| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118885
Identifier: 197118885
GI number: 197118885
Start: 2907804
End: 2908817
Strand: Reverse
Name: 197118885
Synonym: Gbem_2508
Alternate gene names: NA
Gene position: 2908817-2907804 (Counterclockwise)
Preceding gene: 197118886
Following gene: 197118884
Centisome position: 63.03
GC content: 63.81
Gene sequence:
>1014_bases ATGACCGACGCCATCATAGACGTCATCATACCCGTTTGGAACAGGCCCGACGAGACCCGGAACTGCCTGGTCACCCTGAT CAACCACACACCCGGCGCCCGATTCATCATGGTGGACTGCGGGTCCGAGCGGGATACCGAAAGGCTCCTGCAGGAACTTG CCGACAGCCTGGACGACCGCGCGTTGTTGATGCGCGATGACAGCAACATAGGTTTCGTGCCTGCTGCAAACCGCGGTTTC GAAAGCTCCGAAGCGCCGTACCTCGCTTTGGTGCGCAACACCAGCCTGGTGAGCGCGCGTTGGCTGGAGCCGCTATTGGC CTACGCCCAGGAGCATCCCGAGGCGGGGATTCTGCTTCCGTGTCTCGATCCGGGCGAGGAGTGCGATGTCCCGACCGAAC TGGAACGGGGCTCCTTCGGCGCCATGGTGATCAGCAGGGAACTCTATCGCCAGATCGGAGGTCTCGACGAGGGGATGGAC GGCGGCGTGTGGTGCCTCAAGGACTACACCCGGCGCGCCAACGCCAAGGGGTTTGTCACGGTGCAGGTGCCGACCCCGGT GGTGCACCACCAGGAAGAAGCCCGGCTCGGCTCCGAGCAAAGGCGGCGCGAAACGCAGCAGCGGAGCATCGCGCTGTTCA GGGAGCGCTGGGGCGTGGGAGGGAGCTACATCCTCCATGTACCCAAGGGGGTCGAAGTCGAGCTTTTGGGCGAAAAGCTG CAGTGGCTGGTAAAAGGGGCGCGGCGCGACGACAGCTACACCGTGCTCTTGCCGGCCTCCTTGAACCAGGCCGCCCAGCA GGCGGGATTCGGGAAGCTGCACGAGCACGTCACCTTGGTGCCGCTCCCGAGGCTTGCCTGGGACGGCATGAAAAAACGCC TCTTCGACAAGATCGCGTCCCAGAAACCGGGGACCACACCGGTCACCGCAGTGGATGGCATACCCTTCCCCTGGAGCGAG CGGTACCTGTCCTTCTCCGAGCTTTGCGAGAGGATCAAGGCCCGCTACCAGTAG
Upstream 100 bases:
>100_bases CGGCAAGGTCCTCGACGAGCTGGCGCTGCTTCGCAACGTCGCAGTCAGCTCCTAGGCGCCCTTTTCTTACACAACATGCT TGTCAGCCTGGGGGATTGTC
Downstream 100 bases:
>100_bases TCGCGGTCTCGCTGAGGCTTGTATATCCAATGCAGGAGGGTAGTGGATGCTTGTAGAGATAAAGGCCCAGCTTAAGGCCC ATTGCGAAGTCATGACGGCG
Product: glycosyltransferase
Products: NA
Alternate protein names: Glycosyl Transferase Family Protein; Glycosyl Transferase Group 2 Family; Glycosyltransferase
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MTDAIIDVIIPVWNRPDETRNCLVTLINHTPGARFIMVDCGSERDTERLLQELADSLDDRALLMRDDSNIGFVPAANRGF ESSEAPYLALVRNTSLVSARWLEPLLAYAQEHPEAGILLPCLDPGEECDVPTELERGSFGAMVISRELYRQIGGLDEGMD GGVWCLKDYTRRANAKGFVTVQVPTPVVHHQEEARLGSEQRRRETQQRSIALFRERWGVGGSYILHVPKGVEVELLGEKL QWLVKGARRDDSYTVLLPASLNQAAQQAGFGKLHEHVTLVPLPRLAWDGMKKRLFDKIASQKPGTTPVTAVDGIPFPWSE RYLSFSELCERIKARYQ
Sequences:
>Translated_337_residues MTDAIIDVIIPVWNRPDETRNCLVTLINHTPGARFIMVDCGSERDTERLLQELADSLDDRALLMRDDSNIGFVPAANRGF ESSEAPYLALVRNTSLVSARWLEPLLAYAQEHPEAGILLPCLDPGEECDVPTELERGSFGAMVISRELYRQIGGLDEGMD GGVWCLKDYTRRANAKGFVTVQVPTPVVHHQEEARLGSEQRRRETQQRSIALFRERWGVGGSYILHVPKGVEVELLGEKL QWLVKGARRDDSYTVLLPASLNQAAQQAGFGKLHEHVTLVPLPRLAWDGMKKRLFDKIASQKPGTTPVTAVDGIPFPWSE RYLSFSELCERIKARYQ >Mature_336_residues TDAIIDVIIPVWNRPDETRNCLVTLINHTPGARFIMVDCGSERDTERLLQELADSLDDRALLMRDDSNIGFVPAANRGFE SSEAPYLALVRNTSLVSARWLEPLLAYAQEHPEAGILLPCLDPGEECDVPTELERGSFGAMVISRELYRQIGGLDEGMDG GVWCLKDYTRRANAKGFVTVQVPTPVVHHQEEARLGSEQRRRETQQRSIALFRERWGVGGSYILHVPKGVEVELLGEKLQ WLVKGARRDDSYTVLLPASLNQAAQQAGFGKLHEHVTLVPLPRLAWDGMKKRLFDKIASQKPGTTPVTAVDGIPFPWSER YLSFSELCERIKARYQ
Specific function: Unknown
COG id: COG1216
COG function: function code R; Predicted glycosyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37834; Mature: 37702
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDAIIDVIIPVWNRPDETRNCLVTLINHTPGARFIMVDCGSERDTERLLQELADSLDDR CCCHHEEHHHHCCCCCCCHHHHHHHEECCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCC ALLMRDDSNIGFVPAANRGFESSEAPYLALVRNTSLVSARWLEPLLAYAQEHPEAGILLP EEEEECCCCEEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEE CLDPGEECDVPTELERGSFGAMVISRELYRQIGGLDEGMDGGVWCLKDYTRRANAKGFVT CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHCCCCCEEEE VQVPTPVVHHQEEARLGSEQRRRETQQRSIALFRERWGVGGSYILHVPKGVEVELLGEKL EEECCCHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHH QWLVKGARRDDSYTVLLPASLNQAAQQAGFGKLHEHVTLVPLPRLAWDGMKKRLFDKIAS HHHHHHCCCCCCEEEEEECHHHHHHHHCCCHHHHHCEEEEECCHHHHHHHHHHHHHHHHC QKPGTTPVTAVDGIPFPWSERYLSFSELCERIKARYQ CCCCCCCEEEECCCCCCHHHHHCCHHHHHHHHHHCCC >Mature Secondary Structure TDAIIDVIIPVWNRPDETRNCLVTLINHTPGARFIMVDCGSERDTERLLQELADSLDDR CCHHEEHHHHCCCCCCCHHHHHHHEECCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCC ALLMRDDSNIGFVPAANRGFESSEAPYLALVRNTSLVSARWLEPLLAYAQEHPEAGILLP EEEEECCCCEEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEE CLDPGEECDVPTELERGSFGAMVISRELYRQIGGLDEGMDGGVWCLKDYTRRANAKGFVT CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHCCCCCEEEE VQVPTPVVHHQEEARLGSEQRRRETQQRSIALFRERWGVGGSYILHVPKGVEVELLGEKL EEECCCHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHH QWLVKGARRDDSYTVLLPASLNQAAQQAGFGKLHEHVTLVPLPRLAWDGMKKRLFDKIAS HHHHHHCCCCCCEEEEEECHHHHHHHHCCCHHHHHCEEEEECCHHHHHHHHHHHHHHHHC QKPGTTPVTAVDGIPFPWSERYLSFSELCERIKARYQ CCCCCCCEEEECCCCCCHHHHHCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA