Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is yqeM [H]

Identifier: 197118946

GI number: 197118946

Start: 2979765

End: 2980538

Strand: Reverse

Name: yqeM [H]

Synonym: Gbem_2569

Alternate gene names: 197118946

Gene position: 2980538-2979765 (Counterclockwise)

Preceding gene: 197118947

Following gene: 197118945

Centisome position: 64.58

GC content: 58.4

Gene sequence:

>774_bases
ATGAACTGCTTCGGTGCTTACTCCCACTATTACGACCTCCTTTACAAGGATAAGGATTACGCCGGCGAGGCGCGTTATAT
CGATGAGCTGATCCGCAAGCACTCCCCGGGCGCCAAGAGGATCCTCAACCTTGGATGCGGCACCGGCAGACACGACTTCG
AACTGATGAAGCTCGGGTACCAGGTCACCGGGCTTGACCTCTCTGAGGAAATGCTGGCAGTGGCAGCCAAGCGTCTTACG
GACATGCATCCTGGTCCCGCGCCGGCCGCGCTCCGTTTTCTTCAGGGAGATGTTCGCACGGTGCGACTGGGCGAAACCTT
TGACGTCGTTATCTCGCTTTTTCACGTCATGAGCTACCAGTCCACCAATGACGACCTGCACAAAGCCTTTGCCACTGCGA
AGGCGCATGTCGCTCCGGGGGGACTATTCCTCTTCGACTGCTGGTACGGCCCCGCTGTGCTCTCTGACCCTCCGGTGGTC
CGGGTGAAACGGCTCGAGGATGACGTCATCGAGGTTGTCCGCATCGCAGAGCCTGAAGTGCACTACAACGCCAATACCGT
GGACGTCAATTACCAGGTGCTGATAACGGAAAAGGCAACGGGAAGAGTATCTACTCTCAAGGAAACGCACACCATGCGCT
ATCTGTTCATGCCTGAGGTCGAAGGGCTATTTGCCGCACACGGCATGGAAATGACGGGGAGCGAGGAGTGGGGTACCGGC
AACGAGCCGGGAAGCGGGACTTGGGCGGTGCTTTTCGCCGGGGTCGTGGCGTGA

Upstream 100 bases:

>100_bases
CGGAACGCCTGGCTCGCCGCGGGTTCTATCTCCCAAGCGGCATGGCTTTGACTGAACCTGATATCGAAAAGGTGGCAAAG
GGAGTAAAAGAGGTGCTCGG

Downstream 100 bases:

>100_bases
AGGGATGAAGAGAATCGCGATTTTCCAGTACGAATGGCCGCTGCAAAGCCACACACTGAGCCTTGCTTCGGGGCTTGCCG
GCCACGACTTCGCCGTCGAT

Product: type 11 SAM-dependent methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MNCFGAYSHYYDLLYKDKDYAGEARYIDELIRKHSPGAKRILNLGCGTGRHDFELMKLGYQVTGLDLSEEMLAVAAKRLT
DMHPGPAPAALRFLQGDVRTVRLGETFDVVISLFHVMSYQSTNDDLHKAFATAKAHVAPGGLFLFDCWYGPAVLSDPPVV
RVKRLEDDVIEVVRIAEPEVHYNANTVDVNYQVLITEKATGRVSTLKETHTMRYLFMPEVEGLFAAHGMEMTGSEEWGTG
NEPGSGTWAVLFAGVVA

Sequences:

>Translated_257_residues
MNCFGAYSHYYDLLYKDKDYAGEARYIDELIRKHSPGAKRILNLGCGTGRHDFELMKLGYQVTGLDLSEEMLAVAAKRLT
DMHPGPAPAALRFLQGDVRTVRLGETFDVVISLFHVMSYQSTNDDLHKAFATAKAHVAPGGLFLFDCWYGPAVLSDPPVV
RVKRLEDDVIEVVRIAEPEVHYNANTVDVNYQVLITEKATGRVSTLKETHTMRYLFMPEVEGLFAAHGMEMTGSEEWGTG
NEPGSGTWAVLFAGVVA
>Mature_257_residues
MNCFGAYSHYYDLLYKDKDYAGEARYIDELIRKHSPGAKRILNLGCGTGRHDFELMKLGYQVTGLDLSEEMLAVAAKRLT
DMHPGPAPAALRFLQGDVRTVRLGETFDVVISLFHVMSYQSTNDDLHKAFATAKAHVAPGGLFLFDCWYGPAVLSDPPVV
RVKRLEDDVIEVVRIAEPEVHYNANTVDVNYQVLITEKATGRVSTLKETHTMRYLFMPEVEGLFAAHGMEMTGSEEWGTG
NEPGSGTWAVLFAGVVA

Specific function: May be a S-adenosyl-L-methionine (SAM)-dependent methyltransferase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 28508; Mature: 28508

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNCFGAYSHYYDLLYKDKDYAGEARYIDELIRKHSPGAKRILNLGCGTGRHDFELMKLGY
CCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHEECCCCCCCCCHHHHHCCC
QVTGLDLSEEMLAVAAKRLTDMHPGPAPAALRFLQGDVRTVRLGETFDVVISLFHVMSYQ
EEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCC
STNDDLHKAFATAKAHVAPGGLFLFDCWYGPAVLSDPPVVRVKRLEDDVIEVVRIAEPEV
CCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCE
HYNANTVDVNYQVLITEKATGRVSTLKETHTMRYLFMPEVEGLFAAHGMEMTGSEEWGTG
EECCEEEEEEEEEEEEECCCCCHHHHHHHHEEEEEECCCCCHHHHHCCCCCCCCCCCCCC
NEPGSGTWAVLFAGVVA
CCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MNCFGAYSHYYDLLYKDKDYAGEARYIDELIRKHSPGAKRILNLGCGTGRHDFELMKLGY
CCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHEECCCCCCCCCHHHHHCCC
QVTGLDLSEEMLAVAAKRLTDMHPGPAPAALRFLQGDVRTVRLGETFDVVISLFHVMSYQ
EEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCC
STNDDLHKAFATAKAHVAPGGLFLFDCWYGPAVLSDPPVVRVKRLEDDVIEVVRIAEPEV
CCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCE
HYNANTVDVNYQVLITEKATGRVSTLKETHTMRYLFMPEVEGLFAAHGMEMTGSEEWGTG
EECCEEEEEEEEEEEEECCCCCHHHHHHHHEEEEEECCCCCHHHHHCCCCCCCCCCCCCC
NEPGSGTWAVLFAGVVA
CCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377; 7968523 [H]