| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is glmM
Identifier: 197119012
GI number: 197119012
Start: 3050476
End: 3051840
Strand: Reverse
Name: glmM
Synonym: Gbem_2635
Alternate gene names: 197119012
Gene position: 3051840-3050476 (Counterclockwise)
Preceding gene: 197119013
Following gene: 197119011
Centisome position: 66.13
GC content: 61.98
Gene sequence:
>1365_bases ATGAAGAAGCTTTTCGGAACGGACGGGGTGCGCGGTGTGGCCAACGTCTATCCGATGACTGCAGAAATGGCAATGCAGAT CGGCCGCGCGGCCGCCTACATCTTCAAAAACGGCAAGAAACGCCACCGTATCGTGATCGGCAAGGACACGCGCCTCTCCG GCTACATGCTTGAAAGCGCGCTCATGGCCGGCATCTGCTCTATGGGCGTGGACGTGCTCCTGGTAGGGCCGCTGCCTACC CCCGGCATCGCCAACATCACCTCCTCCATGCGCGCCGACGCAGGCGTCGTGATCTCCGCTTCCCACAACCCCTTCGAGGA CAATGGGATCAAGTTCTTCTCGCGCGACGGCTTCAAGCTTCCCGACGAGACCGAGCTGATGATGGAGGAGCTGATCTTCT CCAAGCGGATCGATTCCTTGCGCCCGACCGCCAAGGAAGTGGGGAAGGCGTACCGCATCGACGACGCCCAGGGGCGCTTC GTCGTCTTCCTGAAGAGCACCTTCCCCAAGGATCTAGATCTCTCCGGGCTTAAGATCGTCCTCGACTGCGCCAACGGCGC CGCCTACAAGGTCGCACCCGCCGTCTTCGAGGAACTGGGCGCGGAGGTCATCTCCATCGGCGTCAAGCCAAACGGCACCA ACATCAACGCCGACTGCGGATCGCTGCATCCCGAGGTGATGAGCCAGGCGGTGAAGGAACACGGCGCCGACTTGGGCGTT GCGCTCGACGGCGACGCCGACCGGGTCATTTTCGTGGACGAGTACGGCAACGTGGTCGACGGCGACCGCATCATGGCGAT CTGCGCGACCGAAATGATCCGGCAAGGGATCCTGAAGCAGAACACGCTGGTGGCGACAGTGATGAGCAACATGGGACTCG ACATAGCCATGAAACGCGCCGGCGGCCAGGTCATCAAGACCGCGGTCGGGGACCGTTACGTTGTGGAGGAGATGCTCAAG GGGGGCTACAACCTCGGGGGCGAGCAGTCCGGCCACATGATCTTCCTCGACCACAACACCACCGGCGACGGCGTCCTTTC GGCGCTGCAGGTGCTCGCCATCATGCAGCGTCACCAAAAGCGTCTATCCGAGCTCGCCCTGGTCATGGAACCGCTGCCGC AGGTGCTCGTCAACGTCCGCCTGGCTGAGAAATCGGACATCATGCAGGTCCCCGAGATAGCGAAGTTGATCAACGACGTC GAGGAAAAGCTCAAGGGCGAGGGAAGGGTCCTCATCCGCTACTCCGGCACGGAGCCGCTTTTGCGCATCATGCTGGAAGG AAGCGACGAGGGGGATATTCGCTGCTGGGCCAACGACATAGCTTCCATCGTGGCACAGAAGCTGGGAGGTGAGGCGCGTG GCTAG
Upstream 100 bases:
>100_bases GATGACCTGGGAAAAGTGGGGAGAGCAGCACCCAATTGGTGGCGGAAAACGCTGCCTGATCAGCAGGTAAATAACTAAAA TTCATCGCATGAGGTGATCT
Downstream 100 bases:
>100_bases ACTGGGAGTGAACATAGATCACGTGGCGACGCTTCGGCAGGCGAGGGGGGGGACGGAACCGGACCCGGTCGCAGCCGCCG CCATCGCCGAATTCGCCGGT
Product: phosphoglucosamine mutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 454; Mature: 454
Protein sequence:
>454_residues MKKLFGTDGVRGVANVYPMTAEMAMQIGRAAAYIFKNGKKRHRIVIGKDTRLSGYMLESALMAGICSMGVDVLLVGPLPT PGIANITSSMRADAGVVISASHNPFEDNGIKFFSRDGFKLPDETELMMEELIFSKRIDSLRPTAKEVGKAYRIDDAQGRF VVFLKSTFPKDLDLSGLKIVLDCANGAAYKVAPAVFEELGAEVISIGVKPNGTNINADCGSLHPEVMSQAVKEHGADLGV ALDGDADRVIFVDEYGNVVDGDRIMAICATEMIRQGILKQNTLVATVMSNMGLDIAMKRAGGQVIKTAVGDRYVVEEMLK GGYNLGGEQSGHMIFLDHNTTGDGVLSALQVLAIMQRHQKRLSELALVMEPLPQVLVNVRLAEKSDIMQVPEIAKLINDV EEKLKGEGRVLIRYSGTEPLLRIMLEGSDEGDIRCWANDIASIVAQKLGGEARG
Sequences:
>Translated_454_residues MKKLFGTDGVRGVANVYPMTAEMAMQIGRAAAYIFKNGKKRHRIVIGKDTRLSGYMLESALMAGICSMGVDVLLVGPLPT PGIANITSSMRADAGVVISASHNPFEDNGIKFFSRDGFKLPDETELMMEELIFSKRIDSLRPTAKEVGKAYRIDDAQGRF VVFLKSTFPKDLDLSGLKIVLDCANGAAYKVAPAVFEELGAEVISIGVKPNGTNINADCGSLHPEVMSQAVKEHGADLGV ALDGDADRVIFVDEYGNVVDGDRIMAICATEMIRQGILKQNTLVATVMSNMGLDIAMKRAGGQVIKTAVGDRYVVEEMLK GGYNLGGEQSGHMIFLDHNTTGDGVLSALQVLAIMQRHQKRLSELALVMEPLPQVLVNVRLAEKSDIMQVPEIAKLINDV EEKLKGEGRVLIRYSGTEPLLRIMLEGSDEGDIRCWANDIASIVAQKLGGEARG >Mature_454_residues MKKLFGTDGVRGVANVYPMTAEMAMQIGRAAAYIFKNGKKRHRIVIGKDTRLSGYMLESALMAGICSMGVDVLLVGPLPT PGIANITSSMRADAGVVISASHNPFEDNGIKFFSRDGFKLPDETELMMEELIFSKRIDSLRPTAKEVGKAYRIDDAQGRF VVFLKSTFPKDLDLSGLKIVLDCANGAAYKVAPAVFEELGAEVISIGVKPNGTNINADCGSLHPEVMSQAVKEHGADLGV ALDGDADRVIFVDEYGNVVDGDRIMAICATEMIRQGILKQNTLVATVMSNMGLDIAMKRAGGQVIKTAVGDRYVVEEMLK GGYNLGGEQSGHMIFLDHNTTGDGVLSALQVLAIMQRHQKRLSELALVMEPLPQVLVNVRLAEKSDIMQVPEIAKLINDV EEKLKGEGRVLIRYSGTEPLLRIMLEGSDEGDIRCWANDIASIVAQKLGGEARG
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family
Homologues:
Organism=Escherichia coli, GI1789566, Length=444, Percent_Identity=50.9009009009009, Blast_Score=411, Evalue=1e-116, Organism=Escherichia coli, GI1788361, Length=445, Percent_Identity=28.7640449438202, Blast_Score=127, Evalue=1e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GLMM_GEOBB (B5EHA7)
Other databases:
- EMBL: CP001124 - RefSeq: YP_002139439.1 - ProteinModelPortal: B5EHA7 - SMR: B5EHA7 - GeneID: 6782632 - GenomeReviews: CP001124_GR - KEGG: gbm:Gbem_2635 - HOGENOM: HBG644964 - OMA: VHDRYIE - ProtClustDB: PRK14314 - HAMAP: MF_01554_B - InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 - InterPro: IPR006352 - Gene3D: G3DSA:3.40.120.10 - PRINTS: PR00509 - TIGRFAMs: TIGR01455
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV; SSF53738 A-D-PHexomutase_a/b/a-I/II/III
EC number: =5.4.2.10
Molecular weight: Translated: 49086; Mature: 49086
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: PS00710 PGM_PMM
Important sites: ACT_SITE 101-101
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLFGTDGVRGVANVYPMTAEMAMQIGRAAAYIFKNGKKRHRIVIGKDTRLSGYMLESA CCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHH LMAGICSMGVDVLLVGPLPTPGIANITSSMRADAGVVISASHNPFEDNGIKFFSRDGFKL HHHHHHHCCCCEEEECCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEECCCCCC PDETELMMEELIFSKRIDSLRPTAKEVGKAYRIDDAQGRFVVFLKSTFPKDLDLSGLKIV CCHHHHHHHHHHHHHHHHHCCCCHHHHCCEEECCCCCCCEEEEEECCCCCCCCCCCCEEE LDCANGAAYKVAPAVFEELGAEVISIGVKPNGTNINADCGSLHPEVMSQAVKEHGADLGV EECCCCCCEEHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEE ALDGDADRVIFVDEYGNVVDGDRIMAICATEMIRQGILKQNTLVATVMSNMGLDIAMKRA EECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEHHC GGQVIKTAVGDRYVVEEMLKGGYNLGGEQSGHMIFLDHNTTGDGVLSALQVLAIMQRHQK CCCEEHHHHCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH RLSELALVMEPLPQVLVNVRLAEKSDIMQVPEIAKLINDVEEKLKGEGRVLIRYSGTEPL HHHHHHHHHHHHHHHHHEEHCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCE LRIMLEGSDEGDIRCWANDIASIVAQKLGGEARG EHHEECCCCCCCEEEHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKKLFGTDGVRGVANVYPMTAEMAMQIGRAAAYIFKNGKKRHRIVIGKDTRLSGYMLESA CCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHH LMAGICSMGVDVLLVGPLPTPGIANITSSMRADAGVVISASHNPFEDNGIKFFSRDGFKL HHHHHHHCCCCEEEECCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEECCCCCC PDETELMMEELIFSKRIDSLRPTAKEVGKAYRIDDAQGRFVVFLKSTFPKDLDLSGLKIV CCHHHHHHHHHHHHHHHHHCCCCHHHHCCEEECCCCCCCEEEEEECCCCCCCCCCCCEEE LDCANGAAYKVAPAVFEELGAEVISIGVKPNGTNINADCGSLHPEVMSQAVKEHGADLGV EECCCCCCEEHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEE ALDGDADRVIFVDEYGNVVDGDRIMAICATEMIRQGILKQNTLVATVMSNMGLDIAMKRA EECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEHHC GGQVIKTAVGDRYVVEEMLKGGYNLGGEQSGHMIFLDHNTTGDGVLSALQVLAIMQRHQK CCCEEHHHHCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH RLSELALVMEPLPQVLVNVRLAEKSDIMQVPEIAKLINDVEEKLKGEGRVLIRYSGTEPL HHHHHHHHHHHHHHHHHEEHCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCE LRIMLEGSDEGDIRCWANDIASIVAQKLGGEARG EHHEECCCCCCCEEEHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA