Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197119154

Identifier: 197119154

GI number: 197119154

Start: 3209612

End: 3210352

Strand: Direct

Name: 197119154

Synonym: Gbem_2781

Alternate gene names: NA

Gene position: 3209612-3210352 (Clockwise)

Preceding gene: 197119153

Following gene: 197119155

Centisome position: 69.55

GC content: 47.1

Gene sequence:

>741_bases
ATGTCTCCAATCAGAAGATTTGGCACCGATCGATTCTCCCTACCTATTAGTACACCCGGACCTCTGGGGCATCAGGATGC
AGCTTCTCCAGATTCTCCAGAATGGGTTATAGGTGAGACACCTGGTCCTTTAGGTTTTAATGATTATGCCGATCCTTCAT
ACAGATTCCGAATTGAAGATGGTAACAGCTGCAGATTGACTGACAAAGTACCAGTTCCACAACATATCAATCGCGGGTTA
ACAGCCCCCTCACCTGATTTTCTAGTCCTACTACTTGGCAAACCACGTGAACTCTACTCCAATGAATGTGAACGAGTAAC
TAACCCAATTCTCGCTTCGCAGATGTTAGTGTCGCAGGTGGGTCCATTTAAAGTACACGGACTGCGCCCGGCAATTGAGA
GTCTAAAAATGATCTTAAATGAGATAAGACAAGAGCATCCAAATGTATATGCTTCATTGGGATCTTCCGGGATGCTCTGT
TGCCGTAAACAGCGAGGATCTCCACGGATTAGCAGTCACTCTTGGGGAACCGCAATTGACATCAATATAAAGGGAGCACT
CGATGAACGAGGAGACGGCAGAGTACAATATGGGTTGACCTTGATTGCTCCCTTTTTCAATCGTTACGGGTGGGTTTGGG
GTGCTGCATTTCGTAAGGAGGACGGGATGCACTTTGAAGCCAGCAAAAGCAAGCTCCTACAGTGGGAAGCGGAAGGAAAG
ATCCACAGTCAGCGTACGTGA

Upstream 100 bases:

>100_bases
TTTGTTTTAGTTTTCGGTTGTTCTTATTGACATTGGGCCACACTCTGGTGAAATCTCTTTTTGCAGCATGAAAGAAAGTC
AATCTTTACGGGGGATGCCC

Downstream 100 bases:

>100_bases
AGGAGTAGCTAACCCACCGGGTTTAATCCGTACACGAAAGTGTGTGGGTAGTGCGAGGGCCGCGCTTGCCACAAAAGGAG
GCACAGCATGAGTACACGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MSPIRRFGTDRFSLPISTPGPLGHQDAASPDSPEWVIGETPGPLGFNDYADPSYRFRIEDGNSCRLTDKVPVPQHINRGL
TAPSPDFLVLLLGKPRELYSNECERVTNPILASQMLVSQVGPFKVHGLRPAIESLKMILNEIRQEHPNVYASLGSSGMLC
CRKQRGSPRISSHSWGTAIDINIKGALDERGDGRVQYGLTLIAPFFNRYGWVWGAAFRKEDGMHFEASKSKLLQWEAEGK
IHSQRT

Sequences:

>Translated_246_residues
MSPIRRFGTDRFSLPISTPGPLGHQDAASPDSPEWVIGETPGPLGFNDYADPSYRFRIEDGNSCRLTDKVPVPQHINRGL
TAPSPDFLVLLLGKPRELYSNECERVTNPILASQMLVSQVGPFKVHGLRPAIESLKMILNEIRQEHPNVYASLGSSGMLC
CRKQRGSPRISSHSWGTAIDINIKGALDERGDGRVQYGLTLIAPFFNRYGWVWGAAFRKEDGMHFEASKSKLLQWEAEGK
IHSQRT
>Mature_245_residues
SPIRRFGTDRFSLPISTPGPLGHQDAASPDSPEWVIGETPGPLGFNDYADPSYRFRIEDGNSCRLTDKVPVPQHINRGLT
APSPDFLVLLLGKPRELYSNECERVTNPILASQMLVSQVGPFKVHGLRPAIESLKMILNEIRQEHPNVYASLGSSGMLCC
RKQRGSPRISSHSWGTAIDINIKGALDERGDGRVQYGLTLIAPFFNRYGWVWGAAFRKEDGMHFEASKSKLLQWEAEGKI
HSQRT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27399; Mature: 27268

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPIRRFGTDRFSLPISTPGPLGHQDAASPDSPEWVIGETPGPLGFNDYADPSYRFRIED
CCCHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECC
GNSCRLTDKVPVPQHINRGLTAPSPDFLVLLLGKPRELYSNECERVTNPILASQMLVSQV
CCEEEEECCCCCHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHC
GPFKVHGLRPAIESLKMILNEIRQEHPNVYASLGSSGMLCCRKQRGSPRISSHSWGTAID
CCEEEECCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEECCCCCCCCCCCCCCEEEE
INIKGALDERGDGRVQYGLTLIAPFFNRYGWVWGAAFRKEDGMHFEASKSKLLQWEAEGK
EEEEECCCCCCCCEEEEHHHHHHHHHHHHCCHHHHHHHCCCCCEEECCCCCEEEEECCCC
IHSQRT
CCCCCC
>Mature Secondary Structure 
SPIRRFGTDRFSLPISTPGPLGHQDAASPDSPEWVIGETPGPLGFNDYADPSYRFRIED
CCHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECC
GNSCRLTDKVPVPQHINRGLTAPSPDFLVLLLGKPRELYSNECERVTNPILASQMLVSQV
CCEEEEECCCCCHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHC
GPFKVHGLRPAIESLKMILNEIRQEHPNVYASLGSSGMLCCRKQRGSPRISSHSWGTAID
CCEEEECCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEECCCCCCCCCCCCCCEEEE
INIKGALDERGDGRVQYGLTLIAPFFNRYGWVWGAAFRKEDGMHFEASKSKLLQWEAEGK
EEEEECCCCCCCCEEEEHHHHHHHHHHHHCCHHHHHHHCCCCCEEECCCCCEEEEECCCC
IHSQRT
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA