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The map label for this gene is ycaC [C]

Identifier: 197119177

GI number: 197119177

Start: 3233534

End: 3234097

Strand: Reverse

Name: ycaC [C]

Synonym: Gbem_2804

Alternate gene names: 197119177

Gene position: 3234097-3233534 (Counterclockwise)

Preceding gene: 197119178

Following gene: 197119165

Centisome position: 70.08

GC content: 60.11

Gene sequence:

>564_bases
ATGTCCCTGTTGGAGAGATTTTTTCTGGAGAGAGAGAACGCCCAGCTCGTGGTGGTCGACGTGCAGGAGAAGCTTTGCCG
GGCGATGGACGAGAAGGTGCTGGCCAAGCTGACCGGTAACATCTCCATACTTCTGGATGCGGCGGCGGAGCTCGGCATCC
CGGCTCTCGCGACCGAGCAGTACGTGAAGGGGCTCGGCGAGACGCTACCAGTCCTGAAGGAGAAACTTCAGGCGGCGAGC
CTGGAGAAGATGACCTTCAGTTGCTGCGGAGGCGAGGGTTTCATGGAGGCGCTGGAGAAAAACGGAAGGCGGCAGGTGAT
CCTGGTCGGCATGGAGACCCACGTTTGCGTGCTGCAGACCGCGCTGGAGCTTCTGTCTCGCGGTTACGTGGTGCATCTGG
TGTGCGATGCGGCAATGAGCCGTCGCAAGCAGAACTGGGAGATCGCCATTAAGACCATGACGGCGGCAGGGGTGGTCATG
ACCTCGACCGAGTCGGTGCTCTTCCAACTGCTGCGCGTGGCCGGCACCGAAGAGTTTAAGAAGCTTTCTAAACTCGTGCG
CTAG

Upstream 100 bases:

>100_bases
TCGGCATCAACCGCAACACCCTGAGAAAGAAGATCACCGAGCTCGGCATCGAGCTGCGCAAGGAATAGGCTACCCCCACC
CCATGACAAAGGAGTTACCC

Downstream 100 bases:

>100_bases
TCTGCTCCAGGCTGTCCACGAAGCGGCCGATCTGCTCCCTTTCCCCTTCGGCGATGGAGAGAAACTCAATGCCGAACCCC
GGGGGGAGCGCCGGCTTCTT

Product: amidohydrolase

Products: NA

Alternate protein names: Isochorismatase Family Protein; Isochorismatase Superfamily Hydrolase; Isochorismatase Hydrolase Family Protein; Nicotinamidase-Like Amidase; Isochorismatase Family Hydrolase; Isochorismatase Domain-Containing; Hydrolase; Amidase; Amidohydrolase; Hydrolase Isochorismatase; Amidase Related Nicotinamidase; YcaC Like Amidohydrolase; Isochorismatase Family; Nicotinamidase; YcaC-Related Amidohydrolase; Isochorismatase Domain-Containing A; Isochorismatase Hydrolase Family; Hydrolase Isochorismatase Family; Nicotinamidase-Related Amidase

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MSLLERFFLERENAQLVVVDVQEKLCRAMDEKVLAKLTGNISILLDAAAELGIPALATEQYVKGLGETLPVLKEKLQAAS
LEKMTFSCCGGEGFMEALEKNGRRQVILVGMETHVCVLQTALELLSRGYVVHLVCDAAMSRRKQNWEIAIKTMTAAGVVM
TSTESVLFQLLRVAGTEEFKKLSKLVR

Sequences:

>Translated_187_residues
MSLLERFFLERENAQLVVVDVQEKLCRAMDEKVLAKLTGNISILLDAAAELGIPALATEQYVKGLGETLPVLKEKLQAAS
LEKMTFSCCGGEGFMEALEKNGRRQVILVGMETHVCVLQTALELLSRGYVVHLVCDAAMSRRKQNWEIAIKTMTAAGVVM
TSTESVLFQLLRVAGTEEFKKLSKLVR
>Mature_186_residues
SLLERFFLERENAQLVVVDVQEKLCRAMDEKVLAKLTGNISILLDAAAELGIPALATEQYVKGLGETLPVLKEKLQAASL
EKMTFSCCGGEGFMEALEKNGRRQVILVGMETHVCVLQTALELLSRGYVVHLVCDAAMSRRKQNWEIAIKTMTAAGVVMT
STESVLFQLLRVAGTEEFKKLSKLVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI103471987, Length=168, Percent_Identity=37.5, Blast_Score=100, Evalue=7e-22,
Organism=Homo sapiens, GI209969695, Length=174, Percent_Identity=32.7586206896552, Blast_Score=84, Evalue=6e-17,
Organism=Homo sapiens, GI13376007, Length=190, Percent_Identity=30, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17540156, Length=182, Percent_Identity=39.010989010989, Blast_Score=119, Evalue=1e-27,
Organism=Drosophila melanogaster, GI19922924, Length=185, Percent_Identity=31.3513513513514, Blast_Score=94, Evalue=7e-20,
Organism=Drosophila melanogaster, GI21357489, Length=179, Percent_Identity=34.6368715083799, Blast_Score=91, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20662; Mature: 20531

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLERFFLERENAQLVVVDVQEKLCRAMDEKVLAKLTGNISILLDAAAELGIPALATEQ
CHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCHHEEEECHHHCCCCHHHHHH
YVKGLGETLPVLKEKLQAASLEKMTFSCCGGEGFMEALEKNGRRQVILVGMETHVCVLQT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEECCHHHHHHHH
ALELLSRGYVVHLVCDAAMSRRKQNWEIAIKTMTAAGVVMTSTESVLFQLLRVAGTEEFK
HHHHHHCCCEEEHHHHHHHHCCCCCCEEEEEEEHHHCEEEECHHHHHHHHHHHHCHHHHH
KLSKLVR
HHHHHCC
>Mature Secondary Structure 
SLLERFFLERENAQLVVVDVQEKLCRAMDEKVLAKLTGNISILLDAAAELGIPALATEQ
HHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCHHEEEECHHHCCCCHHHHHH
YVKGLGETLPVLKEKLQAASLEKMTFSCCGGEGFMEALEKNGRRQVILVGMETHVCVLQT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEECCHHHHHHHH
ALELLSRGYVVHLVCDAAMSRRKQNWEIAIKTMTAAGVVMTSTESVLFQLLRVAGTEEFK
HHHHHHCCCEEEHHHHHHHHCCCCCCEEEEEEEHHHCEEEECHHHHHHHHHHHHCHHHHH
KLSKLVR
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA