| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197120251
Identifier: 197120251
GI number: 197120251
Start: 4427896
End: 4428795
Strand: Direct
Name: 197120251
Synonym: Gbem_3890
Alternate gene names: NA
Gene position: 4427896-4428795 (Clockwise)
Preceding gene: 197120239
Following gene: 197120255
Centisome position: 95.94
GC content: 56.0
Gene sequence:
>900_bases ATGCTGACAATGCAGGAAATAAAAAGCCACTATTACTTCACCGATACAGATGAGAAACTTTTAGAAGAGTTGCTTCCCCT TGCCGAGAAGAACTGCGAGGCTATGGTTGAAGAATTCTATGGCTACCTTCTCAAGATACCGGAGACGGCAGCTTTCCTGC GCGACCCCAAAGAACTGCAGAAACTGCGCAAGACCCACGCGCAGTGGTTCCTCTCGCTGTTCTGCGGCCGTTATGACAAC GGCTACATGATCACGCTGCAGAGCATCGGACAGGCGCATGTCCGCATCAAGGTGAGCGCGCACTACGTGAACGCCGCCAT GAACGTGGTGCGCAGATTCCTCATCGAACTGCTCCAGGCCAACTTCCCGGAGATCGAGGCGCGGCGCAAGTACCGCATCG CGGTGGAAAAGATCCTCGACATAAACCTCGACATCATGAGCACCTCCTACCAGGAGGAGGAGCTACGCAAGGTGTTCGTT TCGCACCGGCTGGAGTCAAAGCTCATCCACGCCGCCGAGCGTTTCACCTATGGCCTCAACCTCGTCCTGGTCGTGGCGCT GATCATCGTTTCCCTGTCGGTAGTGGGGTTGTTCTTCTGGGACTTGGTGCACGTCTTCAGCGGGAGCATGGAGAAGGGGA TCCTGTCGGCACTCGGTTCTTTGCTCATCCTATGGATGATGATCGAGCTGATGGACAACGAGATCAAGACGCTCAAGGGG GGGAAGTTCAACATCCTCATCTTCATCGGCGTGATCATAGTGGCGCTGATACGCGAAATCCTGATCTCGACGCTGCGCCA CGACGCGCTGGAAACGCAGGCCTTTTTGGCAGGGACCCTGCTCATCCTGGGCATCGTCTACTTCCTGGTCGCCAAGAGCC AGAGCCCCAACGCCCACTAG
Upstream 100 bases:
>100_bases GTCACCCGTATACGAAGGTGGTAAAAGCCATGAGCCATGCTAGTATTTACGCCTGCATGTATTGGATTAAATAAGGGAGT CAAGGCAACAGGAGCGTCAA
Downstream 100 bases:
>100_bases GGTCGCGCACCGGCCCGGTTATCAATGATCCGCGCTTAAAAAAAAGGAAAGGGCACCCTATCCGGGTGCCCTTTTCTTTT GCGTCTTTTCAGCTGCGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MLTMQEIKSHYYFTDTDEKLLEELLPLAEKNCEAMVEEFYGYLLKIPETAAFLRDPKELQKLRKTHAQWFLSLFCGRYDN GYMITLQSIGQAHVRIKVSAHYVNAAMNVVRRFLIELLQANFPEIEARRKYRIAVEKILDINLDIMSTSYQEEELRKVFV SHRLESKLIHAAERFTYGLNLVLVVALIIVSLSVVGLFFWDLVHVFSGSMEKGILSALGSLLILWMMIELMDNEIKTLKG GKFNILIFIGVIIVALIREILISTLRHDALETQAFLAGTLLILGIVYFLVAKSQSPNAH
Sequences:
>Translated_299_residues MLTMQEIKSHYYFTDTDEKLLEELLPLAEKNCEAMVEEFYGYLLKIPETAAFLRDPKELQKLRKTHAQWFLSLFCGRYDN GYMITLQSIGQAHVRIKVSAHYVNAAMNVVRRFLIELLQANFPEIEARRKYRIAVEKILDINLDIMSTSYQEEELRKVFV SHRLESKLIHAAERFTYGLNLVLVVALIIVSLSVVGLFFWDLVHVFSGSMEKGILSALGSLLILWMMIELMDNEIKTLKG GKFNILIFIGVIIVALIREILISTLRHDALETQAFLAGTLLILGIVYFLVAKSQSPNAH >Mature_299_residues MLTMQEIKSHYYFTDTDEKLLEELLPLAEKNCEAMVEEFYGYLLKIPETAAFLRDPKELQKLRKTHAQWFLSLFCGRYDN GYMITLQSIGQAHVRIKVSAHYVNAAMNVVRRFLIELLQANFPEIEARRKYRIAVEKILDINLDIMSTSYQEEELRKVFV SHRLESKLIHAAERFTYGLNLVLVVALIIVSLSVVGLFFWDLVHVFSGSMEKGILSALGSLLILWMMIELMDNEIKTLKG GKFNILIFIGVIIVALIREILISTLRHDALETQAFLAGTLLILGIVYFLVAKSQSPNAH
Specific function: Unknown
COG id: COG0840
COG function: function code NT; Methyl-accepting chemotaxis protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34271; Mature: 34271
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTMQEIKSHYYFTDTDEKLLEELLPLAEKNCEAMVEEFYGYLLKIPETAAFLRDPKELQ CCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHH KLRKTHAQWFLSLFCGRYDNGYMITLQSIGQAHVRIKVSAHYVNAAMNVVRRFLIELLQA HHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHC NFPEIEARRKYRIAVEKILDINLDIMSTSYQEEELRKVFVSHRLESKLIHAAERFTYGLN CCCCHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVLVVALIIVSLSVVGLFFWDLVHVFSGSMEKGILSALGSLLILWMMIELMDNEIKTLKG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GKFNILIFIGVIIVALIREILISTLRHDALETQAFLAGTLLILGIVYFLVAKSQSPNAH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLTMQEIKSHYYFTDTDEKLLEELLPLAEKNCEAMVEEFYGYLLKIPETAAFLRDPKELQ CCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHH KLRKTHAQWFLSLFCGRYDNGYMITLQSIGQAHVRIKVSAHYVNAAMNVVRRFLIELLQA HHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHC NFPEIEARRKYRIAVEKILDINLDIMSTSYQEEELRKVFVSHRLESKLIHAAERFTYGLN CCCCHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVLVVALIIVSLSVVGLFFWDLVHVFSGSMEKGILSALGSLLILWMMIELMDNEIKTLKG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GKFNILIFIGVIIVALIREILISTLRHDALETQAFLAGTLLILGIVYFLVAKSQSPNAH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA