| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is cheB-1 [H]
Identifier: 197120306
GI number: 197120306
Start: 4482667
End: 4483743
Strand: Direct
Name: cheB-1 [H]
Synonym: Gbem_3945
Alternate gene names: 197120306
Gene position: 4482667-4483743 (Clockwise)
Preceding gene: 197120305
Following gene: 197120319
Centisome position: 97.13
GC content: 64.44
Gene sequence:
>1077_bases ATGATTCCCGACGGCCGGAACAAATTGAGGGTACTCATCGTCGACGACTCCTCCTTCATGCGCATGGCGATCCGCGGCAT TCTCGCCAAGGCGCCGGGGATAGAAGTGGTCGGAATCGCAGCGGACGGTTTGGAAGGGGTGGACAAGGCGCTGGCGCTGA AGCCCGACCTGATCACCATGGACGTGGAGATGCCCCGAATGGACGGCATCGCTGCCCTGAAGCAGATCATGGCCAAGCAG CCGACCCGGGTGCTTATGGTCTCAACGCTCACCAGCGAGGGGGCGCGCGCCACCTTCGAGGCGCTGGAGGCAGGCGCCAT CGACTACGTCCCCAAAAACGTGAGCGACTGCAAGGATGCCCAGGCTGTCTTCCAGGCGGCGCTACTCGCCAAGGTTCAGG AGGCTGCCCTTTCCGCCCCCCCGAAAAAAGCCGGGATAGGCGCAGCTGCCCCGAGATTGGTGCAGCCGCCCCAGGTCCGT CCTTCTCACTTTGCGAACCGCCGCATCGGCTGTGTCGGCATCGGCGCCTCCACCGGCGGCCCGGTCGCGCTCCAGGAGGT GCTCTCGCGCGTACCGGTCAACTTCCCGCACGGCATCGTGGTCGCCATTCACATGCCCAAGGCCTTCACCGGCCCCTATG CGGACAGGCTGAACGCCAAGTGCTCCCTTTCCATCAGGGAGGCGGCCAACGGCGACGTGGTGAAGGGGGGCGAGGTGTTG ATCGCGCCGGGGGGGCAGCACACCACCTTGGTGCGCCAAGGGAGCAACATCGTGGTACGCATCGCTCCCAGCGCCGATTT CCCGCAGTACGTCTATATTCCCAGCGTGGACCAGATGCTGACCTCGCTCTGCGACGCCAGCAACGGCTCGATGCTGGGGG TGATACTGACCGGAATGGGGAACGACGGGTTCAAGGGGATGAAGCACCTGAAGGAGAAGGGAGGCCTTACCCTGGTGCAG AACGAGGCGACCTCCACCATCTACGGCATGCCGCGGGCCTGCATCGAGGGGAGCGTCGCCGACCTGGTGCTGCCGTTGGA CCAGATCGGGATCGAGATAGGAAAGATGATCGGCTGA
Upstream 100 bases:
>100_bases TCGATGTCGAGCGCTTCTGCTACGAACTGGACGACCGGGTTCCCGAGATTCAGGACATGGTGAAATCGATCTTCCAGGGG ATAGGAGCTTAGGAGCTATC
Downstream 100 bases:
>100_bases GGCGGCGCCTAGCGCCGCCCTCGCACCAAGAGGCCGCGCTCCGCAGCCTCCACGCTGCAGCGCGAGAAACCCTCGCGCTT CAAGCGGAATAGGATGAAAG
Product: response receiver chemotaxis protein-glutamate methylesterase CheB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MIPDGRNKLRVLIVDDSSFMRMAIRGILAKAPGIEVVGIAADGLEGVDKALALKPDLITMDVEMPRMDGIAALKQIMAKQ PTRVLMVSTLTSEGARATFEALEAGAIDYVPKNVSDCKDAQAVFQAALLAKVQEAALSAPPKKAGIGAAAPRLVQPPQVR PSHFANRRIGCVGIGASTGGPVALQEVLSRVPVNFPHGIVVAIHMPKAFTGPYADRLNAKCSLSIREAANGDVVKGGEVL IAPGGQHTTLVRQGSNIVVRIAPSADFPQYVYIPSVDQMLTSLCDASNGSMLGVILTGMGNDGFKGMKHLKEKGGLTLVQ NEATSTIYGMPRACIEGSVADLVLPLDQIGIEIGKMIG
Sequences:
>Translated_358_residues MIPDGRNKLRVLIVDDSSFMRMAIRGILAKAPGIEVVGIAADGLEGVDKALALKPDLITMDVEMPRMDGIAALKQIMAKQ PTRVLMVSTLTSEGARATFEALEAGAIDYVPKNVSDCKDAQAVFQAALLAKVQEAALSAPPKKAGIGAAAPRLVQPPQVR PSHFANRRIGCVGIGASTGGPVALQEVLSRVPVNFPHGIVVAIHMPKAFTGPYADRLNAKCSLSIREAANGDVVKGGEVL IAPGGQHTTLVRQGSNIVVRIAPSADFPQYVYIPSVDQMLTSLCDASNGSMLGVILTGMGNDGFKGMKHLKEKGGLTLVQ NEATSTIYGMPRACIEGSVADLVLPLDQIGIEIGKMIG >Mature_358_residues MIPDGRNKLRVLIVDDSSFMRMAIRGILAKAPGIEVVGIAADGLEGVDKALALKPDLITMDVEMPRMDGIAALKQIMAKQ PTRVLMVSTLTSEGARATFEALEAGAIDYVPKNVSDCKDAQAVFQAALLAKVQEAALSAPPKKAGIGAAAPRLVQPPQVR PSHFANRRIGCVGIGASTGGPVALQEVLSRVPVNFPHGIVVAIHMPKAFTGPYADRLNAKCSLSIREAANGDVVKGGEVL IAPGGQHTTLVRQGSNIVVRIAPSADFPQYVYIPSVDQMLTSLCDASNGSMLGVILTGMGNDGFKGMKHLKEKGGLTLVQ NEATSTIYGMPRACIEGSVADLVLPLDQIGIEIGKMIG
Specific function: Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR [H]
COG id: COG2201
COG function: function code NT; Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788192, Length=339, Percent_Identity=38.9380530973451, Blast_Score=218, Evalue=6e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR008248 - InterPro: IPR000673 - InterPro: IPR001789 [H]
Pfam domain/function: PF01339 CheB_methylest; PF00072 Response_reg [H]
EC number: =3.1.1.61 [H]
Molecular weight: Translated: 37506; Mature: 37506
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50122 CHEB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPDGRNKLRVLIVDDSSFMRMAIRGILAKAPGIEVVGIAADGLEGVDKALALKPDLITM CCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCCEEEE DVEMPRMDGIAALKQIMAKQPTRVLMVSTLTSEGARATFEALEAGAIDYVPKNVSDCKDA EECCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHH QAVFQAALLAKVQEAALSAPPKKAGIGAAAPRLVQPPQVRPSHFANRRIGCVGIGASTGG HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCEEEEEECCCCCC PVALQEVLSRVPVNFPHGIVVAIHMPKAFTGPYADRLNAKCSLSIREAANGDVVKGGEVL HHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHCCCEEEEEEHHCCCCCEEECCEEE IAPGGQHTTLVRQGSNIVVRIAPSADFPQYVYIPSVDQMLTSLCDASNGSMLGVILTGMG EECCCCEEEEEECCCCEEEEEECCCCCCCEEECCCHHHHHHHHHCCCCCCEEEEEEEECC NDGFKGMKHLKEKGGLTLVQNEATSTIYGMPRACIEGSVADLVLPLDQIGIEIGKMIG CCCHHHHHHHHHHCCEEEEECCCCCHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIPDGRNKLRVLIVDDSSFMRMAIRGILAKAPGIEVVGIAADGLEGVDKALALKPDLITM CCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCCEEEE DVEMPRMDGIAALKQIMAKQPTRVLMVSTLTSEGARATFEALEAGAIDYVPKNVSDCKDA EECCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHH QAVFQAALLAKVQEAALSAPPKKAGIGAAAPRLVQPPQVRPSHFANRRIGCVGIGASTGG HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCEEEEEECCCCCC PVALQEVLSRVPVNFPHGIVVAIHMPKAFTGPYADRLNAKCSLSIREAANGDVVKGGEVL HHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHCCCEEEEEEHHCCCCCEEECCEEE IAPGGQHTTLVRQGSNIVVRIAPSADFPQYVYIPSVDQMLTSLCDASNGSMLGVILTGMG EECCCCEEEEEECCCCEEEEEECCCCCCCEEECCCHHHHHHHHHCCCCCCEEEEEEEECC NDGFKGMKHLKEKGGLTLVQNEATSTIYGMPRACIEGSVADLVLPLDQIGIEIGKMIG CCCHHHHHHHHHHCCEEEEECCCCCHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA