| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
Click here to switch to the map view.
The map label for this gene is kdpC
Identifier: 197118983
GI number: 197118983
Start: 3022327
End: 3022899
Strand: Reverse
Name: kdpC
Synonym: Gbem_2606
Alternate gene names: 197118983
Gene position: 3022899-3022327 (Counterclockwise)
Preceding gene: 197118984
Following gene: 197118982
Centisome position: 65.5
GC content: 60.21
Gene sequence:
>573_bases ATGAAAGATATTCGATCAGCACTAGTCATGTTCATCCTGTTCACCATCATCTGCGGCGGGATCTATCCTTCCGTGGTAAC CGGCATTGCCAATGCGGTATTCCCTAAACAGGCACAGGGGAGCTTCGTCACTGGCAAGGACCATCGGGTGGTGGGTTCTT CATTGATAGGCCAGCCCTTCTCCGATGCGAAGTACTTCTGGCCCCGCCCCTCGGCCACGGTCGATTTCGGCTACAACTCC ATGGCATCGGGGGGATCCAACTCCGGTCCGACCAACCCTGAGTACCTCAAAACCGTTGCCGAGAGGGTCAAAACGCTGCA TGATGCAGGCGCCGCGGGATCCATCCCGACCGCTCTGGTCCAGGCCTCCGGCAGCGGCCTCGACCCCGACATCTCCCCTG AGGCGGCAAGGATTCAAGTGGCGCGTGTCGCAAAGGTACGCGGCATGACGGCTGAGCAGGTCGAAAGGATCCTGGCCGCC CACACCAGGGAGCGCCAACTTGGCTTTCTGGGCGAGCCGCGGGTGAACGTGCTTGAACTGAACCTGGCGCTGGATAACCG GGAGAATCGCTAG
Upstream 100 bases:
>100_bases TGGTAGCTCTATTTGCCTGAGCGGTTTTACCTCATGGGAAGGATGGGGGAGGGGGACGTTGCCCCACTGGTTGGCAAAGG AAATAAGTCCGGAGGACTTT
Downstream 100 bases:
>100_bases CGATGAGAGATGACGCTGCACGACCATCACCGGAAACGCTGCTCAAGGTGGCCAAGGCCGAGGAAGAGGCTCAGAGCGGG CGCGGCAAGCTGAAGATCTT
Product: potassium-transporting ATPase subunit C
Products: NA
Alternate protein names: ATP phosphohydrolase [potassium-transporting] C chain; Potassium-binding and translocating subunit C; Potassium-translocating ATPase C chain
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MKDIRSALVMFILFTIICGGIYPSVVTGIANAVFPKQAQGSFVTGKDHRVVGSSLIGQPFSDAKYFWPRPSATVDFGYNS MASGGSNSGPTNPEYLKTVAERVKTLHDAGAAGSIPTALVQASGSGLDPDISPEAARIQVARVAKVRGMTAEQVERILAA HTRERQLGFLGEPRVNVLELNLALDNRENR
Sequences:
>Translated_190_residues MKDIRSALVMFILFTIICGGIYPSVVTGIANAVFPKQAQGSFVTGKDHRVVGSSLIGQPFSDAKYFWPRPSATVDFGYNS MASGGSNSGPTNPEYLKTVAERVKTLHDAGAAGSIPTALVQASGSGLDPDISPEAARIQVARVAKVRGMTAEQVERILAA HTRERQLGFLGEPRVNVLELNLALDNRENR >Mature_190_residues MKDIRSALVMFILFTIICGGIYPSVVTGIANAVFPKQAQGSFVTGKDHRVVGSSLIGQPFSDAKYFWPRPSATVDFGYNS MASGGSNSGPTNPEYLKTVAERVKTLHDAGAAGSIPTALVQASGSGLDPDISPEAARIQVARVAKVRGMTAEQVERILAA HTRERQLGFLGEPRVNVLELNLALDNRENR
Specific function: One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex
COG id: COG2156
COG function: function code P; K+-transporting ATPase, c chain
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the kdpC family
Homologues:
Organism=Escherichia coli, GI1786913, Length=190, Percent_Identity=44.7368421052632, Blast_Score=150, Evalue=6e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ATKC_GEOBB (B5EH78)
Other databases:
- EMBL: CP001124 - RefSeq: YP_002139410.1 - GeneID: 6782603 - GenomeReviews: CP001124_GR - KEGG: gbm:Gbem_2606 - HOGENOM: HBG724180 - OMA: RYFWGRP - ProtClustDB: CLSK828854 - HAMAP: MF_00276 - InterPro: IPR003820 - PIRSF: PIRSF001296 - TIGRFAMs: TIGR00681
Pfam domain/function: PF02669 KdpC
EC number: =3.6.3.12
Molecular weight: Translated: 20313; Mature: 20313
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x2135993c)-;
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDIRSALVMFILFTIICGGIYPSVVTGIANAVFPKQAQGSFVTGKDHRVVGSSLIGQPF CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHCCCC SDAKYFWPRPSATVDFGYNSMASGGSNSGPTNPEYLKTVAERVKTLHDAGAAGSIPTALV CCCCEECCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHH QASGSGLDPDISPEAARIQVARVAKVRGMTAEQVERILAAHTRERQLGFLGEPRVNVLEL HCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE NLALDNRENR EEEECCCCCH >Mature Secondary Structure MKDIRSALVMFILFTIICGGIYPSVVTGIANAVFPKQAQGSFVTGKDHRVVGSSLIGQPF CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHCCCC SDAKYFWPRPSATVDFGYNSMASGGSNSGPTNPEYLKTVAERVKTLHDAGAAGSIPTALV CCCCEECCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHH QASGSGLDPDISPEAARIQVARVAKVRGMTAEQVERILAAHTRERQLGFLGEPRVNVLEL HCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE NLALDNRENR EEEECCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA