| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
Click here to switch to the map view.
The map label for this gene is ykgG [C]
Identifier: 197119282
GI number: 197119282
Start: 3357862
End: 3358413
Strand: Direct
Name: ykgG [C]
Synonym: Gbem_2910
Alternate gene names: 197119282
Gene position: 3357862-3358413 (Clockwise)
Preceding gene: 197119266
Following gene: 197119283
Centisome position: 72.76
GC content: 63.77
Gene sequence:
>552_bases ATGTACGAGCTATTCAAGACCAAGGCGTCCGCCGTCGGGGCGGAGGTGCATCGGGTCGGCGGCAAGATAGAGGCGGTTGA GCTGATCGTCTCCTTGCTGAAGGATGAAAACGTCGTCGATCTTCCCGGCTGCCGAGCGGTATGGGCGGAAGGGACCTTCC TGAATGGGATTGACCGGGGGGCACTAAAGGAGCTGCCGGGGCTTTCGTTCGAGGTGACCCGGGAGCGTGCGGCCCAGGCA AAGGTGGGGATCAGCGAAATGAGCTTCGCCGTCGCCGACACCGGTTCGCTGGTGCAGGATCAAAGCGCCGCCGCCGACCG GCTCGCCTCCTCGCTCACCGACATCCACATAGCCCTCGTCCCGAGCGCCAACATCGTCCCGGACAAGGTCTCCCTTTTCA GCAGGATCTCCCCCAGGACCAGCCGCTACATAGCATTCATCACCGGTCCCAGCCGCACCGCCGACATCGAGCGGGTGCTC ACCATCGGGGTGCACGGCCCCCAACGTCTGGTCATCATCTTCGTGGACGGGCTTGAGGGGGTTAGCCGATGA
Upstream 100 bases:
>100_bases CCGGAACGTCACCGTTTAAAACAGCTTTCCTGCAGCTTCGGCGGGACCGATCCTGCAGGCGGTGAAACCGGCGCGAGAGC CGGATGGAGGGAACCAGAGC
Downstream 100 bases:
>100_bases AAAAAGAGTTCAAGGCATCGATCAACCGGGCCCTCAACGACGCCAACCTGACTGGCGCGCTGGGGAAGTTTTCTGAAGCC TACAAGGTGAACCGCGCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MYELFKTKASAVGAEVHRVGGKIEAVELIVSLLKDENVVDLPGCRAVWAEGTFLNGIDRGALKELPGLSFEVTRERAAQA KVGISEMSFAVADTGSLVQDQSAAADRLASSLTDIHIALVPSANIVPDKVSLFSRISPRTSRYIAFITGPSRTADIERVL TIGVHGPQRLVIIFVDGLEGVSR
Sequences:
>Translated_183_residues MYELFKTKASAVGAEVHRVGGKIEAVELIVSLLKDENVVDLPGCRAVWAEGTFLNGIDRGALKELPGLSFEVTRERAAQA KVGISEMSFAVADTGSLVQDQSAAADRLASSLTDIHIALVPSANIVPDKVSLFSRISPRTSRYIAFITGPSRTADIERVL TIGVHGPQRLVIIFVDGLEGVSR >Mature_183_residues MYELFKTKASAVGAEVHRVGGKIEAVELIVSLLKDENVVDLPGCRAVWAEGTFLNGIDRGALKELPGLSFEVTRERAAQA KVGISEMSFAVADTGSLVQDQSAAADRLASSLTDIHIALVPSANIVPDKVSLFSRISPRTSRYIAFITGPSRTADIERVL TIGVHGPQRLVIIFVDGLEGVSR
Specific function: Unknown
COG id: COG1556
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19572; Mature: 19572
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYELFKTKASAVGAEVHRVGGKIEAVELIVSLLKDENVVDLPGCRAVWAEGTFLNGIDRG CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEECCCCCEEECCCCEECCCCCH ALKELPGLSFEVTRERAAQAKVGISEMSFAVADTGSLVQDQSAAADRLASSLTDIHIALV HHHHCCCCCEEHHHHHHHHHHCCHHHHEEEEECCCCHHHHHHHHHHHHHHHHHEEEEEEE PSANIVPDKVSLFSRISPRTSRYIAFITGPSRTADIERVLTIGVHGPQRLVIIFVDGLEG CCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCEEEEEEEECCCC VSR CCC >Mature Secondary Structure MYELFKTKASAVGAEVHRVGGKIEAVELIVSLLKDENVVDLPGCRAVWAEGTFLNGIDRG CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEECCCCCEEECCCCEECCCCCH ALKELPGLSFEVTRERAAQAKVGISEMSFAVADTGSLVQDQSAAADRLASSLTDIHIALV HHHHCCCCCEEHHHHHHHHHHCCHHHHEEEEECCCCHHHHHHHHHHHHHHHHHEEEEEEE PSANIVPDKVSLFSRISPRTSRYIAFITGPSRTADIERVLTIGVHGPQRLVIIFVDGLEG CCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCEEEEEEEECCCC VSR CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA