| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197119389
Identifier: 197119389
GI number: 197119389
Start: 3486411
End: 3486962
Strand: Direct
Name: 197119389
Synonym: Gbem_3018
Alternate gene names: NA
Gene position: 3486411-3486962 (Clockwise)
Preceding gene: 197119388
Following gene: 197119398
Centisome position: 75.54
GC content: 57.97
Gene sequence:
>552_bases ATGAAACGGGACATCACCCAGAGGCTCAAGGACGAACACCAGCTGATCCTGCGCATGCTCGCCCTTTTGGAGCAGAACGC GAAACGCACTGAAGAGGGCACCTTCAAGAATTACCAGTTCTACCTGGACGGGGTCGACTTCATCAGGAATTACGCCGACC GTTTCCACCATGCCAAGGAGGAGGATGTCCTGTTCGAAGCCCTGGTGACAAACGGCATGCCCAGGGCCAACAGCCCGGTA GCGGCGATGCTGATGGAGCATGACCTGGGAAGGGCCTTCGTTAAAGGGATGGAGGAGGCCGCCACCCGCGCTATCAATGG CGAGGCGGAACAGGAAGAAGCCATAGTCGCCAACGCGAGGGGTTACCTGGAGCTTTTGCGCGATCATATCGCCAAGGAGG ATGACATCCTCTACCCCCTGGCGGAGCGGGTGCTACCGGAGGAGATGCGCGAGAATATCGTGGCTGGTTACCGCACGGCC GAGGAGAAGTCGGAAGCAGGTTTCGAGGCGCATTACAAAAGCGTAGTGGAAAAGTACGAGGCGGAAGGATAA
Upstream 100 bases:
>100_bases GGCCTGGACATGATGGTGAGGCAGGCTCTCACCCAGTCCGGGAAAGAGATACCGCTGGAGACCGCAGTGATCGGCATCAA CGGGGAGAGGAGGAACTAGG
Downstream 100 bases:
>100_bases AAGCTTAAAGCCAAAAGGCGGAACACAGAGGTCACGGAGGTTCGAGGAGGTCACAGAGGTGCTTTTCCGGTAAGGCGAAA GGCACTCACCACAGAGGTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MKRDITQRLKDEHQLILRMLALLEQNAKRTEEGTFKNYQFYLDGVDFIRNYADRFHHAKEEDVLFEALVTNGMPRANSPV AAMLMEHDLGRAFVKGMEEAATRAINGEAEQEEAIVANARGYLELLRDHIAKEDDILYPLAERVLPEEMRENIVAGYRTA EEKSEAGFEAHYKSVVEKYEAEG
Sequences:
>Translated_183_residues MKRDITQRLKDEHQLILRMLALLEQNAKRTEEGTFKNYQFYLDGVDFIRNYADRFHHAKEEDVLFEALVTNGMPRANSPV AAMLMEHDLGRAFVKGMEEAATRAINGEAEQEEAIVANARGYLELLRDHIAKEDDILYPLAERVLPEEMRENIVAGYRTA EEKSEAGFEAHYKSVVEKYEAEG >Mature_183_residues MKRDITQRLKDEHQLILRMLALLEQNAKRTEEGTFKNYQFYLDGVDFIRNYADRFHHAKEEDVLFEALVTNGMPRANSPV AAMLMEHDLGRAFVKGMEEAATRAINGEAEQEEAIVANARGYLELLRDHIAKEDDILYPLAERVLPEEMRENIVAGYRTA EEKSEAGFEAHYKSVVEKYEAEG
Specific function: Unknown
COG id: COG3945
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21036; Mature: 21036
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRDITQRLKDEHQLILRMLALLEQNAKRTEEGTFKNYQFYLDGVDFIRNYADRFHHAKE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHCCCH EDVLFEALVTNGMPRANSPVAAMLMEHDLGRAFVKGMEEAATRAINGEAEQEEAIVANAR HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH GYLELLRDHIAKEDDILYPLAERVLPEEMRENIVAGYRTAEEKSEAGFEAHYKSVVEKYE HHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH AEG CCC >Mature Secondary Structure MKRDITQRLKDEHQLILRMLALLEQNAKRTEEGTFKNYQFYLDGVDFIRNYADRFHHAKE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHCCCH EDVLFEALVTNGMPRANSPVAAMLMEHDLGRAFVKGMEEAATRAINGEAEQEEAIVANAR HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH GYLELLRDHIAKEDDILYPLAERVLPEEMRENIVAGYRTAEEKSEAGFEAHYKSVVEKYE HHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH AEG CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA