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The map label for this gene is atoS [C]

Identifier: 197119334

GI number: 197119334

Start: 3428824

End: 3431433

Strand: Direct

Name: atoS [C]

Synonym: Gbem_2962

Alternate gene names: 197119334

Gene position: 3428824-3431433 (Clockwise)

Preceding gene: 197119333

Following gene: 197119336

Centisome position: 74.29

GC content: 57.74

Gene sequence:

>2610_bases
ATGCCGACCACCCCGCCACCAGTCGACAACCCACCCTCCACAAGCCTTTGGGCAAAAACCATACATGTTTTGCCATACCT
GGTCATGGCCCTTTCTTTTCTTTTGACTTTCTTCTTCTGGCGCCAGTACGACCACAGCCTGAACATCAGATCCCAGGAAG
TATTCAACGATCGCGTCGATGAGATAAAGAGTAAGTTCTTCACCAGAATGACGGATGACGAACAGATCCTGAGGGGGGCG
GCCGGACTTTTCAACGCCAGTGAGGATGTGACGCGCGACGAGTGGCGGCGCTATGCCCTGTCGCTGTCGCTTGATAAGCA
CTTTCCCGGTTTCCAGGGTTTGGGCTTCGCCGAGGTGGTCCGTCCCAAGGACTTGGAGCGCCATATCCAGCGGATAAGGC
GAGAAGGGTTCCCCGATTACAGATTATGGCCGGAGGGGGAGCGGCAGGAATATACCGCCATCATCTACTTGGAACCCTTC
GACTGGCGCAACCAGCGTGCCTTCGGCTACGACATGTTCTCCGCCCCCCACCGACGCGAGGCGATGTCGAAAGCCCGCGA
CCTGGGAGAAGCTGTGGTAACCGGTCCGGTGACACTGGTGCAGGAAACAAAGAGGGATAAGCAGACCGGAGTGTTGATGT
ACCTCCCCGTGTACAAGCGGGGTCTCCCCTTGGAAACCGTAGCGCAGCGGCGGATCGCGGTGCAGGGATATACATTTAGC
CCGATCAGGATCAAGAATTTCCTTTCGGCAACCTTCCCCAGAATGCCGGAAGACATAGGCTTCAGGATCTACACGGACAA
GGAGCCGAACCCCGCGGGGCTCCTCTACGACTCCGTCTCCGACTCCAACCTCAACCTTCCGGAAAACTACCGGGGCGAAC
TGCAGGCGACCCGGTCCTTTCAAGGGTTCGGCCGGAACTGGTTGTTGACCTTCGAGTCGCTGCCGCACACGGCCCAGGAG
CAGAGGAAAACCCAGTCCAGAAACTACCTGATCGTCGGCATTACCGTCAGCATCCTGCTGTCGGTCATCGCATTCATGCT
CCGTTCCGCACATGCCGGCGCCATCGCCGCAGCCCAGGCACTTAAGGAAAGCCAGGAGCGTTATCGCAAGATCTCGGAAG
ACAGTCCCGCCTATATTGCCACCTTCCTTCCCGATGGCACGCTCACATATGTAAACCCCGCCTTGGCCCACGACCTGGGA
AAGCGCCAGGAAGACCTTTTAGGAAAAAGCTTCTTCGAGTTTCTCCTGCCGGAGTACCGGGAGCCGGTCAGGCTGGGGTT
GCACGCCCTTTCGCCTCAAAACCCGACCCAAACACTGGAACAAGCCATGGTTGGTCCCAATGAAGCTGTAATCTGGCACG
AATGGACCAATCGGGCGGTGTTCGACGACCACGGAGGCATAACCGAGTTTCAGGGCGTGGGGCAGAACATTACTGAGAGG
AAGAAAGCAGCTGAAGAACGCTCCCGACTGGAACAGCAGATGCTGCACGCCCAGAAAATGGAAAGCCTGGGAGTGCTGGC
CGGCGGCGTGGCACATGACTTCAACAACATCCTGATGGCCATCATAGGGAACGTGGACTTGTCACTGATGAAGATCGAGG
AGGCCTCCCCCATCACCGCAAATCTGCGCAACATCGAGAAAGCTGCAATGAGGGCGGCCGATCTTGCCAAGCAGATGCTT
GCCTACTCCGGCAAAGGGAAATTCGTCATAGAAAAGCTGGACCTGAACCGGCTGATCGAAAAGCTGCACCCGATCCTGGA
ACCGTCGCTACCGACCAACGCCGTCCTGACACTGAAGCTGCACAAGCCGCTCCCGATGGTCGAAGGGGATGCCAACCAGA
TGCGGCAGATAGTGATGAACCTGTTTATGAACGCCGTAGAGGCGCTTGGCGAAAACGGCGGCGAGATAATCATCAGCACC
GATGACGGCGTACAGGACGGGGAGAGCCTGCAGAACGTGCTGCTGGGCGAAACCCTGGCCGAAGGAAGCTACGTGCTTTT
GGAGGTCACAGACACCGGCTGCGGCATGGAGAAGGAAGTGCTCGACAAAGTCTTCGATCCCTTCTTTACCACCAAGTTCA
CCGGCCGGGGGCTGGGTCTAGCCGCAGTGCACGGCATAGTAAGAGGTCACAAGGGCGGGATAAGGATATCCAGCGAGCCC
GGCATGGGAACCACTTTTCAAGTGCTGCTGCCGACCTCTGAGCCCACACCGGTGGAGGTCTCGGTCCCGGAGGAAATCGA
GAATGGCTGGAGCGGCGTGGGAAGGATTCTGCTCGTGGACGACGAGGAGGTAGTGAGAACCGTCGCGGCCGAGCTGCTGA
AAGAGCTGGGGTTCACGCCTGTTGTTGCCGGCAGTGGCGCCGAGGCCATAGAAACCTTCAAGAACAACCAGGACCTACAG
GCCGTCATCCTGGACCTGACCATGCCCGGAATGGATGGCGAAGAGTGCTTCCGCGCACTGCGGGGGATCGATCCGGAAGT
AAAAGTGATCATGTCCAGCGGGTTCAGCGAACAAGACGTAGTCCAGAAATTTCCCGGCAAAGAGCTGGCAGGATTCATCC
AGAAGCCGTACACCCTCAAAGCCCTCAAAGAAGTGATGCGGAAGGTGTAG

Upstream 100 bases:

>100_bases
GTCGGCAAGATAGCAGCGGCATCATTGAATTCCCCACCTGTTCAAGTAAACTTAGCGTCGAAAGAAGCTCCCCAAGCAAG
CCATAATGACAGGATAACGC

Downstream 100 bases:

>100_bases
ATTTACTTCGTATCGCTAAGCGTAAGCTGTTTGTAAGGCCAGCCTTGCATCCCGTCTTCCAGGATAAACAGGCGCTTTTC
GGCTACCCCTTTTCCCTTCA

Product: CHASE/PAS domain-containing sensor histidine kinase response regulator

Products: NA

Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]

Number of amino acids: Translated: 869; Mature: 868

Protein sequence:

>869_residues
MPTTPPPVDNPPSTSLWAKTIHVLPYLVMALSFLLTFFFWRQYDHSLNIRSQEVFNDRVDEIKSKFFTRMTDDEQILRGA
AGLFNASEDVTRDEWRRYALSLSLDKHFPGFQGLGFAEVVRPKDLERHIQRIRREGFPDYRLWPEGERQEYTAIIYLEPF
DWRNQRAFGYDMFSAPHRREAMSKARDLGEAVVTGPVTLVQETKRDKQTGVLMYLPVYKRGLPLETVAQRRIAVQGYTFS
PIRIKNFLSATFPRMPEDIGFRIYTDKEPNPAGLLYDSVSDSNLNLPENYRGELQATRSFQGFGRNWLLTFESLPHTAQE
QRKTQSRNYLIVGITVSILLSVIAFMLRSAHAGAIAAAQALKESQERYRKISEDSPAYIATFLPDGTLTYVNPALAHDLG
KRQEDLLGKSFFEFLLPEYREPVRLGLHALSPQNPTQTLEQAMVGPNEAVIWHEWTNRAVFDDHGGITEFQGVGQNITER
KKAAEERSRLEQQMLHAQKMESLGVLAGGVAHDFNNILMAIIGNVDLSLMKIEEASPITANLRNIEKAAMRAADLAKQML
AYSGKGKFVIEKLDLNRLIEKLHPILEPSLPTNAVLTLKLHKPLPMVEGDANQMRQIVMNLFMNAVEALGENGGEIIIST
DDGVQDGESLQNVLLGETLAEGSYVLLEVTDTGCGMEKEVLDKVFDPFFTTKFTGRGLGLAAVHGIVRGHKGGIRISSEP
GMGTTFQVLLPTSEPTPVEVSVPEEIENGWSGVGRILLVDDEEVVRTVAAELLKELGFTPVVAGSGAEAIETFKNNQDLQ
AVILDLTMPGMDGEECFRALRGIDPEVKVIMSSGFSEQDVVQKFPGKELAGFIQKPYTLKALKEVMRKV

Sequences:

>Translated_869_residues
MPTTPPPVDNPPSTSLWAKTIHVLPYLVMALSFLLTFFFWRQYDHSLNIRSQEVFNDRVDEIKSKFFTRMTDDEQILRGA
AGLFNASEDVTRDEWRRYALSLSLDKHFPGFQGLGFAEVVRPKDLERHIQRIRREGFPDYRLWPEGERQEYTAIIYLEPF
DWRNQRAFGYDMFSAPHRREAMSKARDLGEAVVTGPVTLVQETKRDKQTGVLMYLPVYKRGLPLETVAQRRIAVQGYTFS
PIRIKNFLSATFPRMPEDIGFRIYTDKEPNPAGLLYDSVSDSNLNLPENYRGELQATRSFQGFGRNWLLTFESLPHTAQE
QRKTQSRNYLIVGITVSILLSVIAFMLRSAHAGAIAAAQALKESQERYRKISEDSPAYIATFLPDGTLTYVNPALAHDLG
KRQEDLLGKSFFEFLLPEYREPVRLGLHALSPQNPTQTLEQAMVGPNEAVIWHEWTNRAVFDDHGGITEFQGVGQNITER
KKAAEERSRLEQQMLHAQKMESLGVLAGGVAHDFNNILMAIIGNVDLSLMKIEEASPITANLRNIEKAAMRAADLAKQML
AYSGKGKFVIEKLDLNRLIEKLHPILEPSLPTNAVLTLKLHKPLPMVEGDANQMRQIVMNLFMNAVEALGENGGEIIIST
DDGVQDGESLQNVLLGETLAEGSYVLLEVTDTGCGMEKEVLDKVFDPFFTTKFTGRGLGLAAVHGIVRGHKGGIRISSEP
GMGTTFQVLLPTSEPTPVEVSVPEEIENGWSGVGRILLVDDEEVVRTVAAELLKELGFTPVVAGSGAEAIETFKNNQDLQ
AVILDLTMPGMDGEECFRALRGIDPEVKVIMSSGFSEQDVVQKFPGKELAGFIQKPYTLKALKEVMRKV
>Mature_868_residues
PTTPPPVDNPPSTSLWAKTIHVLPYLVMALSFLLTFFFWRQYDHSLNIRSQEVFNDRVDEIKSKFFTRMTDDEQILRGAA
GLFNASEDVTRDEWRRYALSLSLDKHFPGFQGLGFAEVVRPKDLERHIQRIRREGFPDYRLWPEGERQEYTAIIYLEPFD
WRNQRAFGYDMFSAPHRREAMSKARDLGEAVVTGPVTLVQETKRDKQTGVLMYLPVYKRGLPLETVAQRRIAVQGYTFSP
IRIKNFLSATFPRMPEDIGFRIYTDKEPNPAGLLYDSVSDSNLNLPENYRGELQATRSFQGFGRNWLLTFESLPHTAQEQ
RKTQSRNYLIVGITVSILLSVIAFMLRSAHAGAIAAAQALKESQERYRKISEDSPAYIATFLPDGTLTYVNPALAHDLGK
RQEDLLGKSFFEFLLPEYREPVRLGLHALSPQNPTQTLEQAMVGPNEAVIWHEWTNRAVFDDHGGITEFQGVGQNITERK
KAAEERSRLEQQMLHAQKMESLGVLAGGVAHDFNNILMAIIGNVDLSLMKIEEASPITANLRNIEKAAMRAADLAKQMLA
YSGKGKFVIEKLDLNRLIEKLHPILEPSLPTNAVLTLKLHKPLPMVEGDANQMRQIVMNLFMNAVEALGENGGEIIISTD
DGVQDGESLQNVLLGETLAEGSYVLLEVTDTGCGMEKEVLDKVFDPFFTTKFTGRGLGLAAVHGIVRGHKGGIRISSEPG
MGTTFQVLLPTSEPTPVEVSVPEEIENGWSGVGRILLVDDEEVVRTVAAELLKELGFTPVVAGSGAEAIETFKNNQDLQA
VILDLTMPGMDGEECFRALRGIDPEVKVIMSSGFSEQDVVQKFPGKELAGFIQKPYTLKALKEVMRKV

Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=379, Percent_Identity=27.4406332453826, Blast_Score=125, Evalue=1e-29,
Organism=Escherichia coli, GI1790436, Length=253, Percent_Identity=32.0158102766798, Blast_Score=119, Evalue=7e-28,
Organism=Escherichia coli, GI87081816, Length=261, Percent_Identity=27.9693486590038, Blast_Score=97, Evalue=5e-21,
Organism=Escherichia coli, GI48994928, Length=540, Percent_Identity=24.6296296296296, Blast_Score=91, Evalue=3e-19,
Organism=Escherichia coli, GI1790300, Length=258, Percent_Identity=28.6821705426357, Blast_Score=89, Evalue=1e-18,
Organism=Escherichia coli, GI1788713, Length=271, Percent_Identity=24.7232472324723, Blast_Score=76, Evalue=8e-15,
Organism=Escherichia coli, GI145693157, Length=281, Percent_Identity=24.1992882562278, Blast_Score=71, Evalue=3e-13,
Organism=Escherichia coli, GI1786912, Length=250, Percent_Identity=27.6, Blast_Score=68, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR011006
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082
- InterPro:   IPR001789 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 97320; Mature: 97188

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: PS50839 CHASE ; PS50112 PAS ; PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN ; PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTTPPPVDNPPSTSLWAKTIHVLPYLVMALSFLLTFFFWRQYDHSLNIRSQEVFNDRVD
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
EIKSKFFTRMTDDEQILRGAAGLFNASEDVTRDEWRRYALSLSLDKHFPGFQGLGFAEVV
HHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHEEEHHCCCCCCCCCCHHHHC
RPKDLERHIQRIRREGFPDYRLWPEGERQEYTAIIYLEPFDWRNQRAFGYDMFSAPHRRE
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHCCCHHHH
AMSKARDLGEAVVTGPVTLVQETKRDKQTGVLMYLPVYKRGLPLETVAQRRIAVQGYTFS
HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEECHHHCCCCHHHHHHHHHEECCCCCC
PIRIKNFLSATFPRMPEDIGFRIYTDKEPNPAGLLYDSVSDSNLNLPENYRGELQATRSF
CHHHHHHHHHHCCCCCHHCCEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHH
QGFGRNWLLTFESLPHTAQEQRKTQSRNYLIVGITVSILLSVIAFMLRSAHAGAIAAAQA
HCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHH
LKESQERYRKISEDSPAYIATFLPDGTLTYVNPALAHDLGKRQEDLLGKSFFEFLLPEYR
HHHHHHHHHHCCCCCCCEEEEECCCCCEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHC
EPVRLGLHALSPQNPTQTLEQAMVGPNEAVIWHEWTNRAVFDDHGGITEFQGVGQNITER
CHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEECCCCCEEECCCCCCCHHHHCCCCHHHH
KKAAEERSRLEQQMLHAQKMESLGVLAGGVAHDFNNILMAIIGNVDLSLMKIEEASPITA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHH
NLRNIEKAAMRAADLAKQMLAYSGKGKFVIEKLDLNRLIEKLHPILEPSLPTNAVLTLKL
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCEEEEEEE
HKPLPMVEGDANQMRQIVMNLFMNAVEALGENGGEIIISTDDGVQDGESLQNVLLGETLA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHC
EGSYVLLEVTDTGCGMEKEVLDKVFDPFFTTKFTGRGLGLAAVHGIVRGHKGGIRISSEP
CCCEEEEEEECCCCCCCHHHHHHHHCHHHHCEECCCCCHHHHHHHHHHCCCCCEEECCCC
GMGTTFQVLLPTSEPTPVEVSVPEEIENGWSGVGRILLVDDEEVVRTVAAELLKELGFTP
CCCCEEEEEEECCCCCCEEEECCHHHHCCHHHCCEEEEECCHHHHHHHHHHHHHHCCCCE
VVAGSGAEAIETFKNNQDLQAVILDLTMPGMDGEECFRALRGIDPEVKVIMSSGFSEQDV
EEECCCHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHH
VQKFPGKELAGFIQKPYTLKALKEVMRKV
HHHCCCHHHHHHHCCCHHHHHHHHHHHHC
>Mature Secondary Structure 
PTTPPPVDNPPSTSLWAKTIHVLPYLVMALSFLLTFFFWRQYDHSLNIRSQEVFNDRVD
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
EIKSKFFTRMTDDEQILRGAAGLFNASEDVTRDEWRRYALSLSLDKHFPGFQGLGFAEVV
HHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHEEEHHCCCCCCCCCCHHHHC
RPKDLERHIQRIRREGFPDYRLWPEGERQEYTAIIYLEPFDWRNQRAFGYDMFSAPHRRE
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHCCCHHHH
AMSKARDLGEAVVTGPVTLVQETKRDKQTGVLMYLPVYKRGLPLETVAQRRIAVQGYTFS
HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEECHHHCCCCHHHHHHHHHEECCCCCC
PIRIKNFLSATFPRMPEDIGFRIYTDKEPNPAGLLYDSVSDSNLNLPENYRGELQATRSF
CHHHHHHHHHHCCCCCHHCCEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHH
QGFGRNWLLTFESLPHTAQEQRKTQSRNYLIVGITVSILLSVIAFMLRSAHAGAIAAAQA
HCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHH
LKESQERYRKISEDSPAYIATFLPDGTLTYVNPALAHDLGKRQEDLLGKSFFEFLLPEYR
HHHHHHHHHHCCCCCCCEEEEECCCCCEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHC
EPVRLGLHALSPQNPTQTLEQAMVGPNEAVIWHEWTNRAVFDDHGGITEFQGVGQNITER
CHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEECCCCCEEECCCCCCCHHHHCCCCHHHH
KKAAEERSRLEQQMLHAQKMESLGVLAGGVAHDFNNILMAIIGNVDLSLMKIEEASPITA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHH
NLRNIEKAAMRAADLAKQMLAYSGKGKFVIEKLDLNRLIEKLHPILEPSLPTNAVLTLKL
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCEEEEEEE
HKPLPMVEGDANQMRQIVMNLFMNAVEALGENGGEIIISTDDGVQDGESLQNVLLGETLA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHC
EGSYVLLEVTDTGCGMEKEVLDKVFDPFFTTKFTGRGLGLAAVHGIVRGHKGGIRISSEP
CCCEEEEEEECCCCCCCHHHHHHHHCHHHHCEECCCCCHHHHHHHHHHCCCCCEEECCCC
GMGTTFQVLLPTSEPTPVEVSVPEEIENGWSGVGRILLVDDEEVVRTVAAELLKELGFTP
CCCCEEEEEEECCCCCCEEEECCHHHHCCHHHCCEEEEECCHHHHHHHHHHHHHHCCCCE
VVAGSGAEAIETFKNNQDLQAVILDLTMPGMDGEECFRALRGIDPEVKVIMSSGFSEQDV
EEECCCHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHH
VQKFPGKELAGFIQKPYTLKALKEVMRKV
HHHCCCHHHHHHHCCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA