequences:

>Translated_144_residues
MRDPFHDLHHQEASITSHIRLISEGGSSHAGSVELVCIDSIHATQTCTTESQHSGYRSATACNAATPLEISLCCIGVEHA
QELDHQSIPEVLRQRLERLGKALGEGASVSVRNPGSLWSISDAKRRFSARRVAARIAVYPDPEP
>Mature_144_residues
MRDPFHDLHHQEASITSHIRLISEGGSSHAGSVELVCIDSIHATQTCTTESQHSGYRSATACNAATPLEISLCCIGVEHA
QELDHQSIPEVLRQRLERLGKALGEGASVSVRNPGSLWSISDAKRRFSARRVAARIAVYPDPEP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15649; Mature: 15649

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDPFHDLHHQEASITSHIRLISEGGSSHAGSVELVCIDSIHATQTCTTESQHSGYRSAT
CCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
ACNAATPLEISLCCIGVEHAQELDHQSIPEVLRQRLERLGKALGEGASVSVRNPGSLWSI
CCCCCCCCEEEEEEEEHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEC
SDAKRRFSARRVAARIAVYPDPEP
HHHHHHHHHHHHHHHEEECCCCCC
>Mature Secondary Structure
MRDPFHDLHHQEASITSHIRLISEGGSSHAGSVELVCIDSIHATQTCTTESQHSGYRSAT
CCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
ACNAATPLEISLCCIGVEHAQELDHQSIPEVLRQRLERLGKALGEGASVSVRNPGSLWSI
CCCCCCCCEEEEEEEEHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEC
SDAKRRFSARRVAARIAVYPDPEP
HHHHHHHHHHHHHHHEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA