Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197120337

Identifier: 197120337

GI number: 197120337

Start: 4513808

End: 4514383

Strand: Direct

Name: 197120337

Synonym: Gbem_3976

Alternate gene names: NA

Gene position: 4513808-4514383 (Clockwise)

Preceding gene: 308535394

Following gene: 308535395

Centisome position: 97.8

GC content: 60.59

Gene sequence:

>576_bases
ATGGCCTTTTCATCAATCCAGTCCGCATCCCACTTGCTTCCCGTGTTTAAGCTTTTCCTGCTTCCTGTGGGCGGCGGAAT
ACCCGCCGGCGTTCTGCTGGCCCGCACCCAAGGCCTGGCTTGGCCCGTCACCGCAGGGCTCTACCTGGTTTCGGATGTGG
TCCTTGCCCTCATGTTTGAACCGGTTCTACGGCTTTTCGCCGCAGTGATAGGGAATATCCCTTTCCTGGCGCGTTTTAGC
GCGGCATTAAAGGCTGCCACGGCGCGCAGCGTGGCGCATGTCAGCGGCACCAGCACCGGCCCCCTTGCACTCGTCATGAT
AGCCTTCGGCGTAGATCCGATGACCGGACGCGCCACTGCGCTTGCCTCGGGCCACGGATTCCTCGCCGGCTGGGCCTTCG
CAATCGCAGGAGATATGCTCTATTTCGCGGTGATCGCCCTCACCACCTTGCGCCTCAACTCCTACTTCAAAGACCCGAAC
ACCACAATGCTGATCGTCTTGGCCGCGATGTTCCTCGTGCCTGTGCTGGTTCGCAAGTTACGGGACCACCGAGAGAGATG
GCGTGCTGGGTCTTGA

Upstream 100 bases:

>100_bases
CTGACAACTTCCCTTTGCTCCCCACTTTTGCTAACATGCCGCAGTCCTTCAAGAACCAACCTGGCATTGCCCTGCATTGT
GCTTACCATCGAGACGCTTC

Downstream 100 bases:

>100_bases
ATTATAACCGCTGCCGTGTTTCGCTTTTTACCTCTACTTCGGAATTCCGGGGACATAATACCTATAATTTTGCAACACAT
GAGACGCAGAAGAAGAATTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MAFSSIQSASHLLPVFKLFLLPVGGGIPAGVLLARTQGLAWPVTAGLYLVSDVVLALMFEPVLRLFAAVIGNIPFLARFS
AALKAATARSVAHVSGTSTGPLALVMIAFGVDPMTGRATALASGHGFLAGWAFAIAGDMLYFAVIALTTLRLNSYFKDPN
TTMLIVLAAMFLVPVLVRKLRDHRERWRAGS

Sequences:

>Translated_191_residues
MAFSSIQSASHLLPVFKLFLLPVGGGIPAGVLLARTQGLAWPVTAGLYLVSDVVLALMFEPVLRLFAAVIGNIPFLARFS
AALKAATARSVAHVSGTSTGPLALVMIAFGVDPMTGRATALASGHGFLAGWAFAIAGDMLYFAVIALTTLRLNSYFKDPN
TTMLIVLAAMFLVPVLVRKLRDHRERWRAGS
>Mature_190_residues
AFSSIQSASHLLPVFKLFLLPVGGGIPAGVLLARTQGLAWPVTAGLYLVSDVVLALMFEPVLRLFAAVIGNIPFLARFSA
ALKAATARSVAHVSGTSTGPLALVMIAFGVDPMTGRATALASGHGFLAGWAFAIAGDMLYFAVIALTTLRLNSYFKDPNT
TMLIVLAAMFLVPVLVRKLRDHRERWRAGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20254; Mature: 20123

Theoretical pI: Translated: 11.44; Mature: 11.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFSSIQSASHLLPVFKLFLLPVGGGIPAGVLLARTQGLAWPVTAGLYLVSDVVLALMFE
CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
PVLRLFAAVIGNIPFLARFSAALKAATARSVAHVSGTSTGPLALVMIAFGVDPMTGRATA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHH
LASGHGFLAGWAFAIAGDMLYFAVIALTTLRLNSYFKDPNTTMLIVLAAMFLVPVLVRKL
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
RDHRERWRAGS
HHHHHHCCCCC
>Mature Secondary Structure 
AFSSIQSASHLLPVFKLFLLPVGGGIPAGVLLARTQGLAWPVTAGLYLVSDVVLALMFE
CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
PVLRLFAAVIGNIPFLARFSAALKAATARSVAHVSGTSTGPLALVMIAFGVDPMTGRATA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHH
LASGHGFLAGWAFAIAGDMLYFAVIALTTLRLNSYFKDPNTTMLIVLAAMFLVPVLVRKL
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
RDHRERWRAGS
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA