Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197120373

Identifier: 197120373

GI number: 197120373

Start: 4554897

End: 4555883

Strand: Direct

Name: 197120373

Synonym: Gbem_4012

Alternate gene names: NA

Gene position: 4554897-4555883 (Clockwise)

Preceding gene: 197120371

Following gene: 197120374

Centisome position: 98.69

GC content: 62.61

Gene sequence:

>987_bases
ATGAACACCCTGCAGATCAGTTACCTGCTGGCCGCGTTGTCAGTCCCCGTGGTGCTGCAATTTCATCTCCTTCCCGCCGC
GTTCGCCGGGCTTGCCGTGTACGTGCTGACCGCGAAGCTTGCTCCCATGCTTCCGCTGCGCTGGGGGAGCCTGACCCAGA
AGGTCGCCCTGGCAGGGATCATCCTGTTCGTCATCGCCCTGGTCTCCAGCATCTGCCTCGGGCTCTGGTCGTTTTTGCGC
GGCCACCACGGGATGGCGAACCTGCTCAACATGGCGGCCGAGACCCTGGAAAACCTGAAGCGGACCCTCCCGGAGGATCT
CACCGCGGCGCTTCCCGACACCGTCGACGAACTGCGCGAACAGATAACCAACATGCTGCGAGAGCACGGGAAGAACATCT
CCTCCGTCGGCATCTCCGGAGTCAAGACCTTCGCCCACCTCATCCTCGGCATGGTGGTGGGAAGCCTCGCGGTGCTGCAC
CGCTTCAACAAGGAAAACGGGTTCCCCCCCCTGGCCTCCGACCTGCACGCGAGGCTGATCAACCTGGCCGATTCCTTCGA
CAAGGTGGTCTTCGCCCAGGTGAAGATTTCCGCGCTCAATACCGTTCTCACCGCGATCTACCTCGCCGTGGTGCTCCCCA
TCTTCGGGGTCTACCTCCCCATGGTCACCCTCCTGGTCCTCCTCACCTTCGTGGCCGGCCTGCTGCCGGTGGTGGGGAAC
CTCATCTCCAACTTCACCATCGTGCTGATCAGCCTCGGCGTCTCCCCGATGGTCGGTATCGCCTCGCTGGCGTTCCTGAT
CGTGATCCACAAGCTGGAGTACTTCACCAACGCGAGGATCGTGGGGGGCCAAGTCAAGGCCAGCGTCTGGGAGCTTTTGT
GCGCCATGCTCTTCATGGAAGCGATCTTCGGCATGGCCGGCCTGGTGGCGGCCCCCGTGGTTTATGCCTGGCTCAAGACC
GAGCTCAAGGCGAAGCGGCTGGTATAA

Upstream 100 bases:

>100_bases
TACTCTCGACTATGGAACTATACAGATTTATCTGGACCGAGAGACCTGAGTGATAGTAAAAATGGTTGTCGTGTCAAATG
CTTCCCTGGAGAGTGGATCC

Downstream 100 bases:

>100_bases
GCGACGGCAGGTAGGCATCCGCTGCATTTTTAGTATCTTTAACGGATGCAAGCTACCAATTTCACATCCACCATTATCCC
CAGCAGGCGCGGCCGGGATT

Product: membrane protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MNTLQISYLLAALSVPVVLQFHLLPAAFAGLAVYVLTAKLAPMLPLRWGSLTQKVALAGIILFVIALVSSICLGLWSFLR
GHHGMANLLNMAAETLENLKRTLPEDLTAALPDTVDELREQITNMLREHGKNISSVGISGVKTFAHLILGMVVGSLAVLH
RFNKENGFPPLASDLHARLINLADSFDKVVFAQVKISALNTVLTAIYLAVVLPIFGVYLPMVTLLVLLTFVAGLLPVVGN
LISNFTIVLISLGVSPMVGIASLAFLIVIHKLEYFTNARIVGGQVKASVWELLCAMLFMEAIFGMAGLVAAPVVYAWLKT
ELKAKRLV

Sequences:

>Translated_328_residues
MNTLQISYLLAALSVPVVLQFHLLPAAFAGLAVYVLTAKLAPMLPLRWGSLTQKVALAGIILFVIALVSSICLGLWSFLR
GHHGMANLLNMAAETLENLKRTLPEDLTAALPDTVDELREQITNMLREHGKNISSVGISGVKTFAHLILGMVVGSLAVLH
RFNKENGFPPLASDLHARLINLADSFDKVVFAQVKISALNTVLTAIYLAVVLPIFGVYLPMVTLLVLLTFVAGLLPVVGN
LISNFTIVLISLGVSPMVGIASLAFLIVIHKLEYFTNARIVGGQVKASVWELLCAMLFMEAIFGMAGLVAAPVVYAWLKT
ELKAKRLV
>Mature_328_residues
MNTLQISYLLAALSVPVVLQFHLLPAAFAGLAVYVLTAKLAPMLPLRWGSLTQKVALAGIILFVIALVSSICLGLWSFLR
GHHGMANLLNMAAETLENLKRTLPEDLTAALPDTVDELREQITNMLREHGKNISSVGISGVKTFAHLILGMVVGSLAVLH
RFNKENGFPPLASDLHARLINLADSFDKVVFAQVKISALNTVLTAIYLAVVLPIFGVYLPMVTLLVLLTFVAGLLPVVGN
LISNFTIVLISLGVSPMVGIASLAFLIVIHKLEYFTNARIVGGQVKASVWELLCAMLFMEAIFGMAGLVAAPVVYAWLKT
ELKAKRLV

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35388; Mature: 35388

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLQISYLLAALSVPVVLQFHLLPAAFAGLAVYVLTAKLAPMLPLRWGSLTQKVALAGI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
ILFVIALVSSICLGLWSFLRGHHGMANLLNMAAETLENLKRTLPEDLTAALPDTVDELRE
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHH
QITNMLREHGKNISSVGISGVKTFAHLILGMVVGSLAVLHRFNKENGFPPLASDLHARLI
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
NLADSFDKVVFAQVKISALNTVLTAIYLAVVLPIFGVYLPMVTLLVLLTFVAGLLPVVGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LISNFTIVLISLGVSPMVGIASLAFLIVIHKLEYFTNARIVGGQVKASVWELLCAMLFME
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHH
AIFGMAGLVAAPVVYAWLKTELKAKRLV
HHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA