| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is rhlB [H]
Identifier: 197119152
GI number: 197119152
Start: 3207034
End: 3208482
Strand: Direct
Name: rhlB [H]
Synonym: Gbem_2779
Alternate gene names: 197119152
Gene position: 3207034-3208482 (Clockwise)
Preceding gene: 197119150
Following gene: 197119153
Centisome position: 69.49
GC content: 61.08
Gene sequence:
>1449_bases ATGAAATTCACCGAGCTGCAGATACCAGCGGAGGTCCAAAAAGGGATCGACGAGACCGGTTTCACCCAATGTACACCAAT CCAGGAAAAGGCACTTCCCCTGGCTCTCACCGGGAAAGACGTCGCAGGGCAGGCACAGACCGGCACCGGCAAAACGGCCA CCTTCCTCATCTCCATCTTCACCAAGCTCCTCAGCCAGGCAAAAACCGGCGGCGAACACCATCCCAGAGCCCTAATCCTC GCTCCCACCCGCGAACTGGTGGTCCAGATCGAAAAGGACGCCCAGGCACTTGGCAAATACACCGGCTTCAACATCCAGGC GATCTACGGCGGCGTCGACTACATGAAGCAGCGCGACGCCCTGAAGGCTGGCGCCGACATCGTCATCGGCACGCCGGGCC GCCTCATCGACTACTTGAAACAGAAGGTCTACTCCGTGAAGGACGTCGAGGCGCTGGTCATCGACGAGGCCGACCGGATG TTCGACATGGGATTCATAGCGGACCTCCGCTTCATCCTGAGAAGGCTTCCCCCCTACGACAAGAGGCAAAACCTCCTCTT CTCCGCGACCCTTAACACCCGCGTTATGGAACTCGCCTACGAGTTCATGAACATGCCGGAGAAGGTGTCGGTGACCCCCG AGCAGATGACCGCTGAGCGTGTCGAGCAGGTGCTCTACCACGTTTCGCGCAAAGAGAAGTTTCCGCTACTCTTAGGCCTG CTCAGGAAGATGGGTATGGAGCGGACCATGATCTTCGTGAACACGAAGCGCGAGGCGGAGTACCTGCAGGACCGCCTGAA CGCGAACGAATTCCCGGGCAAGGTCATCTCTGGCGACGTCGAACAGAGAAAGCGGATGAAGATCCTGGCGGATTTCAAGG ATGGAACCCTTCCCATCATGATCGCCACCGACGTCGCCTCCCGCGGCATTCACATCGAGGGAGTCTCCCACGTCATCAAC TATGACCTGCCCCAGGACTGCGAGGACTACGTGCACCGCATCGGCAGGACCGCACGCGCCGGAGCAGAAGGGATGGCGAT CTCGTTCGCGGACGAGGACGGCGCTTTCTACATCGAGCCGATTGAGGATTTCATCAAGCAGAAGATCCCCACCGAGTGGG CCGAGGACGACATGTTCGTCCACGACTACAAAAGGACCAAGCCCCGCCCCCGCACCGAGTTGCCTCACGGCAGGGGCGGC AAGCCCGGCGACAGGGGAAGGTCGGGCGACAAAGGAAGACCGGCAGGGCGAGGAAGGTCCGGCTCGGGGAGCAGCAAACC CGCAGCAGGCGAGAAGAAAGTCGCCGCCGAAAAGCCCGCCACCGAGACAGTCGCAACGGCAGGTGAAGGAACCGAGGCGG CCAAGCGCAAGAGACCGCGCCGCCGCAAGCCGAAGAAGGCTGCCGAGGGCACCGAGTCCAATCAACCGAGCCAGCCCGAT CAGCCGTGA
Upstream 100 bases:
>100_bases GGTGAAGGGGATTTTGTATGGCGGCACCCATTCCTTGCCATTTTTAACGGGACGTGTTAATTATATCCGGTTGAAATAAG GCAAAAAAAGGAAAGCAAGC
Downstream 100 bases:
>100_bases CCGGGAAGGGACGCCCCGCCAAGAAGTACTCCCAGGCAGGGAGGGTGCATGACGTGATACGCCTCATCGAGGCGCGTCAC GGCATCTCCATTTCCGAGCT
Product: ATP-dependent RNA helicase RhlB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 482; Mature: 482
Protein sequence:
>482_residues MKFTELQIPAEVQKGIDETGFTQCTPIQEKALPLALTGKDVAGQAQTGTGKTATFLISIFTKLLSQAKTGGEHHPRALIL APTRELVVQIEKDAQALGKYTGFNIQAIYGGVDYMKQRDALKAGADIVIGTPGRLIDYLKQKVYSVKDVEALVIDEADRM FDMGFIADLRFILRRLPPYDKRQNLLFSATLNTRVMELAYEFMNMPEKVSVTPEQMTAERVEQVLYHVSRKEKFPLLLGL LRKMGMERTMIFVNTKREAEYLQDRLNANEFPGKVISGDVEQRKRMKILADFKDGTLPIMIATDVASRGIHIEGVSHVIN YDLPQDCEDYVHRIGRTARAGAEGMAISFADEDGAFYIEPIEDFIKQKIPTEWAEDDMFVHDYKRTKPRPRTELPHGRGG KPGDRGRSGDKGRPAGRGRSGSGSSKPAAGEKKVAAEKPATETVATAGEGTEAAKRKRPRRRKPKKAAEGTESNQPSQPD QP
Sequences:
>Translated_482_residues MKFTELQIPAEVQKGIDETGFTQCTPIQEKALPLALTGKDVAGQAQTGTGKTATFLISIFTKLLSQAKTGGEHHPRALIL APTRELVVQIEKDAQALGKYTGFNIQAIYGGVDYMKQRDALKAGADIVIGTPGRLIDYLKQKVYSVKDVEALVIDEADRM FDMGFIADLRFILRRLPPYDKRQNLLFSATLNTRVMELAYEFMNMPEKVSVTPEQMTAERVEQVLYHVSRKEKFPLLLGL LRKMGMERTMIFVNTKREAEYLQDRLNANEFPGKVISGDVEQRKRMKILADFKDGTLPIMIATDVASRGIHIEGVSHVIN YDLPQDCEDYVHRIGRTARAGAEGMAISFADEDGAFYIEPIEDFIKQKIPTEWAEDDMFVHDYKRTKPRPRTELPHGRGG KPGDRGRSGDKGRPAGRGRSGSGSSKPAAGEKKVAAEKPATETVATAGEGTEAAKRKRPRRRKPKKAAEGTESNQPSQPD QP >Mature_482_residues MKFTELQIPAEVQKGIDETGFTQCTPIQEKALPLALTGKDVAGQAQTGTGKTATFLISIFTKLLSQAKTGGEHHPRALIL APTRELVVQIEKDAQALGKYTGFNIQAIYGGVDYMKQRDALKAGADIVIGTPGRLIDYLKQKVYSVKDVEALVIDEADRM FDMGFIADLRFILRRLPPYDKRQNLLFSATLNTRVMELAYEFMNMPEKVSVTPEQMTAERVEQVLYHVSRKEKFPLLLGL LRKMGMERTMIFVNTKREAEYLQDRLNANEFPGKVISGDVEQRKRMKILADFKDGTLPIMIATDVASRGIHIEGVSHVIN YDLPQDCEDYVHRIGRTARAGAEGMAISFADEDGAFYIEPIEDFIKQKIPTEWAEDDMFVHDYKRTKPRPRTELPHGRGG KPGDRGRSGDKGRPAGRGRSGSGSSKPAAGEKKVAAEKPATETVATAGEGTEAAKRKRPRRRKPKKAAEGTESNQPSQPD QP
Specific function: Can carry out ATP-dependent unwinding of double stranded RNA. Has a role in RNA decay. Involved in the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI262118318, Length=390, Percent_Identity=37.1794871794872, Blast_Score=256, Evalue=2e-68, Organism=Homo sapiens, GI13518015, Length=390, Percent_Identity=37.1794871794872, Blast_Score=256, Evalue=2e-68, Organism=Homo sapiens, GI262231852, Length=390, Percent_Identity=37.1794871794872, Blast_Score=256, Evalue=2e-68, Organism=Homo sapiens, GI216548263, Length=390, Percent_Identity=37.1794871794872, Blast_Score=256, Evalue=2e-68, Organism=Homo sapiens, GI301171467, Length=419, Percent_Identity=35.5608591885441, Blast_Score=253, Evalue=2e-67, Organism=Homo sapiens, GI87196351, Length=400, Percent_Identity=36.25, Blast_Score=249, Evalue=3e-66, Organism=Homo sapiens, GI301171475, Length=400, Percent_Identity=36.25, Blast_Score=249, Evalue=4e-66, Organism=Homo sapiens, GI169881239, Length=402, Percent_Identity=36.0696517412935, Blast_Score=248, Evalue=9e-66, Organism=Homo sapiens, GI13514809, Length=402, Percent_Identity=36.0696517412935, Blast_Score=248, Evalue=9e-66, Organism=Homo sapiens, GI7661920, Length=368, Percent_Identity=36.6847826086957, Blast_Score=244, Evalue=1e-64, Organism=Homo sapiens, GI148613856, Length=351, Percent_Identity=39.8860398860399, Blast_Score=243, Evalue=2e-64, Organism=Homo sapiens, GI38201710, Length=351, Percent_Identity=39.8860398860399, Blast_Score=243, Evalue=2e-64, Organism=Homo sapiens, GI41327771, Length=386, Percent_Identity=36.7875647668394, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI4758138, Length=369, Percent_Identity=37.3983739837398, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI222352149, Length=401, Percent_Identity=37.6558603491272, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI45446747, Length=349, Percent_Identity=37.5358166189112, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI45446743, Length=349, Percent_Identity=37.5358166189112, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI20149629, Length=380, Percent_Identity=37.6315789473684, Blast_Score=235, Evalue=7e-62, Organism=Homo sapiens, GI83700235, Length=365, Percent_Identity=38.3561643835616, Blast_Score=229, Evalue=5e-60, Organism=Homo sapiens, GI41327773, Length=361, Percent_Identity=36.2880886426593, Blast_Score=225, Evalue=8e-59, Organism=Homo sapiens, GI224593278, Length=357, Percent_Identity=35.2941176470588, Blast_Score=223, Evalue=2e-58, Organism=Homo sapiens, GI4503529, Length=369, Percent_Identity=36.8563685636856, Blast_Score=223, Evalue=2e-58, Organism=Homo sapiens, GI51094101, Length=370, Percent_Identity=37.2972972972973, Blast_Score=223, Evalue=4e-58, Organism=Homo sapiens, GI164419743, Length=370, Percent_Identity=37.2972972972973, Blast_Score=223, Evalue=4e-58, Organism=Homo sapiens, GI31542656, Length=375, Percent_Identity=36.8, Blast_Score=212, Evalue=6e-55, Organism=Homo sapiens, GI41327776, Length=376, Percent_Identity=34.5744680851064, Blast_Score=206, Evalue=4e-53, Organism=Homo sapiens, GI21071032, Length=386, Percent_Identity=32.6424870466321, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI164664518, Length=363, Percent_Identity=30.8539944903581, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI55749865, Length=403, Percent_Identity=33.7468982630273, Blast_Score=202, Evalue=5e-52, Organism=Homo sapiens, GI50659095, Length=371, Percent_Identity=34.5013477088949, Blast_Score=196, Evalue=3e-50, Organism=Homo sapiens, GI13514831, Length=354, Percent_Identity=33.8983050847458, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI188035877, Length=392, Percent_Identity=30.3571428571429, Blast_Score=190, Evalue=3e-48, Organism=Homo sapiens, GI21040371, Length=366, Percent_Identity=31.4207650273224, Blast_Score=188, Evalue=8e-48, Organism=Homo sapiens, GI13129006, Length=357, Percent_Identity=33.6134453781513, Blast_Score=187, Evalue=3e-47, Organism=Homo sapiens, GI6005743, Length=380, Percent_Identity=33.4210526315789, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI9506931, Length=400, Percent_Identity=32, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI8922886, Length=380, Percent_Identity=32.3684210526316, Blast_Score=183, Evalue=3e-46, Organism=Homo sapiens, GI164419732, Length=382, Percent_Identity=31.6753926701571, Blast_Score=183, Evalue=3e-46, Organism=Homo sapiens, GI4758112, Length=366, Percent_Identity=30.6010928961749, Blast_Score=182, Evalue=8e-46, Organism=Homo sapiens, GI18375623, Length=366, Percent_Identity=30.6010928961749, Blast_Score=182, Evalue=8e-46, Organism=Homo sapiens, GI38327634, Length=333, Percent_Identity=34.8348348348348, Blast_Score=180, Evalue=2e-45, Organism=Homo sapiens, GI41327779, Length=384, Percent_Identity=34.375, Blast_Score=180, Evalue=2e-45, Organism=Homo sapiens, GI62241022, Length=363, Percent_Identity=33.8842975206612, Blast_Score=177, Evalue=3e-44, Organism=Homo sapiens, GI38569505, Length=370, Percent_Identity=33.7837837837838, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI256223453, Length=359, Percent_Identity=31.7548746518106, Blast_Score=173, Evalue=3e-43, Organism=Homo sapiens, GI38569503, Length=370, Percent_Identity=33.7837837837838, Blast_Score=173, Evalue=3e-43, Organism=Homo sapiens, GI62241024, Length=342, Percent_Identity=33.0409356725146, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI17505907, Length=412, Percent_Identity=28.8834951456311, Blast_Score=156, Evalue=4e-38, Organism=Homo sapiens, GI9966805, Length=300, Percent_Identity=33.3333333333333, Blast_Score=155, Evalue=9e-38, Organism=Homo sapiens, GI154759257, Length=408, Percent_Identity=28.921568627451, Blast_Score=146, Evalue=5e-35, Organism=Homo sapiens, GI256773275, Length=377, Percent_Identity=29.1777188328912, Blast_Score=145, Evalue=6e-35, Organism=Homo sapiens, GI4826686, Length=333, Percent_Identity=29.1291291291291, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI20336298, Length=191, Percent_Identity=37.17277486911, Blast_Score=112, Evalue=6e-25, Organism=Escherichia coli, GI1790214, Length=414, Percent_Identity=49.0338164251208, Blast_Score=385, Evalue=1e-108, Organism=Escherichia coli, GI1787016, Length=371, Percent_Identity=40.4312668463612, Blast_Score=287, Evalue=1e-78, Organism=Escherichia coli, GI87082221, Length=369, Percent_Identity=38.2113821138211, Blast_Score=250, Evalue=1e-67, Organism=Escherichia coli, GI1788930, Length=359, Percent_Identity=38.1615598885794, Blast_Score=228, Evalue=6e-61, Organism=Escherichia coli, GI1787605, Length=374, Percent_Identity=36.3636363636364, Blast_Score=227, Evalue=1e-60, Organism=Caenorhabditis elegans, GI71995724, Length=368, Percent_Identity=37.7717391304348, Blast_Score=254, Evalue=6e-68, Organism=Caenorhabditis elegans, GI17507121, Length=368, Percent_Identity=37.7717391304348, Blast_Score=254, Evalue=7e-68, Organism=Caenorhabditis elegans, GI71987143, Length=368, Percent_Identity=36.4130434782609, Blast_Score=251, Evalue=9e-67, Organism=Caenorhabditis elegans, GI32565321, Length=385, Percent_Identity=36.8831168831169, Blast_Score=243, Evalue=2e-64, Organism=Caenorhabditis elegans, GI17507877, Length=395, Percent_Identity=36.7088607594937, Blast_Score=241, Evalue=6e-64, Organism=Caenorhabditis elegans, GI17510307, Length=388, Percent_Identity=37.8865979381443, Blast_Score=241, Evalue=9e-64, Organism=Caenorhabditis elegans, GI17510309, Length=388, Percent_Identity=37.8865979381443, Blast_Score=240, Evalue=1e-63, Organism=Caenorhabditis elegans, GI71995514, Length=388, Percent_Identity=37.8865979381443, Blast_Score=239, Evalue=2e-63, Organism=Caenorhabditis elegans, GI71995718, Length=392, Percent_Identity=37.5, Blast_Score=239, Evalue=2e-63, Organism=Caenorhabditis elegans, GI17507881, Length=368, Percent_Identity=35.3260869565217, Blast_Score=229, Evalue=3e-60, Organism=Caenorhabditis elegans, GI17507879, Length=395, Percent_Identity=35.4430379746835, Blast_Score=228, Evalue=4e-60, Organism=Caenorhabditis elegans, GI115533224, Length=431, Percent_Identity=33.1786542923434, Blast_Score=226, Evalue=1e-59, Organism=Caenorhabditis elegans, GI17510559, Length=381, Percent_Identity=32.0209973753281, Blast_Score=221, Evalue=9e-58, Organism=Caenorhabditis elegans, GI86570094, Length=334, Percent_Identity=37.7245508982036, Blast_Score=220, Evalue=1e-57, Organism=Caenorhabditis elegans, GI17555296, Length=371, Percent_Identity=36.3881401617251, Blast_Score=213, Evalue=2e-55, Organism=Caenorhabditis elegans, GI71999644, Length=385, Percent_Identity=33.2467532467532, Blast_Score=211, Evalue=1e-54, Organism=Caenorhabditis elegans, GI71999646, Length=385, Percent_Identity=33.2467532467532, Blast_Score=210, Evalue=1e-54, Organism=Caenorhabditis elegans, GI17552642, Length=353, Percent_Identity=34.8441926345609, Blast_Score=203, Evalue=1e-52, Organism=Caenorhabditis elegans, GI17509811, Length=352, Percent_Identity=32.9545454545455, Blast_Score=203, Evalue=2e-52, Organism=Caenorhabditis elegans, GI17552114, Length=369, Percent_Identity=30.0813008130081, Blast_Score=196, Evalue=3e-50, Organism=Caenorhabditis elegans, GI17537549, Length=352, Percent_Identity=35.2272727272727, Blast_Score=194, Evalue=6e-50, Organism=Caenorhabditis elegans, GI17507641, Length=390, Percent_Identity=32.5641025641026, Blast_Score=188, Evalue=6e-48, Organism=Caenorhabditis elegans, GI17507945, Length=363, Percent_Identity=34.1597796143251, Blast_Score=185, Evalue=6e-47, Organism=Caenorhabditis elegans, GI71982858, Length=366, Percent_Identity=31.9672131147541, Blast_Score=183, Evalue=1e-46, Organism=Caenorhabditis elegans, GI115532548, Length=388, Percent_Identity=32.4742268041237, Blast_Score=182, Evalue=4e-46, Organism=Caenorhabditis elegans, GI115532546, Length=388, Percent_Identity=32.4742268041237, Blast_Score=182, Evalue=4e-46, Organism=Caenorhabditis elegans, GI17536103, Length=397, Percent_Identity=32.9974811083123, Blast_Score=179, Evalue=4e-45, Organism=Caenorhabditis elegans, GI17536099, Length=396, Percent_Identity=33.0808080808081, Blast_Score=178, Evalue=7e-45, Organism=Caenorhabditis elegans, GI17536101, Length=396, Percent_Identity=33.0808080808081, Blast_Score=178, Evalue=7e-45, Organism=Caenorhabditis elegans, GI32564046, Length=377, Percent_Identity=32.3607427055703, Blast_Score=174, Evalue=7e-44, Organism=Caenorhabditis elegans, GI17505370, Length=344, Percent_Identity=33.4302325581395, Blast_Score=174, Evalue=8e-44, Organism=Caenorhabditis elegans, GI25148203, Length=420, Percent_Identity=28.3333333333333, Blast_Score=164, Evalue=8e-41, Organism=Caenorhabditis elegans, GI193208216, Length=385, Percent_Identity=31.4285714285714, Blast_Score=164, Evalue=1e-40, Organism=Caenorhabditis elegans, GI17553716, Length=365, Percent_Identity=29.041095890411, Blast_Score=160, Evalue=2e-39, Organism=Caenorhabditis elegans, GI71990816, Length=396, Percent_Identity=29.2929292929293, Blast_Score=153, Evalue=2e-37, Organism=Caenorhabditis elegans, GI193206561, Length=358, Percent_Identity=28.2122905027933, Blast_Score=144, Evalue=1e-34, Organism=Caenorhabditis elegans, GI17508543, Length=381, Percent_Identity=25.9842519685039, Blast_Score=128, Evalue=5e-30, Organism=Caenorhabditis elegans, GI17556951, Length=346, Percent_Identity=29.1907514450867, Blast_Score=126, Evalue=2e-29, Organism=Caenorhabditis elegans, GI25148291, Length=337, Percent_Identity=26.4094955489614, Blast_Score=121, Evalue=9e-28, Organism=Caenorhabditis elegans, GI25148205, Length=347, Percent_Identity=26.8011527377522, Blast_Score=117, Evalue=1e-26, Organism=Caenorhabditis elegans, GI71997889, Length=408, Percent_Identity=26.7156862745098, Blast_Score=115, Evalue=5e-26, Organism=Caenorhabditis elegans, GI71982862, Length=205, Percent_Identity=30.2439024390244, Blast_Score=96, Evalue=4e-20, Organism=Caenorhabditis elegans, GI71987152, Length=104, Percent_Identity=40.3846153846154, Blast_Score=92, Evalue=8e-19, Organism=Saccharomyces cerevisiae, GI6324217, Length=378, Percent_Identity=40.4761904761905, Blast_Score=256, Evalue=4e-69, Organism=Saccharomyces cerevisiae, GI6325138, Length=386, Percent_Identity=37.0466321243523, Blast_Score=249, Evalue=6e-67, Organism=Saccharomyces cerevisiae, GI6324778, Length=419, Percent_Identity=35.0835322195704, Blast_Score=246, Evalue=7e-66, Organism=Saccharomyces cerevisiae, GI6321856, Length=380, Percent_Identity=38.4210526315789, Blast_Score=242, Evalue=1e-64, Organism=Saccharomyces cerevisiae, GI6320224, Length=382, Percent_Identity=37.17277486911, Blast_Score=239, Evalue=6e-64, Organism=Saccharomyces cerevisiae, GI6323021, Length=358, Percent_Identity=36.8715083798883, Blast_Score=235, Evalue=1e-62, Organism=Saccharomyces cerevisiae, GI6321360, Length=359, Percent_Identity=39.8328690807799, Blast_Score=227, Evalue=3e-60, Organism=Saccharomyces cerevisiae, GI6320041, Length=394, Percent_Identity=31.9796954314721, Blast_Score=217, Evalue=3e-57, Organism=Saccharomyces cerevisiae, GI6322912, Length=369, Percent_Identity=34.9593495934959, Blast_Score=215, Evalue=1e-56, Organism=Saccharomyces cerevisiae, GI6322323, Length=369, Percent_Identity=34.9593495934959, Blast_Score=215, Evalue=1e-56, Organism=Saccharomyces cerevisiae, GI6323947, Length=347, Percent_Identity=36.0230547550432, Blast_Score=211, Evalue=3e-55, Organism=Saccharomyces cerevisiae, GI6324620, Length=394, Percent_Identity=32.741116751269, Blast_Score=197, Evalue=4e-51, Organism=Saccharomyces cerevisiae, GI6320449, Length=365, Percent_Identity=35.6164383561644, Blast_Score=191, Evalue=3e-49, Organism=Saccharomyces cerevisiae, GI6320173, Length=413, Percent_Identity=31.9612590799031, Blast_Score=187, Evalue=3e-48, Organism=Saccharomyces cerevisiae, GI6322427, Length=357, Percent_Identity=33.0532212885154, Blast_Score=185, Evalue=1e-47, Organism=Saccharomyces cerevisiae, GI6321963, Length=384, Percent_Identity=33.3333333333333, Blast_Score=175, Evalue=1e-44, Organism=Saccharomyces cerevisiae, GI6320119, Length=354, Percent_Identity=31.638418079096, Blast_Score=175, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6319714, Length=392, Percent_Identity=32.3979591836735, Blast_Score=171, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6320400, Length=385, Percent_Identity=34.2857142857143, Blast_Score=170, Evalue=4e-43, Organism=Saccharomyces cerevisiae, GI6321111, Length=361, Percent_Identity=31.5789473684211, Blast_Score=165, Evalue=1e-41, Organism=Saccharomyces cerevisiae, GI6321267, Length=371, Percent_Identity=33.1536388140162, Blast_Score=156, Evalue=7e-39, Organism=Saccharomyces cerevisiae, GI6323306, Length=428, Percent_Identity=28.2710280373832, Blast_Score=153, Evalue=5e-38, Organism=Saccharomyces cerevisiae, GI6319618, Length=401, Percent_Identity=29.426433915212, Blast_Score=152, Evalue=1e-37, Organism=Saccharomyces cerevisiae, GI6322876, Length=424, Percent_Identity=28.3018867924528, Blast_Score=121, Evalue=3e-28, Organism=Drosophila melanogaster, GI24584399, Length=349, Percent_Identity=38.3954154727794, Blast_Score=259, Evalue=4e-69, Organism=Drosophila melanogaster, GI24662330, Length=357, Percent_Identity=38.0952380952381, Blast_Score=243, Evalue=3e-64, Organism=Drosophila melanogaster, GI24645031, Length=368, Percent_Identity=36.9565217391304, Blast_Score=241, Evalue=8e-64, Organism=Drosophila melanogaster, GI17985987, Length=392, Percent_Identity=35.7142857142857, Blast_Score=239, Evalue=2e-63, Organism=Drosophila melanogaster, GI28574962, Length=359, Percent_Identity=37.883008356546, Blast_Score=237, Evalue=1e-62, Organism=Drosophila melanogaster, GI24584994, Length=384, Percent_Identity=37.2395833333333, Blast_Score=233, Evalue=2e-61, Organism=Drosophila melanogaster, GI21355075, Length=365, Percent_Identity=39.4520547945205, Blast_Score=233, Evalue=3e-61, Organism=Drosophila melanogaster, GI18857967, Length=366, Percent_Identity=36.3387978142077, Blast_Score=228, Evalue=8e-60, Organism=Drosophila melanogaster, GI21356161, Length=382, Percent_Identity=35.0785340314136, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI24582080, Length=369, Percent_Identity=36.3143631436314, Blast_Score=225, Evalue=4e-59, Organism=Drosophila melanogaster, GI24582078, Length=369, Percent_Identity=36.3143631436314, Blast_Score=225, Evalue=4e-59, Organism=Drosophila melanogaster, GI17136248, Length=369, Percent_Identity=36.3143631436314, Blast_Score=225, Evalue=4e-59, Organism=Drosophila melanogaster, GI24582075, Length=369, Percent_Identity=36.3143631436314, Blast_Score=225, Evalue=4e-59, Organism=Drosophila melanogaster, GI24644479, Length=371, Percent_Identity=34.7708894878706, Blast_Score=224, Evalue=7e-59, Organism=Drosophila melanogaster, GI24644483, Length=371, Percent_Identity=34.7708894878706, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI281361218, Length=371, Percent_Identity=34.7708894878706, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI24644481, Length=371, Percent_Identity=34.7708894878706, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI24644487, Length=371, Percent_Identity=34.7708894878706, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI45551833, Length=371, Percent_Identity=34.7708894878706, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI24644485, Length=371, Percent_Identity=34.7708894878706, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI24642151, Length=344, Percent_Identity=37.2093023255814, Blast_Score=222, Evalue=4e-58, Organism=Drosophila melanogaster, GI24585582, Length=417, Percent_Identity=34.2925659472422, Blast_Score=218, Evalue=5e-57, Organism=Drosophila melanogaster, GI28575014, Length=367, Percent_Identity=32.9700272479564, Blast_Score=198, Evalue=7e-51, Organism=Drosophila melanogaster, GI17977678, Length=363, Percent_Identity=33.0578512396694, Blast_Score=195, Evalue=5e-50, Organism=Drosophila melanogaster, GI281365720, Length=314, Percent_Identity=36.624203821656, Blast_Score=192, Evalue=4e-49, Organism=Drosophila melanogaster, GI24583281, Length=361, Percent_Identity=30.4709141274238, Blast_Score=191, Evalue=1e-48, Organism=Drosophila melanogaster, GI24583279, Length=361, Percent_Identity=30.4709141274238, Blast_Score=191, Evalue=1e-48, Organism=Drosophila melanogaster, GI17136814, Length=346, Percent_Identity=35.5491329479769, Blast_Score=189, Evalue=3e-48, Organism=Drosophila melanogaster, GI24642822, Length=372, Percent_Identity=32.258064516129, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI24643725, Length=424, Percent_Identity=30.4245283018868, Blast_Score=182, Evalue=3e-46, Organism=Drosophila melanogaster, GI28571808, Length=339, Percent_Identity=33.3333333333333, Blast_Score=182, Evalue=3e-46, Organism=Drosophila melanogaster, GI28571809, Length=339, Percent_Identity=33.3333333333333, Blast_Score=182, Evalue=3e-46, Organism=Drosophila melanogaster, GI24581954, Length=366, Percent_Identity=31.1475409836066, Blast_Score=182, Evalue=6e-46, Organism=Drosophila melanogaster, GI24581952, Length=366, Percent_Identity=31.1475409836066, Blast_Score=182, Evalue=6e-46, Organism=Drosophila melanogaster, GI24581956, Length=366, Percent_Identity=31.1475409836066, Blast_Score=182, Evalue=6e-46, Organism=Drosophila melanogaster, GI20130173, Length=441, Percent_Identity=30.8390022675737, Blast_Score=181, Evalue=1e-45, Organism=Drosophila melanogaster, GI17647335, Length=416, Percent_Identity=28.125, Blast_Score=177, Evalue=2e-44, Organism=Drosophila melanogaster, GI24666101, Length=428, Percent_Identity=31.5420560747664, Blast_Score=164, Evalue=9e-41, Organism=Drosophila melanogaster, GI21355559, Length=386, Percent_Identity=33.9378238341969, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI19920478, Length=355, Percent_Identity=28.7323943661972, Blast_Score=144, Evalue=2e-34, Organism=Drosophila melanogaster, GI28571338, Length=443, Percent_Identity=27.5395033860045, Blast_Score=143, Evalue=2e-34, Organism=Drosophila melanogaster, GI18859659, Length=443, Percent_Identity=27.5395033860045, Blast_Score=143, Evalue=2e-34, Organism=Drosophila melanogaster, GI17136666, Length=416, Percent_Identity=27.6442307692308, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI24668515, Length=327, Percent_Identity=28.4403669724771, Blast_Score=116, Evalue=3e-26, Organism=Drosophila melanogaster, GI24640164, Length=402, Percent_Identity=24.3781094527363, Blast_Score=108, Evalue=8e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 53579; Mature: 53579
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFTELQIPAEVQKGIDETGFTQCTPIQEKALPLALTGKDVAGQAQTGTGKTATFLISIF CCCCCCCCCHHHHCCCCCCCCCCCCCHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHH TKLLSQAKTGGEHHPRALILAPTRELVVQIEKDAQALGKYTGFNIQAIYGGVDYMKQRDA HHHHHHHHCCCCCCCCEEEEECCHHHHEEEHHHHHHHHHHCCCEEEEEECCHHHHHHHHH LKAGADIVIGTPGRLIDYLKQKVYSVKDVEALVIDEADRMFDMGFIADLRFILRRLPPYD HHCCCCEEEECCHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHCCCCC KRQNLLFSATLNTRVMELAYEFMNMPEKVSVTPEQMTAERVEQVLYHVSRKEKFPLLLGL CCCCEEEEEHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH LRKMGMERTMIFVNTKREAEYLQDRLNANEFPGKVISGDVEQRKRMKILADFKDGTLPIM HHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCEEEE IATDVASRGIHIEGVSHVINYDLPQDCEDYVHRIGRTARAGAEGMAISFADEDGAFYIEP EEECHHHCCEEEECHHHHHCCCCCCCHHHHHHHHCCHHHCCCCCCEEEEECCCCCEEECC IEDFIKQKIPTEWAEDDMFVHDYKRTKPRPRTELPHGRGGKPGDRGRSGDKGRPAGRGRS HHHHHHHHCCCCCCCCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GSGSSKPAAGEKKVAAEKPATETVATAGEGTEAAKRKRPRRRKPKKAAEGTESNQPSQPD CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHCCCCCCCCCHHHCCCCCCCCCCCC QP CC >Mature Secondary Structure MKFTELQIPAEVQKGIDETGFTQCTPIQEKALPLALTGKDVAGQAQTGTGKTATFLISIF CCCCCCCCCHHHHCCCCCCCCCCCCCHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHH TKLLSQAKTGGEHHPRALILAPTRELVVQIEKDAQALGKYTGFNIQAIYGGVDYMKQRDA HHHHHHHHCCCCCCCCEEEEECCHHHHEEEHHHHHHHHHHCCCEEEEEECCHHHHHHHHH LKAGADIVIGTPGRLIDYLKQKVYSVKDVEALVIDEADRMFDMGFIADLRFILRRLPPYD HHCCCCEEEECCHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHCCCCC KRQNLLFSATLNTRVMELAYEFMNMPEKVSVTPEQMTAERVEQVLYHVSRKEKFPLLLGL CCCCEEEEEHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH LRKMGMERTMIFVNTKREAEYLQDRLNANEFPGKVISGDVEQRKRMKILADFKDGTLPIM HHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCEEEE IATDVASRGIHIEGVSHVINYDLPQDCEDYVHRIGRTARAGAEGMAISFADEDGAFYIEP EEECHHHCCEEEECHHHHHCCCCCCCHHHHHHHHCCHHHCCCCCCEEEEECCCCCEEECC IEDFIKQKIPTEWAEDDMFVHDYKRTKPRPRTELPHGRGGKPGDRGRSGDKGRPAGRGRS HHHHHHHHCCCCCCCCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GSGSSKPAAGEKKVAAEKPATETVATAGEGTEAAKRKRPRRRKPKKAAEGTESNQPSQPD CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHCCCCCCCCCHHHCCCCCCCCCCCC QP CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA