| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is modB-2 [H]
Identifier: 197118989
GI number: 197118989
Start: 3029687
End: 3030370
Strand: Reverse
Name: modB-2 [H]
Synonym: Gbem_2612
Alternate gene names: 197118989
Gene position: 3030370-3029687 (Counterclockwise)
Preceding gene: 197118990
Following gene: 197118988
Centisome position: 65.66
GC content: 54.68
Gene sequence:
>684_bases ATGCTCGCGCTGACAAGCACAGATTACGATGCCATACGGCTCTCCATAAAGGTGGCTGCGGCGGCTATGGCCGTATCGCT TCCCTTTGGGGTTGCCTTTGCCTACCTGCTTACCTTTCGCGATTTCAAGGGGAAAGTGTTGCTTGAAGTGGTGGTTAACC TGCCGTTAACGCTGCCTCCTGTGGTAATAGGCTATTTACTTCTTCTGCTGCTGGGCAAGAACGGGTGGCTCGGTTCGCTA CTGGATGCAGCCGGGATCCGGCTCATCTTCACCTGGAAGGCTGCGGTTATTGCATCTGCTTGTGTCGGGTTCCCTCTGTT GGTCAGGTCCATCAGGATCGGGATGGAGTCAATTGACATTCAACTGATTCAGGCGTCGCGAACTCTAGGCGCCACGTGGC ATGACACCCTAGTTACCGTAATTCTGCCGCTTTCTTTGCACGGGATCATAGCCGGTTCGTCCCTCATGTTTGCCCGCAGT CTTGGAGAATTCGGCGCGACTATCATTGTGGCCGGCAATATTCCCGGCGTCACCCAGACCATCCCGCTGGCCATCTACGA CTATGCCAGTTCCCCCACAAGCGAAGATCTTGCACTGTCGCTTTGTGCCGTGTCCATCGCCATTTCAGTGCTAGTTCTCT TCTCCCATGAAGTATTCGGCAAGAAGCTGGCAAGGAGGAGGTGA
Upstream 100 bases:
>100_bases CAAAGTGCGGAGGCCAAAGTCGTTTTGAGAAGATACGGCTTTGTGAAATAACGCTGGCTGCCAACCAGACTTGAACTTGC TTTTTATCCTGGAGATGCAA
Downstream 100 bases:
>100_bases AATGGATATCAGGATTTCCGTAGAGAAACGGCTCGGAGACTTCTCTTTGCAGGCCGATGTGGCGATGGCAGGTGAGCGTA TAGGCATTTTCGGTCCGTCG
Product: molybdate ABC transporter membrane protein
Products: ADP; phosphate; MoO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MLALTSTDYDAIRLSIKVAAAAMAVSLPFGVAFAYLLTFRDFKGKVLLEVVVNLPLTLPPVVIGYLLLLLLGKNGWLGSL LDAAGIRLIFTWKAAVIASACVGFPLLVRSIRIGMESIDIQLIQASRTLGATWHDTLVTVILPLSLHGIIAGSSLMFARS LGEFGATIIVAGNIPGVTQTIPLAIYDYASSPTSEDLALSLCAVSIAISVLVLFSHEVFGKKLARRR
Sequences:
>Translated_227_residues MLALTSTDYDAIRLSIKVAAAAMAVSLPFGVAFAYLLTFRDFKGKVLLEVVVNLPLTLPPVVIGYLLLLLLGKNGWLGSL LDAAGIRLIFTWKAAVIASACVGFPLLVRSIRIGMESIDIQLIQASRTLGATWHDTLVTVILPLSLHGIIAGSSLMFARS LGEFGATIIVAGNIPGVTQTIPLAIYDYASSPTSEDLALSLCAVSIAISVLVLFSHEVFGKKLARRR >Mature_227_residues MLALTSTDYDAIRLSIKVAAAAMAVSLPFGVAFAYLLTFRDFKGKVLLEVVVNLPLTLPPVVIGYLLLLLLGKNGWLGSL LDAAGIRLIFTWKAAVIASACVGFPLLVRSIRIGMESIDIQLIQASRTLGATWHDTLVTVILPLSLHGIIAGSSLMFARS LGEFGATIIVAGNIPGVTQTIPLAIYDYASSPTSEDLALSLCAVSIAISVLVLFSHEVFGKKLARRR
Specific function: Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4149
COG function: function code P; ABC-type molybdate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786980, Length=225, Percent_Identity=48.8888888888889, Blast_Score=181, Evalue=4e-47, Organism=Escherichia coli, GI1788764, Length=158, Percent_Identity=37.3417721518987, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI87082099, Length=176, Percent_Identity=36.3636363636364, Blast_Score=100, Evalue=9e-23, Organism=Escherichia coli, GI1787369, Length=178, Percent_Identity=28.6516853932584, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011867 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24150; Mature: 24150
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLALTSTDYDAIRLSIKVAAAAMAVSLPFGVAFAYLLTFRDFKGKVLLEVVVNLPLTLPP CEEEECCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHH VVIGYLLLLLLGKNGWLGSLLDAAGIRLIFTWKAAVIASACVGFPLLVRSIRIGMESIDI HHHHHHHHHHHCCCCCHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCHHHHHE QLIQASRTLGATWHDTLVTVILPLSLHGIIAGSSLMFARSLGEFGATIIVAGNIPGVTQT EEEEECHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCCHH IPLAIYDYASSPTSEDLALSLCAVSIAISVLVLFSHEVFGKKLARRR HCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLALTSTDYDAIRLSIKVAAAAMAVSLPFGVAFAYLLTFRDFKGKVLLEVVVNLPLTLPP CEEEECCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHH VVIGYLLLLLLGKNGWLGSLLDAAGIRLIFTWKAAVIASACVGFPLLVRSIRIGMESIDI HHHHHHHHHHHCCCCCHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCHHHHHE QLIQASRTLGATWHDTLVTVILPLSLHGIIAGSSLMFARSLGEFGATIIVAGNIPGVTQT EEEEECHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCCHH IPLAIYDYASSPTSEDLALSLCAVSIAISVLVLFSHEVFGKKLARRR HCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; MoO42- [Periplasm]; H2O [C]
Specific reaction: ATP + MoO42- [Periplasm] + H2O = ADP + phosphate + MoO42- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]