Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

Click here to switch to the map view.

The map label for this gene is 197118853

Identifier: 197118853

GI number: 197118853

Start: 2869301

End: 2869945

Strand: Direct

Name: 197118853

Synonym: Gbem_2476

Alternate gene names: NA

Gene position: 2869301-2869945 (Clockwise)

Preceding gene: 197118852

Following gene: 197118854

Centisome position: 62.17

GC content: 59.38

Gene sequence:

>645_bases
ATGAAGATAATCGCGATCAACGGCAGCCCGAGGAAAAAGTGGAACACGGCAACCCTGCTGGAGAAGGCTCTCGAAGGGGC
GGCTTCGGCCGGTGCCGAGACGGAACTGATTCATCTGTACGACTTGAACTACAAGGGATGCATCAGCTGCTTCGCCTGCA
AGCTCAAGGGTGGCAAGAGCTACGGCAAGTGCGCCATGCGGGACGAGCTCACCCCTGTGCTGGATAGAATCGCCGCTGCC
GACGCCTTCGTACTCGGCTCCCCGGTGTACTTTGGAACGGTGACCGGAGAGATGCACTCGTTCATGGAGCGGCTCCTCTT
CCAGTACCTGGTGTACAGCAACCCGCCGACGACGCTCTTTCCCCGCCGCATCCGCACGGGGTTCATCTACACCATGAACG
TCTCCGAAGAGATCATGAAGCAGTACTCCTACCCTATCCACATCGGCCTCAACGAGGGGGTCCTCGCACGTAACTTCGCC
GCCTGCGAAACGCTCTGCGCCAACGAGACGCTGCAGTTCGAGGACTACGACAAGGTGGTCTTCAACTACTTCGATCCGGC
GCAAAGACGCGAACGGTACCAGAAGCAGTTTCCCGAAGACTGCAAGAAGGCGTTCGCGCTCGGCGCGCGGCTGGTGCAAC
CATGA

Upstream 100 bases:

>100_bases
CCAACATCCTGCAGTTGAGAGATCAACTGGGACAAAAGATGAACCAACGGCTGGTCACGCTGTAGGCAAAGAGTCGCAGT
AACGACAGGCGGGACGATAG

Downstream 100 bases:

>100_bases
GCCAGGCAACGATGGAGAGCGAAGCAGAGAACGCAACTTGCCTGATCCTGGTCGACCTGCAAAACGATTACTTCCCAGGC
GGCAGCATGGAACTCGTAGG

Product: multimeric flavodoxin family protein

Products: NA

Alternate protein names: Isf-2; MCJ-2; Mj2 [H]

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MKIIAINGSPRKKWNTATLLEKALEGAASAGAETELIHLYDLNYKGCISCFACKLKGGKSYGKCAMRDELTPVLDRIAAA
DAFVLGSPVYFGTVTGEMHSFMERLLFQYLVYSNPPTTLFPRRIRTGFIYTMNVSEEIMKQYSYPIHIGLNEGVLARNFA
ACETLCANETLQFEDYDKVVFNYFDPAQRRERYQKQFPEDCKKAFALGARLVQP

Sequences:

>Translated_214_residues
MKIIAINGSPRKKWNTATLLEKALEGAASAGAETELIHLYDLNYKGCISCFACKLKGGKSYGKCAMRDELTPVLDRIAAA
DAFVLGSPVYFGTVTGEMHSFMERLLFQYLVYSNPPTTLFPRRIRTGFIYTMNVSEEIMKQYSYPIHIGLNEGVLARNFA
ACETLCANETLQFEDYDKVVFNYFDPAQRRERYQKQFPEDCKKAFALGARLVQP
>Mature_214_residues
MKIIAINGSPRKKWNTATLLEKALEGAASAGAETELIHLYDLNYKGCISCFACKLKGGKSYGKCAMRDELTPVLDRIAAA
DAFVLGSPVYFGTVTGEMHSFMERLLFQYLVYSNPPTTLFPRRIRTGFIYTMNVSEEIMKQYSYPIHIGLNEGVLARNFA
ACETLCANETLQFEDYDKVVFNYFDPAQRRERYQKQFPEDCKKAFALGARLVQP

Specific function: Redox-active protein probably involved in electron transport [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ssuE family. Isf subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005025 [H]

Pfam domain/function: PF03358 FMN_red [H]

EC number: NA

Molecular weight: Translated: 24205; Mature: 24205

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIAINGSPRKKWNTATLLEKALEGAASAGAETELIHLYDLNYKGCISCFACKLKGGKS
CEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCC
YGKCAMRDELTPVLDRIAAADAFVLGSPVYFGTVTGEMHSFMERLLFQYLVYSNPPTTLF
CCCCHHHHHHHHHHHHHHHHHHHEECCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCC
PRRIRTGFIYTMNVSEEIMKQYSYPIHIGLNEGVLARNFAACETLCANETLQFEDYDKVV
CHHHCCCEEEEECCHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHH
FNYFDPAQRRERYQKQFPEDCKKAFALGARLVQP
HHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKIIAINGSPRKKWNTATLLEKALEGAASAGAETELIHLYDLNYKGCISCFACKLKGGKS
CEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCC
YGKCAMRDELTPVLDRIAAADAFVLGSPVYFGTVTGEMHSFMERLLFQYLVYSNPPTTLF
CCCCHHHHHHHHHHHHHHHHHHHEECCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCC
PRRIRTGFIYTMNVSEEIMKQYSYPIHIGLNEGVLARNFAACETLCANETLQFEDYDKVV
CHHHCCCEEEEECCHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHH
FNYFDPAQRRERYQKQFPEDCKKAFALGARLVQP
HHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]