Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197119389

Identifier: 197119389

GI number: 197119389

Start: 3486411

End: 3486962

Strand: Direct

Name: 197119389

Synonym: Gbem_3018

Alternate gene names: NA

Gene position: 3486411-3486962 (Clockwise)

Preceding gene: 197119388

Following gene: 197119398

Centisome position: 75.54

GC content: 57.97

Gene sequence:

>552_bases
ATGAAACGGGACATCACCCAGAGGCTCAAGGACGAACACCAGCTGATCCTGCGCATGCTCGCCCTTTTGGAGCAGAACGC
GAAACGCACTGAAGAGGGCACCTTCAAGAATTACCAGTTCTACCTGGACGGGGTCGACTTCATCAGGAATTACGCCGACC
GTTTCCACCATGCCAAGGAGGAGGATGTCCTGTTCGAAGCCCTGGTGACAAACGGCATGCCCAGGGCCAACAGCCCGGTA
GCGGCGATGCTGATGGAGCATGACCTGGGAAGGGCCTTCGTTAAAGGGATGGAGGAGGCCGCCACCCGCGCTATCAATGG
CGAGGCGGAACAGGAAGAAGCCATAGTCGCCAACGCGAGGGGTTACCTGGAGCTTTTGCGCGATCATATCGCCAAGGAGG
ATGACATCCTCTACCCCCTGGCGGAGCGGGTGCTACCGGAGGAGATGCGCGAGAATATCGTGGCTGGTTACCGCACGGCC
GAGGAGAAGTCGGAAGCAGGTTTCGAGGCGCATTACAAAAGCGTAGTGGAAAAGTACGAGGCGGAAGGATAA

Upstream 100 bases:

>100_bases
GGCCTGGACATGATGGTGAGGCAGGCTCTCACCCAGTCCGGGAAAGAGATACCGCTGGAGACCGCAGTGATCGGCATCAA
CGGGGAGAGGAGGAACTAGG

Downstream 100 bases:

>100_bases
AAGCTTAAAGCCAAAAGGCGGAACACAGAGGTCACGGAGGTTCGAGGAGGTCACAGAGGTGCTTTTCCGGTAAGGCGAAA
GGCACTCACCACAGAGGTAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MKRDITQRLKDEHQLILRMLALLEQNAKRTEEGTFKNYQFYLDGVDFIRNYADRFHHAKEEDVLFEALVTNGMPRANSPV
AAMLMEHDLGRAFVKGMEEAATRAINGEAEQEEAIVANARGYLELLRDHIAKEDDILYPLAERVLPEEMRENIVAGYRTA
EEKSEAGFEAHYKSVVEKYEAEG

Sequences:

>Translated_183_residues
MKRDITQRLKDEHQLILRMLALLEQNAKRTEEGTFKNYQFYLDGVDFIRNYADRFHHAKEEDVLFEALVTNGMPRANSPV
AAMLMEHDLGRAFVKGMEEAATRAINGEAEQEEAIVANARGYLELLRDHIAKEDDILYPLAERVLPEEMRENIVAGYRTA
EEKSEAGFEAHYKSVVEKYEAEG
>Mature_183_residues
MKRDITQRLKDEHQLILRMLALLEQNAKRTEEGTFKNYQFYLDGVDFIRNYADRFHHAKEEDVLFEALVTNGMPRANSPV
AAMLMEHDLGRAFVKGMEEAATRAINGEAEQEEAIVANARGYLELLRDHIAKEDDILYPLAERVLPEEMRENIVAGYRTA
EEKSEAGFEAHYKSVVEKYEAEG

Specific function: Unknown

COG id: COG3945

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21036; Mature: 21036

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRDITQRLKDEHQLILRMLALLEQNAKRTEEGTFKNYQFYLDGVDFIRNYADRFHHAKE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHCCCH
EDVLFEALVTNGMPRANSPVAAMLMEHDLGRAFVKGMEEAATRAINGEAEQEEAIVANAR
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
GYLELLRDHIAKEDDILYPLAERVLPEEMRENIVAGYRTAEEKSEAGFEAHYKSVVEKYE
HHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
AEG
CCC
>Mature Secondary Structure
MKRDITQRLKDEHQLILRMLALLEQNAKRTEEGTFKNYQFYLDGVDFIRNYADRFHHAKE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHCCCH
EDVLFEALVTNGMPRANSPVAAMLMEHDLGRAFVKGMEEAATRAINGEAEQEEAIVANAR
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
GYLELLRDHIAKEDDILYPLAERVLPEEMRENIVAGYRTAEEKSEAGFEAHYKSVVEKYE
HHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
AEG
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA