| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197119133
Identifier: 197119133
GI number: 197119133
Start: 3190128
End: 3190511
Strand: Reverse
Name: 197119133
Synonym: Gbem_2760
Alternate gene names: NA
Gene position: 3190511-3190128 (Counterclockwise)
Preceding gene: 197119134
Following gene: 197119132
Centisome position: 69.13
GC content: 57.03
Gene sequence:
>384_bases ATGAATATCGAAAAGTTTCACAAGAAGGATGTCGCCTACAGGCAACTGCAGACCGCGCTCAAGCTTTTCTTTGCCGGCGC TGACCTCTTCAGCGTCATCACGCTGGCTGCGGCCGCAGAGGAGATACTGGGCGAACTGCTGCGCCAAAAGAAAGGGGAGG AGAGAAGAGGGTTCCAGTCGGTGATGCACCTTTTCACCAGCCCCAAAACAGAGCCCGTTTCGTCCGGCACCTTGAATGAA AGCGAAATCTACCTGCACCTGGACCTGCGTCAGGAGGCTCTATTTCTATTGGGGCGCAGCGTGGACGACTACCTCGCGCT GGAGGGGAGTGCGACGGAAGAGATGCTCCGCTTCGATCGGGAGTTTCGTGCGGGAAAGGGGTAG
Upstream 100 bases:
>100_bases TCACAGTTCGCCGGCATCATTAAAAAGGCCGCGCTCCCGACAAGGAGCGCGGCCTTTTTTTATCCAGAGTAGCTGCGAAC CCCGAAACCGGAGCCTGAGC
Downstream 100 bases:
>100_bases GGTTCCATGGTCGGTGACAAGAGCCCATGCTTGCACAGGTTGATTCTCCCTATATATTTGTGTGGTAAATTTAATGTGAC CTTGAATTCAACCGTAAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MNIEKFHKKDVAYRQLQTALKLFFAGADLFSVITLAAAAEEILGELLRQKKGEERRGFQSVMHLFTSPKTEPVSSGTLNE SEIYLHLDLRQEALFLLGRSVDDYLALEGSATEEMLRFDREFRAGKG
Sequences:
>Translated_127_residues MNIEKFHKKDVAYRQLQTALKLFFAGADLFSVITLAAAAEEILGELLRQKKGEERRGFQSVMHLFTSPKTEPVSSGTLNE SEIYLHLDLRQEALFLLGRSVDDYLALEGSATEEMLRFDREFRAGKG >Mature_127_residues MNIEKFHKKDVAYRQLQTALKLFFAGADLFSVITLAAAAEEILGELLRQKKGEERRGFQSVMHLFTSPKTEPVSSGTLNE SEIYLHLDLRQEALFLLGRSVDDYLALEGSATEEMLRFDREFRAGKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14398; Mature: 14398
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIEKFHKKDVAYRQLQTALKLFFAGADLFSVITLAAAAEEILGELLRQKKGEERRGFQS CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH VMHLFTSPKTEPVSSGTLNESEIYLHLDLRQEALFLLGRSVDDYLALEGSATEEMLRFDR HHHHHHCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHH EFRAGKG HHCCCCC >Mature Secondary Structure MNIEKFHKKDVAYRQLQTALKLFFAGADLFSVITLAAAAEEILGELLRQKKGEERRGFQS CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH VMHLFTSPKTEPVSSGTLNESEIYLHLDLRQEALFLLGRSVDDYLALEGSATEEMLRFDR HHHHHHCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHH EFRAGKG HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA