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The map label for this gene is mcp050 [C]

Identifier: 197119227

GI number: 197119227

Start: 3284932

End: 3286506

Strand: Direct

Name: mcp050 [C]

Synonym: Gbem_2854

Alternate gene names: 197119227

Gene position: 3284932-3286506 (Clockwise)

Preceding gene: 197119226

Following gene: 197119228

Centisome position: 71.18

GC content: 59.43

Gene sequence:

>1575_bases
ATGGAAACTATCTGGCACTACTATCTCTGTCTCACCATCAAGACCAGGTTGATGATTTTATGCCTGTGCTACAGCTTGTG
CATCGTCGCTGCAACAGTTGCAGGTTCACTCGACTCACAGATCTGGCAGTGGGGACTGACGATTTTGTTCATCGCCATGG
GCGCGCTATTCGGCGGCATCAACATCTGGGGCATCACCAGTGCGATCGCGCGGACCATCAACAACCTGGAGACGCTGGCA
CAGGGGAACCTCAGCCAGGAGATCGTAATCAAGCGCACCAACGAGATCAGCAAACTCCTCCACGCCATGCGCAAGATGGT
CGGCAACCAGACCGAGGTGCTGCGCAACATCCACGGCGCCAGCCTGCAGATGGAACAGTCTTCCTTTCAGATTTCCGAGA
TCTCCAACGAGATAGCCGATAGCACCAAGGCACAGCAAGCGCAGGTGCTGCAGGTTTCCGAAGCAACCGGCGAGGTGCTC
ACGATTTCTTCATCGGTGCGCGAACTCTCCGATATGATGCTGAACGAATCCCTGGTGACCGAAAAGGAGGCCGAACAAGG
CCTTGACGCCACCAACCAGAACATCGACCAGATGCGTTTAACGGTCACCGAGGTAAACCGCGCAGCGGAAGAGACTTCGG
GGTTGAACCAGGTGGCGGAGGAGATCCACAAGATCATCGCCAGCATCACGGACATAGCGGACCAGACCAACCTTTTGGCG
CTCAATGCCGCCATCGAGGCCGCAAGGGCAGGAGAACAGGGTCGCGGCTTTGCCGTAGTGGCCGACGAGGTCCGCAATCT
CGCCACACGTACCTCGAGGGAGACCCAAGAGATCACCAGGATCATCTCGTCCCTGGCGGAACAGGTAACCGCTACCATGG
GGACCATGGAACGGATCGTCGAACGCGTCAACGGCGGCGAGCAAAAGACCCTGCAGACGGCCCAGATAATACAGAGCATG
GCCTCCTCCGTCCGCGAGACCTCCGCGGCCAGCCGGCGCATCTCCGATGCGAGCAAATCGCAGATGGAGCGGCTCACGCA
GTTGCAGCAAAGCCAGGAATCGCTCTTCCACACCATAAAGGACAACGGGGCCAAGATCGGGGTCACCGCCACCATCAGCG
GGGACCTCAACGCCGTCACCAAGCAGTTCAACCGCCTGCTGGACAACTTCACCTTCAGTACCGAAACCGAAATCGAGCGT
TCCGCGCGCGAGCAGCGGCAGTACCCGCGCGCGAACAACGGGCTTCTGGCCGTGATGCGCGAGGCAGGCTCGCAGCAGGA
GATCCAGGGAATTACCAGCGATTTCAGCATGACCGGGCTCCAGCTGCGCATCGCCGCGCAGGCCGGCCTCAAAGAGGGGC
AACTCGTCGAGGTGGAACTGATGACTCCCGGCACTTCCCTGGACGAATTCGAGCAACAGGAGCCGCTCAAGATCGCTGCG
CGGGTGGTGTGGCTCCGTACCAACCATGAGGGTGCCGCCTGCGGCCTTGAATTCAACCCCCTGGTCCCGGCACAACAGCA
GCGCCTGGAAGCCTGCTTCCGGCATTTCAAGAAGAACTCCCGCTTCAAAAGCTAG

Upstream 100 bases:

>100_bases
ATGCGTTATGCCTTCCCTTTTGAAAAGTACGCGGCGGGCTTCTTTCTTGTGTAATGCGCAAAGACGCGCGACGATCAAAA
CAGAAAGGAGTTCCCGCTGC

Downstream 100 bases:

>100_bases
CGAGGCGGAAGCGCCGCCGGCGCTGCAGCGATCTCGGACAGAAAGGCACTTGGAATTCCAGGTGCCTTTTCGCGTGATGC
CCTGGCAAAGATTGCGGGAT

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 524; Mature: 524

Protein sequence:

>524_residues
METIWHYYLCLTIKTRLMILCLCYSLCIVAATVAGSLDSQIWQWGLTILFIAMGALFGGINIWGITSAIARTINNLETLA
QGNLSQEIVIKRTNEISKLLHAMRKMVGNQTEVLRNIHGASLQMEQSSFQISEISNEIADSTKAQQAQVLQVSEATGEVL
TISSSVRELSDMMLNESLVTEKEAEQGLDATNQNIDQMRLTVTEVNRAAEETSGLNQVAEEIHKIIASITDIADQTNLLA
LNAAIEAARAGEQGRGFAVVADEVRNLATRTSRETQEITRIISSLAEQVTATMGTMERIVERVNGGEQKTLQTAQIIQSM
ASSVRETSAASRRISDASKSQMERLTQLQQSQESLFHTIKDNGAKIGVTATISGDLNAVTKQFNRLLDNFTFSTETEIER
SAREQRQYPRANNGLLAVMREAGSQQEIQGITSDFSMTGLQLRIAAQAGLKEGQLVEVELMTPGTSLDEFEQQEPLKIAA
RVVWLRTNHEGAACGLEFNPLVPAQQQRLEACFRHFKKNSRFKS

Sequences:

>Translated_524_residues
METIWHYYLCLTIKTRLMILCLCYSLCIVAATVAGSLDSQIWQWGLTILFIAMGALFGGINIWGITSAIARTINNLETLA
QGNLSQEIVIKRTNEISKLLHAMRKMVGNQTEVLRNIHGASLQMEQSSFQISEISNEIADSTKAQQAQVLQVSEATGEVL
TISSSVRELSDMMLNESLVTEKEAEQGLDATNQNIDQMRLTVTEVNRAAEETSGLNQVAEEIHKIIASITDIADQTNLLA
LNAAIEAARAGEQGRGFAVVADEVRNLATRTSRETQEITRIISSLAEQVTATMGTMERIVERVNGGEQKTLQTAQIIQSM
ASSVRETSAASRRISDASKSQMERLTQLQQSQESLFHTIKDNGAKIGVTATISGDLNAVTKQFNRLLDNFTFSTETEIER
SAREQRQYPRANNGLLAVMREAGSQQEIQGITSDFSMTGLQLRIAAQAGLKEGQLVEVELMTPGTSLDEFEQQEPLKIAA
RVVWLRTNHEGAACGLEFNPLVPAQQQRLEACFRHFKKNSRFKS
>Mature_524_residues
METIWHYYLCLTIKTRLMILCLCYSLCIVAATVAGSLDSQIWQWGLTILFIAMGALFGGINIWGITSAIARTINNLETLA
QGNLSQEIVIKRTNEISKLLHAMRKMVGNQTEVLRNIHGASLQMEQSSFQISEISNEIADSTKAQQAQVLQVSEATGEVL
TISSSVRELSDMMLNESLVTEKEAEQGLDATNQNIDQMRLTVTEVNRAAEETSGLNQVAEEIHKIIASITDIADQTNLLA
LNAAIEAARAGEQGRGFAVVADEVRNLATRTSRETQEITRIISSLAEQVTATMGTMERIVERVNGGEQKTLQTAQIIQSM
ASSVRETSAASRRISDASKSQMERLTQLQQSQESLFHTIKDNGAKIGVTATISGDLNAVTKQFNRLLDNFTFSTETEIER
SAREQRQYPRANNGLLAVMREAGSQQEIQGITSDFSMTGLQLRIAAQAGLKEGQLVEVELMTPGTSLDEFEQQEPLKIAA
RVVWLRTNHEGAACGLEFNPLVPAQQQRLEACFRHFKKNSRFKS

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=325, Percent_Identity=29.8461538461538, Blast_Score=102, Evalue=5e-23,
Organism=Escherichia coli, GI1788194, Length=322, Percent_Identity=29.5031055900621, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1788195, Length=283, Percent_Identity=29.6819787985866, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1787690, Length=279, Percent_Identity=31.1827956989247, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1789453, Length=332, Percent_Identity=27.4096385542169, Blast_Score=85, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 57829; Mature: 57829

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METIWHYYLCLTIKTRLMILCLCYSLCIVAATVAGSLDSQIWQWGLTILFIAMGALFGGI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NIWGITSAIARTINNLETLAQGNLSQEIVIKRTNEISKLLHAMRKMVGNQTEVLRNIHGA
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC
SLQMEQSSFQISEISNEIADSTKAQQAQVLQVSEATGEVLTISSSVRELSDMMLNESLVT
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHH
EKEAEQGLDATNQNIDQMRLTVTEVNRAAEETSGLNQVAEEIHKIIASITDIADQTNLLA
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEE
LNAAIEAARAGEQGRGFAVVADEVRNLATRTSRETQEITRIISSLAEQVTATMGTMERIV
HHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERVNGGEQKTLQTAQIIQSMASSVRETSAASRRISDASKSQMERLTQLQQSQESLFHTIK
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DNGAKIGVTATISGDLNAVTKQFNRLLDNFTFSTETEIERSAREQRQYPRANNGLLAVMR
CCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHH
EAGSQQEIQGITSDFSMTGLQLRIAAQAGLKEGQLVEVELMTPGTSLDEFEQQEPLKIAA
HCCCHHHHHHHHCCCHHCCCEEEEEECCCCCCCCEEEEEEECCCCCHHHHHCCCHHHHHH
RVVWLRTNHEGAACGLEFNPLVPAQQQRLEACFRHFKKNSRFKS
EEEEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
METIWHYYLCLTIKTRLMILCLCYSLCIVAATVAGSLDSQIWQWGLTILFIAMGALFGGI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NIWGITSAIARTINNLETLAQGNLSQEIVIKRTNEISKLLHAMRKMVGNQTEVLRNIHGA
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC
SLQMEQSSFQISEISNEIADSTKAQQAQVLQVSEATGEVLTISSSVRELSDMMLNESLVT
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHH
EKEAEQGLDATNQNIDQMRLTVTEVNRAAEETSGLNQVAEEIHKIIASITDIADQTNLLA
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEE
LNAAIEAARAGEQGRGFAVVADEVRNLATRTSRETQEITRIISSLAEQVTATMGTMERIV
HHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERVNGGEQKTLQTAQIIQSMASSVRETSAASRRISDASKSQMERLTQLQQSQESLFHTIK
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DNGAKIGVTATISGDLNAVTKQFNRLLDNFTFSTETEIERSAREQRQYPRANNGLLAVMR
CCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHH
EAGSQQEIQGITSDFSMTGLQLRIAAQAGLKEGQLVEVELMTPGTSLDEFEQQEPLKIAA
HCCCHHHHHHHHCCCHHCCCEEEEEECCCCCCCCEEEEEEECCCCCHHHHHCCCHHHHHH
RVVWLRTNHEGAACGLEFNPLVPAQQQRLEACFRHFKKNSRFKS
EEEEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA