Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

Click here to switch to the map view.

The map label for this gene is 197120097

Identifier: 197120097

GI number: 197120097

Start: 4262282

End: 4263367

Strand: Direct

Name: 197120097

Synonym: Gbem_3736

Alternate gene names: NA

Gene position: 4262282-4263367 (Clockwise)

Preceding gene: 197120096

Following gene: 197120098

Centisome position: 92.35

GC content: 62.98

Gene sequence:

>1086_bases
GTGCCCCGGAAGAGCATCCTTCTCTTCAGTTGCGAGCCCGGGGGCGCCGAGATACTGATCCCGGTGATCCGGCTCCTGCA
CGCCGAGCCTGCCTACCGGGTGGTGGTCCTGAGCTACGGGCTGGGCGCGCAGCGCTTCGCCGCCCGCGGCGTCGATTTCA
TTGAGATCCCCCCGGTGCAAAAGAACGACAACGCCGTGCTGGACTCCCACCGCCCAGACTTCCTCATCACCTCGGCAACG
AGCCTCCCCGAGCGGGACATGTCGGAAAAAAACCTCTGGCGCAACGCCCGCGCCCGGGGAGTCCCGAGCCTGGCGCTGGT
CGACCAGTGGCAAAACTACGCTGTGCGCTTCAGCGGCCCCGGAGAGGGTGAGAGGCTCGCCTACCTGCCTGATTTCATTA
ACTGTATCGACGAAGTGGGCGCCGTCGAGATGATCCGGGAGGGGTTCCAGCCGGGGATGCTGGTCCGCTTCGGGCACCCC
TCGCTTTCCCAGCTGCGGCGGCAGGCCCGCAACTTGCAGAGAGAGGAGATCAGGCGACGGCTTGGGATACCGGCGACGCA
GCAGGTAGCACTCTTCGTTTCCGAGGCGATCCGTGAGCACTACGGACGCAGCCGAGGGTACGACCAGTACGATTCACTCG
GGCTCTTTCTCGACCTAGTCGCCGACTCCGGCACCGGGATTAAGCCGGTGATCAAACTGCACCCCAAGGATGAAGCGTCC
CTGTTCGATCCGATGCTGCGCAGCAGGAACCTGCAGCCTCTCATGATCGCCAACGAGCTCAGCTCCCTGGAATGCATCGC
GCTTGCCGACCGGGTCTACGGCATGACCTCCATCATGCTCATCGAGGCGTACCTGCTCGGCAAGCCGGTACTTTCACTGC
AACCAGGCCTCGCGGTCGAGGACCCGCTGGTCCTTTCCCGGCACGGCATGGTCCCCCGGCTGGGCACTCCGGAGCAGGCG
ATGACGGCAGCGACCGAAACACCCCCTTTGCTGTCTTTAAAAGTCGAGTTCGAGATCGACCGTTTTTTGCAATTCATCCG
AGACGTCGTTACAAACGCAAAGGGAAAGAGCCACTATGCAGCTTGA

Upstream 100 bases:

>100_bases
GGCTGCAGCAGTCGCTCTACCCGGACCTCGGACGACGCGGCAACTACCTCGTCGCCGTACTGGGCAAGGCGGACGGCGTG
CCCGGCGCGGAGCGACGATA

Downstream 100 bases:

>100_bases
TGACATCCTCCTGAAGAACGCGCCCCTGAAAAACCTGCACGCCGGCAAAAGGTGCTTCATCGTTGGGAACGGGCCTTCTA
TTAAATCCCAGGACCTCACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 361; Mature: 360

Protein sequence:

>361_residues
MPRKSILLFSCEPGGAEILIPVIRLLHAEPAYRVVVLSYGLGAQRFAARGVDFIEIPPVQKNDNAVLDSHRPDFLITSAT
SLPERDMSEKNLWRNARARGVPSLALVDQWQNYAVRFSGPGEGERLAYLPDFINCIDEVGAVEMIREGFQPGMLVRFGHP
SLSQLRRQARNLQREEIRRRLGIPATQQVALFVSEAIREHYGRSRGYDQYDSLGLFLDLVADSGTGIKPVIKLHPKDEAS
LFDPMLRSRNLQPLMIANELSSLECIALADRVYGMTSIMLIEAYLLGKPVLSLQPGLAVEDPLVLSRHGMVPRLGTPEQA
MTAATETPPLLSLKVEFEIDRFLQFIRDVVTNAKGKSHYAA

Sequences:

>Translated_361_residues
MPRKSILLFSCEPGGAEILIPVIRLLHAEPAYRVVVLSYGLGAQRFAARGVDFIEIPPVQKNDNAVLDSHRPDFLITSAT
SLPERDMSEKNLWRNARARGVPSLALVDQWQNYAVRFSGPGEGERLAYLPDFINCIDEVGAVEMIREGFQPGMLVRFGHP
SLSQLRRQARNLQREEIRRRLGIPATQQVALFVSEAIREHYGRSRGYDQYDSLGLFLDLVADSGTGIKPVIKLHPKDEAS
LFDPMLRSRNLQPLMIANELSSLECIALADRVYGMTSIMLIEAYLLGKPVLSLQPGLAVEDPLVLSRHGMVPRLGTPEQA
MTAATETPPLLSLKVEFEIDRFLQFIRDVVTNAKGKSHYAA
>Mature_360_residues
PRKSILLFSCEPGGAEILIPVIRLLHAEPAYRVVVLSYGLGAQRFAARGVDFIEIPPVQKNDNAVLDSHRPDFLITSATS
LPERDMSEKNLWRNARARGVPSLALVDQWQNYAVRFSGPGEGERLAYLPDFINCIDEVGAVEMIREGFQPGMLVRFGHPS
LSQLRRQARNLQREEIRRRLGIPATQQVALFVSEAIREHYGRSRGYDQYDSLGLFLDLVADSGTGIKPVIKLHPKDEASL
FDPMLRSRNLQPLMIANELSSLECIALADRVYGMTSIMLIEAYLLGKPVLSLQPGLAVEDPLVLSRHGMVPRLGTPEQAM
TAATETPPLLSLKVEFEIDRFLQFIRDVVTNAKGKSHYAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40240; Mature: 40109

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRKSILLFSCEPGGAEILIPVIRLLHAEPAYRVVVLSYGLGAQRFAARGVDFIEIPPVQ
CCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHCCCCEEECCCCC
KNDNAVLDSHRPDFLITSATSLPERDMSEKNLWRNARARGVPSLALVDQWQNYAVRFSGP
CCCCCEECCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHCCCCEEEECCC
GEGERLAYLPDFINCIDEVGAVEMIREGFQPGMLVRFGHPSLSQLRRQARNLQREEIRRR
CCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCHHHHHHHH
LGIPATQQVALFVSEAIREHYGRSRGYDQYDSLGLFLDLVADSGTGIKPVIKLHPKDEAS
HCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHEEEEEECCCCCCCCEEEECCCCCHH
LFDPMLRSRNLQPLMIANELSSLECIALADRVYGMTSIMLIEAYLLGKPVLSLQPGLAVE
HHHHHHHHCCCCEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCC
DPLVLSRHGMVPRLGTPEQAMTAATETPPLLSLKVEFEIDRFLQFIRDVVTNAKGKSHYA
CCEEECCCCCCCCCCCCHHHHHHCCCCCCEEEEEEEECHHHHHHHHHHHHHCCCCCCCCC
A
C
>Mature Secondary Structure 
PRKSILLFSCEPGGAEILIPVIRLLHAEPAYRVVVLSYGLGAQRFAARGVDFIEIPPVQ
CCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHCCCCEEECCCCC
KNDNAVLDSHRPDFLITSATSLPERDMSEKNLWRNARARGVPSLALVDQWQNYAVRFSGP
CCCCCEECCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHCCCCEEEECCC
GEGERLAYLPDFINCIDEVGAVEMIREGFQPGMLVRFGHPSLSQLRRQARNLQREEIRRR
CCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCHHHHHHHH
LGIPATQQVALFVSEAIREHYGRSRGYDQYDSLGLFLDLVADSGTGIKPVIKLHPKDEAS
HCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHEEEEEECCCCCCCCEEEECCCCCHH
LFDPMLRSRNLQPLMIANELSSLECIALADRVYGMTSIMLIEAYLLGKPVLSLQPGLAVE
HHHHHHHHCCCCEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCC
DPLVLSRHGMVPRLGTPEQAMTAATETPPLLSLKVEFEIDRFLQFIRDVVTNAKGKSHYA
CCEEECCCCCCCCCCCCHHHHHHCCCCCCEEEEEEEECHHHHHHHHHHHHHCCCCCCCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA