Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197119370

Identifier: 197119370

GI number: 197119370

Start: 3467287

End: 3467736

Strand: Direct

Name: 197119370

Synonym: Gbem_2998

Alternate gene names: NA

Gene position: 3467287-3467736 (Clockwise)

Preceding gene: 197119369

Following gene: 197119371

Centisome position: 75.13

GC content: 54.89

Gene sequence:

>450_bases
ATGTCACGAAGAAGACTCTACACACCCATCACCAGATCCGGCTCCTCCATCCTTGCCAGCATCACGACCCAACTCTGGCA
GCAGAGCGCACGCACCCACCAGAAAAAGACGTACTACGACGACTGTCCAGAGCACCTCGGGATCTACTTTTTCATCTGGT
TCATTTTCATGTTCGTCTTCTCTAACATTGCAGCCTTCCTGGGCCAGCACCTCGCGTGGTGGAGAACCGAGCCAGCGGGA
TGGCTCACGTACGGCTCATGCACCGTCACCTACCTGAGCCTCATGGCTTACCTGAACCATCGAGACCGGGCCAAGCTGAA
GCAGATCCGCGATAAGGCAGAGGATCAGAGGAGGGCCGAGGCGAGGAGGATCATAGCAATGTCGTATGGGAACGAAAGAC
CTCCCGAAGGGGAAGTAAGAGAGGAATGGGAAAAATGGCATCAACAATGA

Upstream 100 bases:

>100_bases
GTAGCAGTAGCAGTAGCAGTAGCAGTAGCAGTAGCAGTAGCAGCAGCAAAACTGAATTGTTATCCACACAGGGGGGCACC
AACCTAACAGGAGGTGCACC

Downstream 100 bases:

>100_bases
GGGAGCGCGTGAACGATAGCAGCGTATGGCACCAAAGTGCCGCCGTGGTTAAGGAGGAAGGAAAATGACACCCAGAAGAA
GACTCTACATACCCATCACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MSRRRLYTPITRSGSSILASITTQLWQQSARTHQKKTYYDDCPEHLGIYFFIWFIFMFVFSNIAAFLGQHLAWWRTEPAG
WLTYGSCTVTYLSLMAYLNHRDRAKLKQIRDKAEDQRRAEARRIIAMSYGNERPPEGEVREEWEKWHQQ

Sequences:

>Translated_149_residues
MSRRRLYTPITRSGSSILASITTQLWQQSARTHQKKTYYDDCPEHLGIYFFIWFIFMFVFSNIAAFLGQHLAWWRTEPAG
WLTYGSCTVTYLSLMAYLNHRDRAKLKQIRDKAEDQRRAEARRIIAMSYGNERPPEGEVREEWEKWHQQ
>Mature_148_residues
SRRRLYTPITRSGSSILASITTQLWQQSARTHQKKTYYDDCPEHLGIYFFIWFIFMFVFSNIAAFLGQHLAWWRTEPAGW
LTYGSCTVTYLSLMAYLNHRDRAKLKQIRDKAEDQRRAEARRIIAMSYGNERPPEGEVREEWEKWHQQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17841; Mature: 17710

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRRRLYTPITRSGSSILASITTQLWQQSARTHQKKTYYDDCPEHLGIYFFIWFIFMFVF
CCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHH
SNIAAFLGQHLAWWRTEPAGWLTYGSCTVTYLSLMAYLNHRDRAKLKQIRDKAEDQRRAE
HHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
ARRIIAMSYGNERPPEGEVREEWEKWHQQ
HHHHHHHHCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
SRRRLYTPITRSGSSILASITTQLWQQSARTHQKKTYYDDCPEHLGIYFFIWFIFMFVF
CCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHH
SNIAAFLGQHLAWWRTEPAGWLTYGSCTVTYLSLMAYLNHRDRAKLKQIRDKAEDQRRAE
HHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
ARRIIAMSYGNERPPEGEVREEWEKWHQQ
HHHHHHHHCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA