Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

Click here to switch to the map view.

The map label for this gene is 197118885

Identifier: 197118885

GI number: 197118885

Start: 2907804

End: 2908817

Strand: Reverse

Name: 197118885

Synonym: Gbem_2508

Alternate gene names: NA

Gene position: 2908817-2907804 (Counterclockwise)

Preceding gene: 197118886

Following gene: 197118884

Centisome position: 63.03

GC content: 63.81

Gene sequence:

>1014_bases
ATGACCGACGCCATCATAGACGTCATCATACCCGTTTGGAACAGGCCCGACGAGACCCGGAACTGCCTGGTCACCCTGAT
CAACCACACACCCGGCGCCCGATTCATCATGGTGGACTGCGGGTCCGAGCGGGATACCGAAAGGCTCCTGCAGGAACTTG
CCGACAGCCTGGACGACCGCGCGTTGTTGATGCGCGATGACAGCAACATAGGTTTCGTGCCTGCTGCAAACCGCGGTTTC
GAAAGCTCCGAAGCGCCGTACCTCGCTTTGGTGCGCAACACCAGCCTGGTGAGCGCGCGTTGGCTGGAGCCGCTATTGGC
CTACGCCCAGGAGCATCCCGAGGCGGGGATTCTGCTTCCGTGTCTCGATCCGGGCGAGGAGTGCGATGTCCCGACCGAAC
TGGAACGGGGCTCCTTCGGCGCCATGGTGATCAGCAGGGAACTCTATCGCCAGATCGGAGGTCTCGACGAGGGGATGGAC
GGCGGCGTGTGGTGCCTCAAGGACTACACCCGGCGCGCCAACGCCAAGGGGTTTGTCACGGTGCAGGTGCCGACCCCGGT
GGTGCACCACCAGGAAGAAGCCCGGCTCGGCTCCGAGCAAAGGCGGCGCGAAACGCAGCAGCGGAGCATCGCGCTGTTCA
GGGAGCGCTGGGGCGTGGGAGGGAGCTACATCCTCCATGTACCCAAGGGGGTCGAAGTCGAGCTTTTGGGCGAAAAGCTG
CAGTGGCTGGTAAAAGGGGCGCGGCGCGACGACAGCTACACCGTGCTCTTGCCGGCCTCCTTGAACCAGGCCGCCCAGCA
GGCGGGATTCGGGAAGCTGCACGAGCACGTCACCTTGGTGCCGCTCCCGAGGCTTGCCTGGGACGGCATGAAAAAACGCC
TCTTCGACAAGATCGCGTCCCAGAAACCGGGGACCACACCGGTCACCGCAGTGGATGGCATACCCTTCCCCTGGAGCGAG
CGGTACCTGTCCTTCTCCGAGCTTTGCGAGAGGATCAAGGCCCGCTACCAGTAG

Upstream 100 bases:

>100_bases
CGGCAAGGTCCTCGACGAGCTGGCGCTGCTTCGCAACGTCGCAGTCAGCTCCTAGGCGCCCTTTTCTTACACAACATGCT
TGTCAGCCTGGGGGATTGTC

Downstream 100 bases:

>100_bases
TCGCGGTCTCGCTGAGGCTTGTATATCCAATGCAGGAGGGTAGTGGATGCTTGTAGAGATAAAGGCCCAGCTTAAGGCCC
ATTGCGAAGTCATGACGGCG

Product: glycosyltransferase

Products: NA

Alternate protein names: Glycosyl Transferase Family Protein; Glycosyl Transferase Group 2 Family; Glycosyltransferase

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MTDAIIDVIIPVWNRPDETRNCLVTLINHTPGARFIMVDCGSERDTERLLQELADSLDDRALLMRDDSNIGFVPAANRGF
ESSEAPYLALVRNTSLVSARWLEPLLAYAQEHPEAGILLPCLDPGEECDVPTELERGSFGAMVISRELYRQIGGLDEGMD
GGVWCLKDYTRRANAKGFVTVQVPTPVVHHQEEARLGSEQRRRETQQRSIALFRERWGVGGSYILHVPKGVEVELLGEKL
QWLVKGARRDDSYTVLLPASLNQAAQQAGFGKLHEHVTLVPLPRLAWDGMKKRLFDKIASQKPGTTPVTAVDGIPFPWSE
RYLSFSELCERIKARYQ

Sequences:

>Translated_337_residues
MTDAIIDVIIPVWNRPDETRNCLVTLINHTPGARFIMVDCGSERDTERLLQELADSLDDRALLMRDDSNIGFVPAANRGF
ESSEAPYLALVRNTSLVSARWLEPLLAYAQEHPEAGILLPCLDPGEECDVPTELERGSFGAMVISRELYRQIGGLDEGMD
GGVWCLKDYTRRANAKGFVTVQVPTPVVHHQEEARLGSEQRRRETQQRSIALFRERWGVGGSYILHVPKGVEVELLGEKL
QWLVKGARRDDSYTVLLPASLNQAAQQAGFGKLHEHVTLVPLPRLAWDGMKKRLFDKIASQKPGTTPVTAVDGIPFPWSE
RYLSFSELCERIKARYQ
>Mature_336_residues
TDAIIDVIIPVWNRPDETRNCLVTLINHTPGARFIMVDCGSERDTERLLQELADSLDDRALLMRDDSNIGFVPAANRGFE
SSEAPYLALVRNTSLVSARWLEPLLAYAQEHPEAGILLPCLDPGEECDVPTELERGSFGAMVISRELYRQIGGLDEGMDG
GVWCLKDYTRRANAKGFVTVQVPTPVVHHQEEARLGSEQRRRETQQRSIALFRERWGVGGSYILHVPKGVEVELLGEKLQ
WLVKGARRDDSYTVLLPASLNQAAQQAGFGKLHEHVTLVPLPRLAWDGMKKRLFDKIASQKPGTTPVTAVDGIPFPWSER
YLSFSELCERIKARYQ

Specific function: Unknown

COG id: COG1216

COG function: function code R; Predicted glycosyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37834; Mature: 37702

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDAIIDVIIPVWNRPDETRNCLVTLINHTPGARFIMVDCGSERDTERLLQELADSLDDR
CCCHHEEHHHHCCCCCCCHHHHHHHEECCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCC
ALLMRDDSNIGFVPAANRGFESSEAPYLALVRNTSLVSARWLEPLLAYAQEHPEAGILLP
EEEEECCCCEEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEE
CLDPGEECDVPTELERGSFGAMVISRELYRQIGGLDEGMDGGVWCLKDYTRRANAKGFVT
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHCCCCCEEEE
VQVPTPVVHHQEEARLGSEQRRRETQQRSIALFRERWGVGGSYILHVPKGVEVELLGEKL
EEECCCHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHH
QWLVKGARRDDSYTVLLPASLNQAAQQAGFGKLHEHVTLVPLPRLAWDGMKKRLFDKIAS
HHHHHHCCCCCCEEEEEECHHHHHHHHCCCHHHHHCEEEEECCHHHHHHHHHHHHHHHHC
QKPGTTPVTAVDGIPFPWSERYLSFSELCERIKARYQ
CCCCCCCEEEECCCCCCHHHHHCCHHHHHHHHHHCCC
>Mature Secondary Structure 
TDAIIDVIIPVWNRPDETRNCLVTLINHTPGARFIMVDCGSERDTERLLQELADSLDDR
CCHHEEHHHHCCCCCCCHHHHHHHEECCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCC
ALLMRDDSNIGFVPAANRGFESSEAPYLALVRNTSLVSARWLEPLLAYAQEHPEAGILLP
EEEEECCCCEEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEE
CLDPGEECDVPTELERGSFGAMVISRELYRQIGGLDEGMDGGVWCLKDYTRRANAKGFVT
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHCCCCCEEEE
VQVPTPVVHHQEEARLGSEQRRRETQQRSIALFRERWGVGGSYILHVPKGVEVELLGEKL
EEECCCHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHH
QWLVKGARRDDSYTVLLPASLNQAAQQAGFGKLHEHVTLVPLPRLAWDGMKKRLFDKIAS
HHHHHHCCCCCCEEEEEECHHHHHHHHCCCHHHHHCEEEEECCHHHHHHHHHHHHHHHHC
QKPGTTPVTAVDGIPFPWSERYLSFSELCERIKARYQ
CCCCCCCEEEECCCCCCHHHHHCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA