Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197118868

Identifier: 197118868

GI number: 197118868

Start: 2883233

End: 2884891

Strand: Direct

Name: 197118868

Synonym: Gbem_2491

Alternate gene names: NA

Gene position: 2883233-2884891 (Clockwise)

Preceding gene: 197118867

Following gene: 197118869

Centisome position: 62.47

GC content: 63.35

Gene sequence:

>1659_bases
ATGAAAACTCGAACAATCTGCTCCTGCCTCATCCTCGTACTTTGCTCGCCTTTGGCCGTCTCTGCCCAGACCACCAGCCT
GGAAGCCAGATCCGCGATTCAGTCCGTCACCGTCTTCTCGGACCGGGCCCAGGTGACCCGAAAGGCGACGCTGTCGCTGA
AAGCTGGGACCAACCTGGTCAGCTTCGACAACCTCCCCCAGGTGCTGGACGAGGAGTCACTTCGTGCCGTGGGGAAAGGG
ACGGCGCCTGCCCGCATCGCCGGTATTACGGTGAAAAGGGTTTTCCTGGACCGGGCGCGGGACCAGCGGGTGCGCGAGCT
GGAGGATGAGATCGCCGCCCTCACCCGCCAGGTGGAAAGCATCGAAGCCAAGCGCAAGGCGCTCGCCTCCCAGAGGGCCT
TCATCGATTCCATCCGCGTCGGCTGGTCCGAACGGATCTCCAAGGAGCTTTCCGCCGGCAAGCCCACCGCTGCCGAGCTG
GGAGAGGCGGTGCGCTTCGTGGGTGACAACGTGGGCAAAGTGGAGCAGCAGCTCTACGATGCGGAAGCGGCCAAGAAGCC
CCTCAACGAGAAGATAGCTGCGCTCAGGAAAGAGCTGGAGCAAAACCTCGCCAACCGGCACAGGGAAGTGAAGTCGGCGC
AGGTGGCCATAGAGGCGCAGCAGGACCTCAAGTTCGACCTAGACCTCTCCTACCTGGTGAGCCAGGCCACCTGGGAGCCC
CTCTACGACGTGCGTCTCGGCGCCGACGGCAAGGAGGCGGAACTCGTCTACCGTGCCCAGGTGGCGCAGAAAACCGGGGA
GAACTGGCCCGGCGTGAAGCTTTCCCTTTCCACGGCTGCCCCCGAGGTCGGCGGAGGCGCGCCGGAGCTCTCCCCTTGGC
ATATCTCCTTCTACGAGCCCCCTCGGCCCATGGCCTACGCCGGCCGGGCCATGAAGGAGATGGCAGCCCCCGCTCCCGCG
CCGATGGCTGCCGGCGCCTATCCGCTGGAAGCGCGGGAAGACCGGGGCGAGGAAGCGCAGCCTCTGACCTCGGACGTGGC
GCAGGGGCAGACCTCGGTGCTCTTCCAGGTGCTGCAACCGGTGGATGTACCGTCCGACGGCACCCGCGCAGGGAGCGTCA
TTGCCAGCGAAAAGGTGCCGGTCAGCGCCGAGTACCTGACCGTCCCGAAACTTTCCCCGCGCGTCTATCTCAAGTCGAAG
GTCCGGAACAACACCCCCTACCCGCTTCTGGCCGGGGAGGTGAACATCTTCAACGACGCCACCTTCGTCGGCAAAAGCCG
AATAAAAACCGTAAGCTCCGGCGAAGAATTCGACCTTTACTTCGGATCCGACGACCAGGTGAAGGTGAAGCGGGAAGCGG
CCAGGGTGGCGAAAAAGGCGGGGCTCATCAGCGGCAACAACGTGACCTACCATGTAGTGATCGAACTGGTGAACTTCAAG
AAGAGGGGGGTGGCGCTGACCCTTCTCGACCAGCAGCCGCTTCCCTCCAATGCGGAAATCAAGGTAAAGCTCGAAGAGGC
AGATCCGCGTCCCTCCGGCACCAAGGAAGACGGGACGCTGGAATGGAAGCTGAACCTAGCCCCGGGGGAGAAAAAGAAGG
TCTCCTACGACATCGTCATCGAATACCCCAAGGGGCGCGAACTGGCGGGAATGGAATAG

Upstream 100 bases:

>100_bases
CAGCTTGGGAACGCAAGGCTGGCAAAGCTCCAGCTTGGATACGAGAACCTATTACAGTCAAAACACTCCCAACATCAGCT
TGTTGACACCGAGGTCCTCA

Downstream 100 bases:

>100_bases
AGACACGAACCTGAACGAAAGGAAGCCATGAGAACTTTATTTATTGCGGTAACGCTTGTGCTATGCACCGTTTCCCTTTC
ACTGGCAGTGAAATTCGACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 552; Mature: 552

Protein sequence:

>552_residues
MKTRTICSCLILVLCSPLAVSAQTTSLEARSAIQSVTVFSDRAQVTRKATLSLKAGTNLVSFDNLPQVLDEESLRAVGKG
TAPARIAGITVKRVFLDRARDQRVRELEDEIAALTRQVESIEAKRKALASQRAFIDSIRVGWSERISKELSAGKPTAAEL
GEAVRFVGDNVGKVEQQLYDAEAAKKPLNEKIAALRKELEQNLANRHREVKSAQVAIEAQQDLKFDLDLSYLVSQATWEP
LYDVRLGADGKEAELVYRAQVAQKTGENWPGVKLSLSTAAPEVGGGAPELSPWHISFYEPPRPMAYAGRAMKEMAAPAPA
PMAAGAYPLEAREDRGEEAQPLTSDVAQGQTSVLFQVLQPVDVPSDGTRAGSVIASEKVPVSAEYLTVPKLSPRVYLKSK
VRNNTPYPLLAGEVNIFNDATFVGKSRIKTVSSGEEFDLYFGSDDQVKVKREAARVAKKAGLISGNNVTYHVVIELVNFK
KRGVALTLLDQQPLPSNAEIKVKLEEADPRPSGTKEDGTLEWKLNLAPGEKKKVSYDIVIEYPKGRELAGME

Sequences:

>Translated_552_residues
MKTRTICSCLILVLCSPLAVSAQTTSLEARSAIQSVTVFSDRAQVTRKATLSLKAGTNLVSFDNLPQVLDEESLRAVGKG
TAPARIAGITVKRVFLDRARDQRVRELEDEIAALTRQVESIEAKRKALASQRAFIDSIRVGWSERISKELSAGKPTAAEL
GEAVRFVGDNVGKVEQQLYDAEAAKKPLNEKIAALRKELEQNLANRHREVKSAQVAIEAQQDLKFDLDLSYLVSQATWEP
LYDVRLGADGKEAELVYRAQVAQKTGENWPGVKLSLSTAAPEVGGGAPELSPWHISFYEPPRPMAYAGRAMKEMAAPAPA
PMAAGAYPLEAREDRGEEAQPLTSDVAQGQTSVLFQVLQPVDVPSDGTRAGSVIASEKVPVSAEYLTVPKLSPRVYLKSK
VRNNTPYPLLAGEVNIFNDATFVGKSRIKTVSSGEEFDLYFGSDDQVKVKREAARVAKKAGLISGNNVTYHVVIELVNFK
KRGVALTLLDQQPLPSNAEIKVKLEEADPRPSGTKEDGTLEWKLNLAPGEKKKVSYDIVIEYPKGRELAGME
>Mature_552_residues
MKTRTICSCLILVLCSPLAVSAQTTSLEARSAIQSVTVFSDRAQVTRKATLSLKAGTNLVSFDNLPQVLDEESLRAVGKG
TAPARIAGITVKRVFLDRARDQRVRELEDEIAALTRQVESIEAKRKALASQRAFIDSIRVGWSERISKELSAGKPTAAEL
GEAVRFVGDNVGKVEQQLYDAEAAKKPLNEKIAALRKELEQNLANRHREVKSAQVAIEAQQDLKFDLDLSYLVSQATWEP
LYDVRLGADGKEAELVYRAQVAQKTGENWPGVKLSLSTAAPEVGGGAPELSPWHISFYEPPRPMAYAGRAMKEMAAPAPA
PMAAGAYPLEAREDRGEEAQPLTSDVAQGQTSVLFQVLQPVDVPSDGTRAGSVIASEKVPVSAEYLTVPKLSPRVYLKSK
VRNNTPYPLLAGEVNIFNDATFVGKSRIKTVSSGEEFDLYFGSDDQVKVKREAARVAKKAGLISGNNVTYHVVIELVNFK
KRGVALTLLDQQPLPSNAEIKVKLEEADPRPSGTKEDGTLEWKLNLAPGEKKKVSYDIVIEYPKGRELAGME

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI17566996, Length=552, Percent_Identity=25.5434782608696, Blast_Score=151, Evalue=9e-37,
Organism=Caenorhabditis elegans, GI17566994, Length=559, Percent_Identity=25.4025044722719, Blast_Score=140, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI115534513, Length=366, Percent_Identity=24.5901639344262, Blast_Score=120, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17566992, Length=531, Percent_Identity=24.4821092278719, Blast_Score=118, Evalue=7e-27,
Organism=Caenorhabditis elegans, GI71988071, Length=536, Percent_Identity=24.0671641791045, Blast_Score=110, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI71988077, Length=310, Percent_Identity=22.9032258064516, Blast_Score=74, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60207; Mature: 60207

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTRTICSCLILVLCSPLAVSAQTTSLEARSAIQSVTVFSDRAQVTRKATLSLKAGTNLV
CCHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHEHHHHHHHHHHEEEEECCCCEE
SFDNLPQVLDEESLRAVGKGTAPARIAGITVKRVFLDRARDQRVRELEDEIAALTRQVES
ECCCCHHHHCHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEAKRKALASQRAFIDSIRVGWSERISKELSAGKPTAAELGEAVRFVGDNVGKVEQQLYD
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHH
AEAAKKPLNEKIAALRKELEQNLANRHREVKSAQVAIEAQQDLKFDLDLSYLVSQATWEP
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEECCCHHHHHHHHCCCC
LYDVRLGADGKEAELVYRAQVAQKTGENWPGVKLSLSTAAPEVGGGAPELSPWHISFYEP
CEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCC
PRPMAYAGRAMKEMAAPAPAPMAAGAYPLEAREDRGEEAQPLTSDVAQGQTSVLFQVLQP
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHC
VDVPSDGTRAGSVIASEKVPVSAEYLTVPKLSPRVYLKSKVRNNTPYPLLAGEVNIFNDA
CCCCCCCCCCCCEEECCCCCCCEEEEECCCCCCCCEEHHHHCCCCCCEEEECCEEEECCC
TFVGKSRIKTVSSGEEFDLYFGSDDQVKVKREAARVAKKAGLISGNNVTYHVVIELVNFK
EECCHHHHEECCCCCCEEEEECCCCCEEHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCC
KRGVALTLLDQQPLPSNAEIKVKLEEADPRPSGTKEDGTLEWKLNLAPGEKKKVSYDIVI
CCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEE
EYPKGRELAGME
ECCCCCCCCCCC
>Mature Secondary Structure
MKTRTICSCLILVLCSPLAVSAQTTSLEARSAIQSVTVFSDRAQVTRKATLSLKAGTNLV
CCHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHEHHHHHHHHHHEEEEECCCCEE
SFDNLPQVLDEESLRAVGKGTAPARIAGITVKRVFLDRARDQRVRELEDEIAALTRQVES
ECCCCHHHHCHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEAKRKALASQRAFIDSIRVGWSERISKELSAGKPTAAELGEAVRFVGDNVGKVEQQLYD
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHH
AEAAKKPLNEKIAALRKELEQNLANRHREVKSAQVAIEAQQDLKFDLDLSYLVSQATWEP
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEECCCHHHHHHHHCCCC
LYDVRLGADGKEAELVYRAQVAQKTGENWPGVKLSLSTAAPEVGGGAPELSPWHISFYEP
CEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCC
PRPMAYAGRAMKEMAAPAPAPMAAGAYPLEAREDRGEEAQPLTSDVAQGQTSVLFQVLQP
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHC
VDVPSDGTRAGSVIASEKVPVSAEYLTVPKLSPRVYLKSKVRNNTPYPLLAGEVNIFNDA
CCCCCCCCCCCCEEECCCCCCCEEEEECCCCCCCCEEHHHHCCCCCCEEEECCEEEECCC
TFVGKSRIKTVSSGEEFDLYFGSDDQVKVKREAARVAKKAGLISGNNVTYHVVIELVNFK
EECCHHHHEECCCCCCEEEEECCCCCEEHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCC
KRGVALTLLDQQPLPSNAEIKVKLEEADPRPSGTKEDGTLEWKLNLAPGEKKKVSYDIVI
CCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEE
EYPKGRELAGME
ECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA