| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is galT [H]
Identifier: 197120376
GI number: 197120376
Start: 4560504
End: 4561589
Strand: Direct
Name: galT [H]
Synonym: Gbem_4017
Alternate gene names: 197120376
Gene position: 4560504-4561589 (Clockwise)
Preceding gene: 308535400
Following gene: 197120377
Centisome position: 98.82
GC content: 67.96
Gene sequence:
>1086_bases ATGCTCTACAGGCGAGAGATGTTGAAGACTGACGGACGGAGCCTCACCCTTTACGGCCGTGGTCCCATCGAGGTGCTGGG GGAGGCCCCGAGCCCGAACCGGGAGCCGCTTGCCGCGAACCCCCACCTGCGCTGGCACCCTCTGCGCGGGGAATGGGTCG CCTATGCGAGCTACCGCCAGGGGCGGACCTTCATGCCCCCTCCCGAGTACAACCCGCTCGCCCCGACGACCGACCCGGAC AACCCTACCGAGCTCCCCCAGGGGAACTACCAGGTGGCGGTCTTCGACAACCGCTTCCCCTCGCTCTCCCCCGTCGCCCA CCACCCGCCCCAAAGCTACGTCCCCACCGCCCCCGGGCGAGGCAAGTGCGAGGTGGTGGTCTTCGGCAAGGACCCGGCTC GGTCGCTTTCGGGGCTCCCGCTGGACCACATCGAGCTACTCATGGAGGTATGGGGGGACCGGGTGGAGCGGCTTGGGGAA GACCCGGACATCAACTACGTGCTTCCCTTCGAGAACAAGGGGATCGAGGTCGGGGTGACTCTGCACCACCCGCACGGCCA GATCTACGCCTATCCCTTCGTCCCCCCGGTGCCGCAGCGGATGCAGGTTCAGGAGCTGTCCTACTTCCAGGTGCAGGGAG CGCCGCTTCTGGAGGGGCTGATCGCCGCAGAGACCGTCTCAGGCGAGCGGATCCTCTACCTCGGGGAGCACGCCATCTCC TTCCTACCCCCCTGGGCCCGCTACCCCTACGAGGTCTGGGTCGCCCCCCGGCGCGCCGTCCCCGGCTTTCCCCAGCTCAC CCCCGAGGTCCGCGCCGACCTGGCGCGAGCGCTCAAGACCACCCTCCTTAAATACGACGGTCTCTGGCAGCGCCCCTTCC CCTACCTGATGGCCTGGTACGGCGCCCCGACAGACGGGGAGCCGCACCCCGAGTGCCACCTGCACGCCGAGTTTTACCCC CCCTACCGATCCAGCGACCGGCTCAAGTACCTGGCCGGGACGGAGCTTGCCGCCGGGATGTTCGCCAACGACGCACTCCC CGAGCAGAAGGCGAAGGAACTTCAGGAAGTGGAGGTGACGCTATGA
Upstream 100 bases:
>100_bases CGCGCTCTTCTGGGAAAGCACCTGAGAATCGATCCCCATCCCCTGCAAAATTTCACCCGTCCACCCCATGCGCCGATTTC GCGCGCATATCGGAGGAAGC
Downstream 100 bases:
>100_bases ACGGCACCGCGCGCGCGGAGGAGATGGCCGTAAAGATCCGCCTGGTCCGGGAGCTGCTCGGCGAGGGAAGGGTGCTGAGG CTCAAGGGGATCGACTGGTT
Product: galactose-1-phosphate uridylyltransferase
Products: NA
Alternate protein names: Gal-1-P uridylyltransferase; UDP-glucose--hexose-1-phosphate uridylyltransferase [H]
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MLYRREMLKTDGRSLTLYGRGPIEVLGEAPSPNREPLAANPHLRWHPLRGEWVAYASYRQGRTFMPPPEYNPLAPTTDPD NPTELPQGNYQVAVFDNRFPSLSPVAHHPPQSYVPTAPGRGKCEVVVFGKDPARSLSGLPLDHIELLMEVWGDRVERLGE DPDINYVLPFENKGIEVGVTLHHPHGQIYAYPFVPPVPQRMQVQELSYFQVQGAPLLEGLIAAETVSGERILYLGEHAIS FLPPWARYPYEVWVAPRRAVPGFPQLTPEVRADLARALKTTLLKYDGLWQRPFPYLMAWYGAPTDGEPHPECHLHAEFYP PYRSSDRLKYLAGTELAAGMFANDALPEQKAKELQEVEVTL
Sequences:
>Translated_361_residues MLYRREMLKTDGRSLTLYGRGPIEVLGEAPSPNREPLAANPHLRWHPLRGEWVAYASYRQGRTFMPPPEYNPLAPTTDPD NPTELPQGNYQVAVFDNRFPSLSPVAHHPPQSYVPTAPGRGKCEVVVFGKDPARSLSGLPLDHIELLMEVWGDRVERLGE DPDINYVLPFENKGIEVGVTLHHPHGQIYAYPFVPPVPQRMQVQELSYFQVQGAPLLEGLIAAETVSGERILYLGEHAIS FLPPWARYPYEVWVAPRRAVPGFPQLTPEVRADLARALKTTLLKYDGLWQRPFPYLMAWYGAPTDGEPHPECHLHAEFYP PYRSSDRLKYLAGTELAAGMFANDALPEQKAKELQEVEVTL >Mature_361_residues MLYRREMLKTDGRSLTLYGRGPIEVLGEAPSPNREPLAANPHLRWHPLRGEWVAYASYRQGRTFMPPPEYNPLAPTTDPD NPTELPQGNYQVAVFDNRFPSLSPVAHHPPQSYVPTAPGRGKCEVVVFGKDPARSLSGLPLDHIELLMEVWGDRVERLGE DPDINYVLPFENKGIEVGVTLHHPHGQIYAYPFVPPVPQRMQVQELSYFQVQGAPLLEGLIAAETVSGERILYLGEHAIS FLPPWARYPYEVWVAPRRAVPGFPQLTPEVRADLARALKTTLLKYDGLWQRPFPYLMAWYGAPTDGEPHPECHLHAEFYP PYRSSDRLKYLAGTELAAGMFANDALPEQKAKELQEVEVTL
Specific function: Galactose metabolism; second step. [C]
COG id: COG1085
COG function: function code C; Galactose-1-phosphate uridylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the galactose-1-phosphate uridylyltransferase type 1 family [H]
Homologues:
Organism=Homo sapiens, GI22165416, Length=335, Percent_Identity=34.6268656716418, Blast_Score=172, Evalue=4e-43, Organism=Escherichia coli, GI1786973, Length=335, Percent_Identity=33.4328358208955, Blast_Score=171, Evalue=5e-44, Organism=Caenorhabditis elegans, GI17557105, Length=344, Percent_Identity=30.2325581395349, Blast_Score=158, Evalue=4e-39, Organism=Saccharomyces cerevisiae, GI6319492, Length=354, Percent_Identity=26.271186440678, Blast_Score=116, Evalue=5e-27, Organism=Drosophila melanogaster, GI24582285, Length=342, Percent_Identity=33.3333333333333, Blast_Score=159, Evalue=3e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001937 - InterPro: IPR019779 - InterPro: IPR005850 - InterPro: IPR005849 - InterPro: IPR011146 - InterPro: IPR011151 [H]
Pfam domain/function: PF02744 GalP_UDP_tr_C; PF01087 GalP_UDP_transf [H]
EC number: =2.7.7.12 [H]
Molecular weight: Translated: 40745; Mature: 40745
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: PS00117 GAL_P_UDP_TRANSF_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYRREMLKTDGRSLTLYGRGPIEVLGEAPSPNREPLAANPHLRWHPLRGEWVAYASYRQ CCCHHHHHHCCCCEEEEEECCCHHEECCCCCCCCCCCCCCCCEEEECCCCCEEEEEEHHC GRTFMPPPEYNPLAPTTDPDNPTELPQGNYQVAVFDNRFPSLSPVAHHPPQSYVPTAPGR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC GKCEVVVFGKDPARSLSGLPLDHIELLMEVWGDRVERLGEDPDINYVLPFENKGIEVGVT CEEEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEE LHHPHGQIYAYPFVPPVPQRMQVQELSYFQVQGAPLLEGLIAAETVSGERILYLGEHAIS EECCCCCEEEECCCCCCCCHHHHHHCCEEEECCCHHHHHHHHHEECCCCEEEEECCHHHH FLPPWARYPYEVWVAPRRAVPGFPQLTPEVRADLARALKTTLLKYDGLWQRPFPYLMAWY HCCCHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEE GAPTDGEPHPECHLHAEFYPPYRSSDRLKYLAGTELAAGMFANDALPEQKAKELQEVEVT CCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHHEEC L C >Mature Secondary Structure MLYRREMLKTDGRSLTLYGRGPIEVLGEAPSPNREPLAANPHLRWHPLRGEWVAYASYRQ CCCHHHHHHCCCCEEEEEECCCHHEECCCCCCCCCCCCCCCCEEEECCCCCEEEEEEHHC GRTFMPPPEYNPLAPTTDPDNPTELPQGNYQVAVFDNRFPSLSPVAHHPPQSYVPTAPGR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC GKCEVVVFGKDPARSLSGLPLDHIELLMEVWGDRVERLGEDPDINYVLPFENKGIEVGVT CEEEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEE LHHPHGQIYAYPFVPPVPQRMQVQELSYFQVQGAPLLEGLIAAETVSGERILYLGEHAIS EECCCCCEEEECCCCCCCCHHHHHHCCEEEECCCHHHHHHHHHEECCCCEEEEECCHHHH FLPPWARYPYEVWVAPRRAVPGFPQLTPEVRADLARALKTTLLKYDGLWQRPFPYLMAWY HCCCHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEE GAPTDGEPHPECHLHAEFYPPYRSSDRLKYLAGTELAAGMFANDALPEQKAKELQEVEVT CCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHHEEC L C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9741105; 10360571 [H]