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The map label for this gene is omcS-3

Identifier: 197119055

GI number: 197119055

Start: 3103888

End: 3105297

Strand: Reverse

Name: omcS-3

Synonym: Gbem_2680

Alternate gene names: NA

Gene position: 3105297-3103888 (Counterclockwise)

Preceding gene: 308535314

Following gene: 197119054

Centisome position: 67.28

GC content: 57.09

Gene sequence:

>1410_bases
ATGTTTTGCACACCATTCGCACTCTACCATTCCGCAATCAAAACTGGCGGGTGGATTACTGGGTTCACTAAAGGCGGGAT
ACAGTTGAAGATCATAATTAACGTAGTTTTGGCTTTTGCATTCGTGCTTATTTCCGTACCGGCATTTGCTTTTCATTCTG
GCGGTGTCGCCGAGTGCGAAGGTTGCCACTCCATGCACAACTCGTTTGAAGGTGCCGCCAATGTGACCGGTATGAGCCAG
TATAAGTCCGGCCCGTACCTCCTGAAAGCTCAGGACCAGTCCGGTGCTTGCCTCAACTGCCACCAGGCTGGCGACACCAC
CCCCGGCCCCGTTACCGGTAAGGACAATGGCTACCACATCTCCACCGCAGGTGTTACTGCATATGACAGCACCACCCCCG
TTGAATTAACCCCTGGCGGAGACTTCGCATGGCTCAAAAAGACTATGACTTTTTATTTGTGGCATGACCCATCAGTCTCC
ACTGAAGGTGATCGTCACGGCCACAACATCATCGCGGTAGACTTTGGCTACACCCAGGACATGGTCCTGACCGCTGCCCC
TGGTGGCACCTACCCGGCAGCCAACCTGGCCTGCTCCTCCTGCCACGATCCCCATGGCAAGTACCGTCGTCTTGCCGACG
GCACCAAGGCCACCACAGGTCTGCCGATTTTCAACTCCGGTTCCTACATCAACAGCAAAGATCCGATCACCGGTGTTTCC
GCCGTCGGCGTGTACCGCCTCCTCGCAGGTGTAGGCTACCAGCCGAAGTCCCTTACCGGCTCCTACGCCTTCGCGAACCC
ATCTCCGGACGCACTTGCTCCGAGCAGCTACAACGGACTCAACGATACCATCGCAGGCGGTAAAGACCGAGTTGCTTACG
GCCAGGGTATGTCCGAGTGGTGTGCTAACTGCCACACCGCAATGCACAAGGACAACTACACCTCCGGCACTAAAGGGCTG
GTTCACCCTGCAGGTAACGGTGCCAAGCTGACCGCCGCCATTGCCGGCAACTACAAATCCTATGTTTCTTCCGGCATCGC
CGGCACCCCCGCATCAGGTGGCTATAGCTCCCTGGCTCCGTTTGAACTCGGTTCTGGTGACTATGCCGCCATCAAAACCT
TTCAGGCTAGTCCGGGTGGCGTCAGCACCTCCAGCAACGTGCTCTGCCTCTCCTGCCACCGTGCTCACGCTTCCGCCTTC
GAAAGCATGACCCGCTACTACCTGGGCAACGAGTTCATGACGGTCGCTGATGCATCCAACGCCGCCGCTTACGACTCCAG
CACCACCGAGAACAAGATCAACACCGGCTACAGCGTCACTCAGCAGCAGAACGCCTACAACGGCCGTCCGGCATCTCTTT
TCGGACCGTACGCACGTGACTACTGCAACAAGTGCCACGCCAAAGACTAG

Upstream 100 bases:

>100_bases
AATTAGTTAGCTAAATCACATTACATTATGGTTATATGGCGTGGTAAGTGTTCCGTCTTTTAAAAGTATCTTGGAAAATC
GGTTAATTAAGATAAGGTAC

Downstream 100 bases:

>100_bases
TTTTTAGTGGGCACTTGAAACACACCTTTGGACAGTGGGGCGTGTTGTGGCGTGAAGTCGGTATATATAAACGCACAAGA
TGTTAGCGGCTTACTCGCCG

Product: cytochrome c

Products: NA

Alternate protein names: Cytochrome C

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MFCTPFALYHSAIKTGGWITGFTKGGIQLKIIINVVLAFAFVLISVPAFAFHSGGVAECEGCHSMHNSFEGAANVTGMSQ
YKSGPYLLKAQDQSGACLNCHQAGDTTPGPVTGKDNGYHISTAGVTAYDSTTPVELTPGGDFAWLKKTMTFYLWHDPSVS
TEGDRHGHNIIAVDFGYTQDMVLTAAPGGTYPAANLACSSCHDPHGKYRRLADGTKATTGLPIFNSGSYINSKDPITGVS
AVGVYRLLAGVGYQPKSLTGSYAFANPSPDALAPSSYNGLNDTIAGGKDRVAYGQGMSEWCANCHTAMHKDNYTSGTKGL
VHPAGNGAKLTAAIAGNYKSYVSSGIAGTPASGGYSSLAPFELGSGDYAAIKTFQASPGGVSTSSNVLCLSCHRAHASAF
ESMTRYYLGNEFMTVADASNAAAYDSSTTENKINTGYSVTQQQNAYNGRPASLFGPYARDYCNKCHAKD

Sequences:

>Translated_469_residues
MFCTPFALYHSAIKTGGWITGFTKGGIQLKIIINVVLAFAFVLISVPAFAFHSGGVAECEGCHSMHNSFEGAANVTGMSQ
YKSGPYLLKAQDQSGACLNCHQAGDTTPGPVTGKDNGYHISTAGVTAYDSTTPVELTPGGDFAWLKKTMTFYLWHDPSVS
TEGDRHGHNIIAVDFGYTQDMVLTAAPGGTYPAANLACSSCHDPHGKYRRLADGTKATTGLPIFNSGSYINSKDPITGVS
AVGVYRLLAGVGYQPKSLTGSYAFANPSPDALAPSSYNGLNDTIAGGKDRVAYGQGMSEWCANCHTAMHKDNYTSGTKGL
VHPAGNGAKLTAAIAGNYKSYVSSGIAGTPASGGYSSLAPFELGSGDYAAIKTFQASPGGVSTSSNVLCLSCHRAHASAF
ESMTRYYLGNEFMTVADASNAAAYDSSTTENKINTGYSVTQQQNAYNGRPASLFGPYARDYCNKCHAKD
>Mature_469_residues
MFCTPFALYHSAIKTGGWITGFTKGGIQLKIIINVVLAFAFVLISVPAFAFHSGGVAECEGCHSMHNSFEGAANVTGMSQ
YKSGPYLLKAQDQSGACLNCHQAGDTTPGPVTGKDNGYHISTAGVTAYDSTTPVELTPGGDFAWLKKTMTFYLWHDPSVS
TEGDRHGHNIIAVDFGYTQDMVLTAAPGGTYPAANLACSSCHDPHGKYRRLADGTKATTGLPIFNSGSYINSKDPITGVS
AVGVYRLLAGVGYQPKSLTGSYAFANPSPDALAPSSYNGLNDTIAGGKDRVAYGQGMSEWCANCHTAMHKDNYTSGTKGL
VHPAGNGAKLTAAIAGNYKSYVSSGIAGTPASGGYSSLAPFELGSGDYAAIKTFQASPGGVSTSSNVLCLSCHRAHASAF
ESMTRYYLGNEFMTVADASNAAAYDSSTTENKINTGYSVTQQQNAYNGRPASLFGPYARDYCNKCHAKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49150; Mature: 49150

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFCTPFALYHSAIKTGGWITGFTKGGIQLKIIINVVLAFAFVLISVPAFAFHSGGVAECE
CCCCHHHHHHHHHHCCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
GCHSMHNSFEGAANVTGMSQYKSGPYLLKAQDQSGACLNCHQAGDTTPGPVTGKDNGYHI
HHHHHHHCCCCCCCCCCHHHHCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCEEE
STAGVTAYDSTTPVELTPGGDFAWLKKTMTFYLWHDPSVSTEGDRHGHNIIAVDFGYTQD
EECCEEEECCCCCEEECCCCCHHHEEEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCC
MVLTAAPGGTYPAANLACSSCHDPHGKYRRLADGTKATTGLPIFNSGSYINSKDPITGVS
EEEEECCCCCCCHHHHHHHCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCHH
AVGVYRLLAGVGYQPKSLTGSYAFANPSPDALAPSSYNGLNDTIAGGKDRVAYGQGMSEW
HHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCHHHH
CANCHTAMHKDNYTSGTKGLVHPAGNGAKLTAAIAGNYKSYVSSGIAGTPASGGYSSLAP
HHHHHHHHCCCCCCCCCCCEEEECCCCCEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCC
FELGSGDYAAIKTFQASPGGVSTSSNVLCLSCHRAHASAFESMTRYYLGNEFMTVADASN
EECCCCCEEEEEEEECCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCEEEEECCCC
AAAYDSSTTENKINTGYSVTQQQNAYNGRPASLFGPYARDYCNKCHAKD
CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MFCTPFALYHSAIKTGGWITGFTKGGIQLKIIINVVLAFAFVLISVPAFAFHSGGVAECE
CCCCHHHHHHHHHHCCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
GCHSMHNSFEGAANVTGMSQYKSGPYLLKAQDQSGACLNCHQAGDTTPGPVTGKDNGYHI
HHHHHHHCCCCCCCCCCHHHHCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCEEE
STAGVTAYDSTTPVELTPGGDFAWLKKTMTFYLWHDPSVSTEGDRHGHNIIAVDFGYTQD
EECCEEEECCCCCEEECCCCCHHHEEEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCC
MVLTAAPGGTYPAANLACSSCHDPHGKYRRLADGTKATTGLPIFNSGSYINSKDPITGVS
EEEEECCCCCCCHHHHHHHCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCHH
AVGVYRLLAGVGYQPKSLTGSYAFANPSPDALAPSSYNGLNDTIAGGKDRVAYGQGMSEW
HHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCHHHH
CANCHTAMHKDNYTSGTKGLVHPAGNGAKLTAAIAGNYKSYVSSGIAGTPASGGYSSLAP
HHHHHHHHCCCCCCCCCCCEEEECCCCCEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCC
FELGSGDYAAIKTFQASPGGVSTSSNVLCLSCHRAHASAFESMTRYYLGNEFMTVADASN
EECCCCCEEEEEEEECCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCEEEEECCCC
AAAYDSSTTENKINTGYSVTQQQNAYNGRPASLFGPYARDYCNKCHAKD
CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA