| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118937
Identifier: 197118937
GI number: 197118937
Start: 2971911
End: 2972417
Strand: Reverse
Name: 197118937
Synonym: Gbem_2560
Alternate gene names: NA
Gene position: 2972417-2971911 (Counterclockwise)
Preceding gene: 197118938
Following gene: 197118918
Centisome position: 64.41
GC content: 59.76
Gene sequence:
>507_bases ATGAAGAACACCCGCGTCTGCGTGAACGACCTGATGCAGAAGAACTACGTCTACTACCAGACCGAGCCCATGGGGGAGAA TTTCGACCCGGAATTCAAGCCGGAGCTGACCCCGCAAGAGATGCTGGAGATGGGGATCTTCGGCGGGAAGTATATGACCG ACTGCACCGGCGAGTTCCCCAAGGAGTGGTTCGCCAACGCGAGGCTCTGCCACGAGCGGCACGTGCCTGAGTACAACTTC TTCGGCGTCAACGCCTCGAAGCCGCTTTCCTACTGGCGTGAGAAGGGGTGGATCTACAGCGACGATCCGAGGGGATGGTT CCAGTGGTACTGCAGGTACTACATGGGGAGGAGATGCCCCGACGACAAGCGGCAGATCAAAAGGTGGAAGGCGATGGTGC GGCACATAGCGCAGATCAGGCATAACTGCCCGGAGGGGGTGCTGACCTGCCGCCGGAAACAGCGCCAGGCCCTGCTGCAT TGGGCCTACGACAGCAGGAAAATCTGA
Upstream 100 bases:
>100_bases CATCCCCTTCGGCATCTACCGCATCGCCGTCGGCATCGTCTTCCTGGTGTTCCTTACCTAGCCGACTTTAAGGGCGCCCA TCACCATAAGGAGTCGCTGC
Downstream 100 bases:
>100_bases CCCCGCCGCAGTTGAAACCTAGACTACTTTCCCTTCCTTGATGTACTCCCGCATTATCGCCGCCTCCAGGCGCGTCAGGT CCAGGCGGCGGGACTGGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MKNTRVCVNDLMQKNYVYYQTEPMGENFDPEFKPELTPQEMLEMGIFGGKYMTDCTGEFPKEWFANARLCHERHVPEYNF FGVNASKPLSYWREKGWIYSDDPRGWFQWYCRYYMGRRCPDDKRQIKRWKAMVRHIAQIRHNCPEGVLTCRRKQRQALLH WAYDSRKI
Sequences:
>Translated_168_residues MKNTRVCVNDLMQKNYVYYQTEPMGENFDPEFKPELTPQEMLEMGIFGGKYMTDCTGEFPKEWFANARLCHERHVPEYNF FGVNASKPLSYWREKGWIYSDDPRGWFQWYCRYYMGRRCPDDKRQIKRWKAMVRHIAQIRHNCPEGVLTCRRKQRQALLH WAYDSRKI >Mature_168_residues MKNTRVCVNDLMQKNYVYYQTEPMGENFDPEFKPELTPQEMLEMGIFGGKYMTDCTGEFPKEWFANARLCHERHVPEYNF FGVNASKPLSYWREKGWIYSDDPRGWFQWYCRYYMGRRCPDDKRQIKRWKAMVRHIAQIRHNCPEGVLTCRRKQRQALLH WAYDSRKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20469; Mature: 20469
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 8.9 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 8.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNTRVCVNDLMQKNYVYYQTEPMGENFDPEFKPELTPQEMLEMGIFGGKYMTDCTGEFP CCCCHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHCCCCCCCC KEWFANARLCHERHVPEYNFFGVNASKPLSYWREKGWIYSDDPRGWFQWYCRYYMGRRCP HHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHCCCEECCCCCHHHHHHHHHHHCCCCC DDKRQIKRWKAMVRHIAQIRHNCPEGVLTCRRKQRQALLHWAYDSRKI HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKNTRVCVNDLMQKNYVYYQTEPMGENFDPEFKPELTPQEMLEMGIFGGKYMTDCTGEFP CCCCHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHCCCCCCCC KEWFANARLCHERHVPEYNFFGVNASKPLSYWREKGWIYSDDPRGWFQWYCRYYMGRRCP HHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHCCCEECCCCCHHHHHHHHHHHCCCCC DDKRQIKRWKAMVRHIAQIRHNCPEGVLTCRRKQRQALLHWAYDSRKI HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA