| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197119370
Identifier: 197119370
GI number: 197119370
Start: 3467287
End: 3467736
Strand: Direct
Name: 197119370
Synonym: Gbem_2998
Alternate gene names: NA
Gene position: 3467287-3467736 (Clockwise)
Preceding gene: 197119369
Following gene: 197119371
Centisome position: 75.13
GC content: 54.89
Gene sequence:
>450_bases ATGTCACGAAGAAGACTCTACACACCCATCACCAGATCCGGCTCCTCCATCCTTGCCAGCATCACGACCCAACTCTGGCA GCAGAGCGCACGCACCCACCAGAAAAAGACGTACTACGACGACTGTCCAGAGCACCTCGGGATCTACTTTTTCATCTGGT TCATTTTCATGTTCGTCTTCTCTAACATTGCAGCCTTCCTGGGCCAGCACCTCGCGTGGTGGAGAACCGAGCCAGCGGGA TGGCTCACGTACGGCTCATGCACCGTCACCTACCTGAGCCTCATGGCTTACCTGAACCATCGAGACCGGGCCAAGCTGAA GCAGATCCGCGATAAGGCAGAGGATCAGAGGAGGGCCGAGGCGAGGAGGATCATAGCAATGTCGTATGGGAACGAAAGAC CTCCCGAAGGGGAAGTAAGAGAGGAATGGGAAAAATGGCATCAACAATGA
Upstream 100 bases:
>100_bases GTAGCAGTAGCAGTAGCAGTAGCAGTAGCAGTAGCAGTAGCAGCAGCAAAACTGAATTGTTATCCACACAGGGGGGCACC AACCTAACAGGAGGTGCACC
Downstream 100 bases:
>100_bases GGGAGCGCGTGAACGATAGCAGCGTATGGCACCAAAGTGCCGCCGTGGTTAAGGAGGAAGGAAAATGACACCCAGAAGAA GACTCTACATACCCATCACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MSRRRLYTPITRSGSSILASITTQLWQQSARTHQKKTYYDDCPEHLGIYFFIWFIFMFVFSNIAAFLGQHLAWWRTEPAG WLTYGSCTVTYLSLMAYLNHRDRAKLKQIRDKAEDQRRAEARRIIAMSYGNERPPEGEVREEWEKWHQQ
Sequences:
>Translated_149_residues MSRRRLYTPITRSGSSILASITTQLWQQSARTHQKKTYYDDCPEHLGIYFFIWFIFMFVFSNIAAFLGQHLAWWRTEPAG WLTYGSCTVTYLSLMAYLNHRDRAKLKQIRDKAEDQRRAEARRIIAMSYGNERPPEGEVREEWEKWHQQ >Mature_148_residues SRRRLYTPITRSGSSILASITTQLWQQSARTHQKKTYYDDCPEHLGIYFFIWFIFMFVFSNIAAFLGQHLAWWRTEPAGW LTYGSCTVTYLSLMAYLNHRDRAKLKQIRDKAEDQRRAEARRIIAMSYGNERPPEGEVREEWEKWHQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17841; Mature: 17710
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRRLYTPITRSGSSILASITTQLWQQSARTHQKKTYYDDCPEHLGIYFFIWFIFMFVF CCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHH SNIAAFLGQHLAWWRTEPAGWLTYGSCTVTYLSLMAYLNHRDRAKLKQIRDKAEDQRRAE HHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH ARRIIAMSYGNERPPEGEVREEWEKWHQQ HHHHHHHHCCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure SRRRLYTPITRSGSSILASITTQLWQQSARTHQKKTYYDDCPEHLGIYFFIWFIFMFVF CCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHH SNIAAFLGQHLAWWRTEPAGWLTYGSCTVTYLSLMAYLNHRDRAKLKQIRDKAEDQRRAE HHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH ARRIIAMSYGNERPPEGEVREEWEKWHQQ HHHHHHHHCCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA