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The map label for this gene is noeA [H]

Identifier: 197118956

GI number: 197118956

Start: 2988677

End: 2990020

Strand: Reverse

Name: noeA [H]

Synonym: Gbem_2579

Alternate gene names: 197118956

Gene position: 2990020-2988677 (Counterclockwise)

Preceding gene: 197118957

Following gene: 197118955

Centisome position: 64.79

GC content: 54.32

Gene sequence:

>1344_bases
ATGTCGACGACCTCGCAGGATATTGAGTTTGCGCCGACGTCGGTAATGGACCGTGCTGGCAAGGTCTTCTTCCACGGCAA
CAGGGTATACCGGGCCATCCTTTCCCGCGAGGATGCCGAGATATACCGTGACCTGCTCCGGCGCGAGTGGATCAACGAGG
TTTTTTCCCAAGGGCTGGTCCGGACCTGGGTGTCTGACGACATGCTTTTGCCCGGCTCTTTCCTGACTCTCGAGCACGAG
CATATCCCCTTTGAAACCCACCCCGCGGAAAATACCTCCTACATGCACTGGCTGTCGGCGAAGACATTGGTAAGGGTCTG
CCTGGCCCTTTCTGAAAAAGGCTTCCTGCTCAAGGACGCACACCCCTGGAATGTGATGTTCAAGATGGGCTCACCGGTGA
TCATAGACTTCGGGTCGATCGTAAAAAGCGGTCGTGTCTCCCAAGGCTGGTTGGACGAATTCAGGAGGTATTTCGCGGCG
CCGGTGTGGCTTGCACACACGCGCTGGCACAGGTATGCCGCCGAGTACCGCAGACAGCATGGAGCTGGCTTCGCGATAAA
CGCTTTCGAGTCCCGCCTGCCGGCCAGGACGATCTTCCGTGGATTAAACCTGCTCAGCCGGTACCTTGATGCTCCCACAG
AATTCTTCTCTCGCCTGGACTGCTGGCTCGATAAGCACAAACCGGTCACCGTCGGAAAGGAAGTATGGGCCGATTACCAG
CAGTCTGGCGCCTCATCTGACCATCTCGCGCCCGACTCGCCCAAGCAGCTGTTTGTCCTTGACATTTTGAAGGGCGAACG
ACCGCTGAAAGTACTCGATTTCGCTGCCAACAAGGGGTACTATTCCGTTTTGGCAGCAAGGCTTGGAGCCTCTGTCGTTG
CCTGTGATTACGAACCTTATTGTGTCGATTACTGCCTGTCTCTGGCGCAGGAACAGAAACTCCCGATTACGCCGGCGCTA
CTTGATTTTTCAAGGCCCACTCCCTGCTATGGCATAGGGCTTTACGGCAGGAACTCCTATCAGCGTTTCAGATCGGACGT
CGTGCTGGCGCTTGGATTGGTCCACCATGTCTGCCTGAGACAACGAATTCCGGTTGAGGTTTTCTGCGACATCTGCCTGG
AATATGCAGACAAAGGAGTGATCCTGGAATATGTCGACGCCGCCGATAAGCATGTAGCGAGCTGGAATGTACCAATACCA
GCCGACTATTCGATAGAAGGACTGACAAAATTTTTCAGCAGGAAGTTTCCCGTTCTTGTCATGAGTCAGCCAATAACCAC
TGATGGATTGAACCGGGTCATGATGTACTTCGGTACAAGGAAGGAATATGATCTCTCTGCTTAA

Upstream 100 bases:

>100_bases
TCGTTGCTTCAGATTTTTTCAACACGGGCAGAACCTTCGACGAGGGAGACGCTGCTCTTTCAAAGTTTCTGGTGAGGCAT
GATTGGAGGGTAACTGGTTG

Downstream 100 bases:

>100_bases
ATCCTTATTGGGCAAGACCCTTTCGGTACCGCAACCTTGTAGCGCCGGCTGCACCCTTCGTAAGGAACTGGAAGACCAGC
GCCTGCTGCTAGGAAAACTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 447; Mature: 446

Protein sequence:

>447_residues
MSTTSQDIEFAPTSVMDRAGKVFFHGNRVYRAILSREDAEIYRDLLRREWINEVFSQGLVRTWVSDDMLLPGSFLTLEHE
HIPFETHPAENTSYMHWLSAKTLVRVCLALSEKGFLLKDAHPWNVMFKMGSPVIIDFGSIVKSGRVSQGWLDEFRRYFAA
PVWLAHTRWHRYAAEYRRQHGAGFAINAFESRLPARTIFRGLNLLSRYLDAPTEFFSRLDCWLDKHKPVTVGKEVWADYQ
QSGASSDHLAPDSPKQLFVLDILKGERPLKVLDFAANKGYYSVLAARLGASVVACDYEPYCVDYCLSLAQEQKLPITPAL
LDFSRPTPCYGIGLYGRNSYQRFRSDVVLALGLVHHVCLRQRIPVEVFCDICLEYADKGVILEYVDAADKHVASWNVPIP
ADYSIEGLTKFFSRKFPVLVMSQPITTDGLNRVMMYFGTRKEYDLSA

Sequences:

>Translated_447_residues
MSTTSQDIEFAPTSVMDRAGKVFFHGNRVYRAILSREDAEIYRDLLRREWINEVFSQGLVRTWVSDDMLLPGSFLTLEHE
HIPFETHPAENTSYMHWLSAKTLVRVCLALSEKGFLLKDAHPWNVMFKMGSPVIIDFGSIVKSGRVSQGWLDEFRRYFAA
PVWLAHTRWHRYAAEYRRQHGAGFAINAFESRLPARTIFRGLNLLSRYLDAPTEFFSRLDCWLDKHKPVTVGKEVWADYQ
QSGASSDHLAPDSPKQLFVLDILKGERPLKVLDFAANKGYYSVLAARLGASVVACDYEPYCVDYCLSLAQEQKLPITPAL
LDFSRPTPCYGIGLYGRNSYQRFRSDVVLALGLVHHVCLRQRIPVEVFCDICLEYADKGVILEYVDAADKHVASWNVPIP
ADYSIEGLTKFFSRKFPVLVMSQPITTDGLNRVMMYFGTRKEYDLSA
>Mature_446_residues
STTSQDIEFAPTSVMDRAGKVFFHGNRVYRAILSREDAEIYRDLLRREWINEVFSQGLVRTWVSDDMLLPGSFLTLEHEH
IPFETHPAENTSYMHWLSAKTLVRVCLALSEKGFLLKDAHPWNVMFKMGSPVIIDFGSIVKSGRVSQGWLDEFRRYFAAP
VWLAHTRWHRYAAEYRRQHGAGFAINAFESRLPARTIFRGLNLLSRYLDAPTEFFSRLDCWLDKHKPVTVGKEVWADYQQ
SGASSDHLAPDSPKQLFVLDILKGERPLKVLDFAANKGYYSVLAARLGASVVACDYEPYCVDYCLSLAQEQKLPITPALL
DFSRPTPCYGIGLYGRNSYQRFRSDVVLALGLVHHVCLRQRIPVEVFCDICLEYADKGVILEYVDAADKHVASWNVPIPA
DYSIEGLTKFFSRKFPVLVMSQPITTDGLNRVMMYFGTRKEYDLSA

Specific function: Not known; does not seem to participate in nod factor synthesis but required for nodulation on some specific Medicago species such as M.littoralis [H]

COG id: COG2264

COG function: function code J; Ribosomal protein L11 methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002877 [H]

Pfam domain/function: PF01728 FtsJ [H]

EC number: NA

Molecular weight: Translated: 51083; Mature: 50952

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTSQDIEFAPTSVMDRAGKVFFHGNRVYRAILSREDAEIYRDLLRREWINEVFSQGLV
CCCCCCCCCCCCHHHHHHCCCEEEECCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
RTWVSDDMLLPGSFLTLEHEHIPFETHPAENTSYMHWLSAKTLVRVCLALSEKGFLLKDA
HHHCCCCEECCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECC
HPWNVMFKMGSPVIIDFGSIVKSGRVSQGWLDEFRRYFAAPVWLAHTRWHRYAAEYRRQH
CCCEEEEECCCCEEEECHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHC
GAGFAINAFESRLPARTIFRGLNLLSRYLDAPTEFFSRLDCWLDKHKPVTVGKEVWADYQ
CCCEEEEHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
QSGASSDHLAPDSPKQLFVLDILKGERPLKVLDFAANKGYYSVLAARLGASVVACDYEPY
HCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEHHCCCCHHHHHHHHHCCEEEEECCCHH
CVDYCLSLAQEQKLPITPALLDFSRPTPCYGIGLYGRNSYQRFRSDVVLALGLVHHVCLR
HHHHHHHHHHCCCCCCCHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
QRIPVEVFCDICLEYADKGVILEYVDAADKHVASWNVPIPADYSIEGLTKFFSRKFPVLV
HCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCEEE
MSQPITTDGLNRVMMYFGTRKEYDLSA
EECCCCHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
STTSQDIEFAPTSVMDRAGKVFFHGNRVYRAILSREDAEIYRDLLRREWINEVFSQGLV
CCCCCCCCCCCHHHHHHCCCEEEECCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
RTWVSDDMLLPGSFLTLEHEHIPFETHPAENTSYMHWLSAKTLVRVCLALSEKGFLLKDA
HHHCCCCEECCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECC
HPWNVMFKMGSPVIIDFGSIVKSGRVSQGWLDEFRRYFAAPVWLAHTRWHRYAAEYRRQH
CCCEEEEECCCCEEEECHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHC
GAGFAINAFESRLPARTIFRGLNLLSRYLDAPTEFFSRLDCWLDKHKPVTVGKEVWADYQ
CCCEEEEHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
QSGASSDHLAPDSPKQLFVLDILKGERPLKVLDFAANKGYYSVLAARLGASVVACDYEPY
HCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEHHCCCCHHHHHHHHHCCEEEEECCCHH
CVDYCLSLAQEQKLPITPALLDFSRPTPCYGIGLYGRNSYQRFRSDVVLALGLVHHVCLR
HHHHHHHHHHCCCCCCCHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
QRIPVEVFCDICLEYADKGVILEYVDAADKHVASWNVPIPADYSIEGLTKFFSRKFPVLV
HCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCEEE
MSQPITTDGLNRVMMYFGTRKEYDLSA
EECCCCHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8801423; 11481432 [H]