Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is sfsA

Identifier: 197118843

GI number: 197118843

Start: 2854658

End: 2855353

Strand: Direct

Name: sfsA

Synonym: Gbem_2466

Alternate gene names: 197118843

Gene position: 2854658-2855353 (Clockwise)

Preceding gene: 197118834

Following gene: 197118844

Centisome position: 61.85

GC content: 66.81

Gene sequence:

>696_bases
ATGAAACTGCCGCAGCCGCTTTTCCAGGGGACCCTGATCCGACGCTACCAGCGCTTTTTGGCGGACGTCGAGCTGGATGA
CGGGACCGTGGTCACCGCCCACACCCCCAACACCGGGAGCATGATGGGGTGCGCCTGCCCCGGCAACCGGGTCCTCCTCT
CCAAAAGCGCGAGCCTCACCAGGAAATACCCGCACAGCTGGGAGCTGGTGCAGGCCGACGGGACCTGGGTCGGGATCAAC
ACCCAACTCCCCAACCTCCTCGCCAGGGAGGCGATCCTGGACGGGACCATTTCAGAGCTCTCCGGGTACCAGCAGATCCG
CGGCGAGGTCCCCTACGGCAGCGGCAGCCGGATCGACCTTCTGCTCTCCGGGGAGCAGGGGCTTTGCTACGTGGAGACCA
AGAACGTCACCCTGGTCGAGGACGGCGTCGCCCTCTTCCCCGACGCGGTGAGCGCCCGGGGGCAAAAGCACCTGAGGGAG
CTCATGGAGATGGTGCGCCAGGGACACCGGGCCGTTAACCTCTTCATCGTGCAGCGTGCAGACGGCGCGGCCCTTGCCCC
TGCCGACGCCATCGACCCCGTCTACGGGCGGCTCTTGAGAGAGGCGGCGCAAAACGGGGTTGAAATTCTCGCCTACCGCG
CCGAGGTGACCCGGACCGAGGTGCGCCTGGAACGCGCGCTGCCTGTGCTGCTCTAA

Upstream 100 bases:

>100_bases
CGGGGCGTATTTTTCTCTGGACAGCACGGGCCGCCAGCGGGTACCCTTTTCACCTCATTTGTCAAGCGTCCCGGCTCTCC
GCTGGGGCGAAGGAGCAAGC

Downstream 100 bases:

>100_bases
ACGGTTGACATCCCTAGGAAGGACGCTAGAGTTATAAGCGCTGTCCCGGGGGTCCAATGAGAATTCCAAGATTTACCATA
TACGCCAAGGAGACCGGCGT

Product: sugar fermentation stimulation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MKLPQPLFQGTLIRRYQRFLADVELDDGTVVTAHTPNTGSMMGCACPGNRVLLSKSASLTRKYPHSWELVQADGTWVGIN
TQLPNLLAREAILDGTISELSGYQQIRGEVPYGSGSRIDLLLSGEQGLCYVETKNVTLVEDGVALFPDAVSARGQKHLRE
LMEMVRQGHRAVNLFIVQRADGAALAPADAIDPVYGRLLREAAQNGVEILAYRAEVTRTEVRLERALPVLL

Sequences:

>Translated_231_residues
MKLPQPLFQGTLIRRYQRFLADVELDDGTVVTAHTPNTGSMMGCACPGNRVLLSKSASLTRKYPHSWELVQADGTWVGIN
TQLPNLLAREAILDGTISELSGYQQIRGEVPYGSGSRIDLLLSGEQGLCYVETKNVTLVEDGVALFPDAVSARGQKHLRE
LMEMVRQGHRAVNLFIVQRADGAALAPADAIDPVYGRLLREAAQNGVEILAYRAEVTRTEVRLERALPVLL
>Mature_231_residues
MKLPQPLFQGTLIRRYQRFLADVELDDGTVVTAHTPNTGSMMGCACPGNRVLLSKSASLTRKYPHSWELVQADGTWVGIN
TQLPNLLAREAILDGTISELSGYQQIRGEVPYGSGSRIDLLLSGEQGLCYVETKNVTLVEDGVALFPDAVSARGQKHLRE
LMEMVRQGHRAVNLFIVQRADGAALAPADAIDPVYGRLLREAAQNGVEILAYRAEVTRTEVRLERALPVLL

Specific function: Probable Regulatory Factor Involved In Maltose Metabolism. [C]

COG id: COG1489

COG function: function code R; DNA-binding protein, stimulates sugar fermentation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sfsA family

Homologues:

Organism=Escherichia coli, GI1786340, Length=234, Percent_Identity=50.4273504273504, Blast_Score=229, Evalue=1e-61,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): SFSA_GEOBB (B5EG09)

Other databases:

- EMBL:   CP001124
- RefSeq:   YP_002139270.1
- GeneID:   6782463
- GenomeReviews:   CP001124_GR
- KEGG:   gbm:Gbem_2466
- HOGENOM:   HBG655520
- OMA:   NTGSMLN
- ProtClustDB:   CLSK828952
- HAMAP:   MF_00095
- InterPro:   IPR005224
- TIGRFAMs:   TIGR00230

Pfam domain/function: PF03749 SfsA

EC number: NA

Molecular weight: Translated: 25337; Mature: 25337

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLPQPLFQGTLIRRYQRFLADVELDDGTVVTAHTPNTGSMMGCACPGNRVLLSKSASLT
CCCCCHHHHHHHHHHHHHHHHCEEECCCEEEEEECCCCCCEEEEECCCCEEEEECCCHHH
RKYPHSWELVQADGTWVGINTQLPNLLAREAILDGTISELSGYQQIRGEVPYGSGSRIDL
HCCCCCEEEEEECCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEE
LLSGEQGLCYVETKNVTLVEDGVALFPDAVSARGQKHLRELMEMVRQGHRAVNLFIVQRA
EEECCCCEEEEEECCEEEEECCCEECCHHHHHCCHHHHHHHHHHHHCCCCEEEEEEEEEC
DGAALAPADAIDPVYGRLLREAAQNGVEILAYRAEVTRTEVRLERALPVLL
CCCCCCCCHHCCHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKLPQPLFQGTLIRRYQRFLADVELDDGTVVTAHTPNTGSMMGCACPGNRVLLSKSASLT
CCCCCHHHHHHHHHHHHHHHHCEEECCCEEEEEECCCCCCEEEEECCCCEEEEECCCHHH
RKYPHSWELVQADGTWVGINTQLPNLLAREAILDGTISELSGYQQIRGEVPYGSGSRIDL
HCCCCCEEEEEECCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEE
LLSGEQGLCYVETKNVTLVEDGVALFPDAVSARGQKHLRELMEMVRQGHRAVNLFIVQRA
EEECCCCEEEEEECCEEEEECCCEECCHHHHHCCHHHHHHHHHHHHCCCCEEEEEEEEEC
DGAALAPADAIDPVYGRLLREAAQNGVEILAYRAEVTRTEVRLERALPVLL
CCCCCCCCHHCCHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA