| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118814
Identifier: 197118814
GI number: 197118814
Start: 2825209
End: 2826318
Strand: Reverse
Name: 197118814
Synonym: Gbem_2437
Alternate gene names: NA
Gene position: 2826318-2825209 (Counterclockwise)
Preceding gene: 197118819
Following gene: 197118813
Centisome position: 61.24
GC content: 64.05
Gene sequence:
>1110_bases ATGAGTCTCTTTAGGGCGTTGATCATACTGGTAATTTGCCTCGCGGCCGGCGGCAGCGTGGCGGCGATGCGTCCGGAGAC GGTCAGGGTCGCCCTCTCCAAGGGTGTCGATAGCGTCAGGATCGACGGCTCCGGCGTCCTTCTGACGGACGGCCGCGGCG AACCTCTCGACCTGGAAATGCCCCTTGAGGTGAAAAGATCTTTTAGCGGCGTGTCGGTCAACGGCAAGAGCGTCGACCGC CTGATCGCCGTGGCTCCCGGCAGGCTCAGCGTCAACGGCAAGGGTTACCGCGCTGTAGTGGAAGTGAGCCCCGCGCAGAA GGGGCTTTTGGTGGTGAACGACCTGCCGCTGGAGGAGTACCTGGTTGGCCTCATCAACTGCGAGATCTCCTCGGCCTGGC CCATGGAGGCCGTGAAGGCGCAGGCGGTGATCGCCCGTTCCTACGCCGTTTACCAGATGCAGGCCAGGCGCGGGGCTCCC TACCAGCTGGAGTCGAGCGTCATGGACCAGGTCTACGAGGGGGCGGATGTCGAGGACAGCCGTGCTGCCAGAGGCGTCGA GGAGACCGCCGGCCAGGTGCTCACCTACGAAGGCAAGACCATCCAGGCCTTCTACCATTCCAACTGCGCCGGGCACACCG AGAATTCCAAAAACGTCTGGGGGATGTCGATCCCGTATTTGCAGGGAGTCGCCTGCCTTTACTGCGGCGAGTCCAACCCC ATCAAGTGGGAACTGAAGCTCCCCCTGAAGAAGGTTGAGTCTGCGCTCCGTGCGGCGGGGTACCAGGTGGCGGGGATAAG GGAGTGCCGGGTGCGCGGCAGAAACGATAGCGGGCGCGTGCAGGACGTCTTGGTCGACTCCTCCCGCAGCAAGGTAGCAG TCCCAGGCGTCGCCTTCAGGAAGGCGCTCGGCTACGGCGCCGTGAAGAGCACCAACTTCGAGCTGCGCCAATCGGGTGAC GAGCTTTTGGTCGTCGGTTCGGGTTCGGGCCACGGCGTGGGGCTCTGCCAGTGGGGCGCCAAGGGGCGCGCCATCGAGGG GTTCGATTACCGCGAGATACTCAGTTACTACTATCCGGGCGTGAAGCTTGCGGGCGGGTACGGTCGATAG
Upstream 100 bases:
>100_bases GTTTCGTTAGAACGATAAAATTATTGACTTTGCCGGTGATTCCATGGTTTATATCTAGGGCTTTTCACGGTGGGGTAAAC AGCTGTTGTATACGGAAAAT
Downstream 100 bases:
>100_bases CATGTTTCTTTCCGATTTCGATTACGAACTTCCACCGGAGCTGATAGCGCAGCACCCGGCGAGCCGCAGGGACGCCTCCA GGCTTTTGACCCTTGACCGC
Product: cell division protein
Products: NA
Alternate protein names: H-34 [H]
Number of amino acids: Translated: 369; Mature: 368
Protein sequence:
>369_residues MSLFRALIILVICLAAGGSVAAMRPETVRVALSKGVDSVRIDGSGVLLTDGRGEPLDLEMPLEVKRSFSGVSVNGKSVDR LIAVAPGRLSVNGKGYRAVVEVSPAQKGLLVVNDLPLEEYLVGLINCEISSAWPMEAVKAQAVIARSYAVYQMQARRGAP YQLESSVMDQVYEGADVEDSRAARGVEETAGQVLTYEGKTIQAFYHSNCAGHTENSKNVWGMSIPYLQGVACLYCGESNP IKWELKLPLKKVESALRAAGYQVAGIRECRVRGRNDSGRVQDVLVDSSRSKVAVPGVAFRKALGYGAVKSTNFELRQSGD ELLVVGSGSGHGVGLCQWGAKGRAIEGFDYREILSYYYPGVKLAGGYGR
Sequences:
>Translated_369_residues MSLFRALIILVICLAAGGSVAAMRPETVRVALSKGVDSVRIDGSGVLLTDGRGEPLDLEMPLEVKRSFSGVSVNGKSVDR LIAVAPGRLSVNGKGYRAVVEVSPAQKGLLVVNDLPLEEYLVGLINCEISSAWPMEAVKAQAVIARSYAVYQMQARRGAP YQLESSVMDQVYEGADVEDSRAARGVEETAGQVLTYEGKTIQAFYHSNCAGHTENSKNVWGMSIPYLQGVACLYCGESNP IKWELKLPLKKVESALRAAGYQVAGIRECRVRGRNDSGRVQDVLVDSSRSKVAVPGVAFRKALGYGAVKSTNFELRQSGD ELLVVGSGSGHGVGLCQWGAKGRAIEGFDYREILSYYYPGVKLAGGYGR >Mature_368_residues SLFRALIILVICLAAGGSVAAMRPETVRVALSKGVDSVRIDGSGVLLTDGRGEPLDLEMPLEVKRSFSGVSVNGKSVDRL IAVAPGRLSVNGKGYRAVVEVSPAQKGLLVVNDLPLEEYLVGLINCEISSAWPMEAVKAQAVIARSYAVYQMQARRGAPY QLESSVMDQVYEGADVEDSRAARGVEETAGQVLTYEGKTIQAFYHSNCAGHTENSKNVWGMSIPYLQGVACLYCGESNPI KWELKLPLKKVESALRAAGYQVAGIRECRVRGRNDSGRVQDVLVDSSRSKVAVPGVAFRKALGYGAVKSTNFELRQSGDE LLVVGSGSGHGVGLCQWGAKGRAIEGFDYREILSYYYPGVKLAGGYGR
Specific function: Might be involved in sporulation [H]
COG id: COG2385
COG function: function code D; Sporulation protein and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013486 - InterPro: IPR013693 [H]
Pfam domain/function: PF08486 SpoIID [H]
EC number: NA
Molecular weight: Translated: 39605; Mature: 39474
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: PS00626 RCC1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLFRALIILVICLAAGGSVAAMRPETVRVALSKGVDSVRIDGSGVLLTDGRGEPLDLEM CHHHHHHHHHHHHHHCCCCEEEECCHHEEEEECCCCCEEEECCCEEEEECCCCCCEEECC PLEVKRSFSGVSVNGKSVDRLIAVAPGRLSVNGKGYRAVVEVSPAQKGLLVVNDLPLEEY CHHHHHCCCCEEECCCCCCEEEEECCCEEEECCCCEEEEEEECCCCCCEEEEECCCHHHH LVGLINCEISSAWPMEAVKAQAVIARSYAVYQMQARRGAPYQLESSVMDQVYEGADVEDS HEEHEEEECCCCCCHHHHHHHHHHHHHHHEEEEHHHCCCCEEHHHHHHHHHHCCCCCCHH RAARGVEETAGQVLTYEGKTIQAFYHSNCAGHTENSKNVWGMSIPYLQGVACLYCGESNP HHHCCHHHHCCCEEEECCCEEEEEEECCCCCCCCCCCCEEEEECHHHHCEEEEEECCCCC IKWELKLPLKKVESALRAAGYQVAGIRECRVRGRNDSGRVQDVLVDSSRSKVAVPGVAFR EEEEEECCHHHHHHHHHHCCCEEECCHHHEECCCCCCCCEEEEEECCCCCEEECCCHHHH KALGYGAVKSTNFELRQSGDELLVVGSGSGHGVGLCQWGAKGRAIEGFDYREILSYYYPG HHHCCCCEECCCCHHCCCCCEEEEEECCCCCCEEEEEECCCCCEECCCCHHHHHHHHCCC VKLAGGYGR EEECCCCCC >Mature Secondary Structure SLFRALIILVICLAAGGSVAAMRPETVRVALSKGVDSVRIDGSGVLLTDGRGEPLDLEM HHHHHHHHHHHHHHCCCCEEEECCHHEEEEECCCCCEEEECCCEEEEECCCCCCEEECC PLEVKRSFSGVSVNGKSVDRLIAVAPGRLSVNGKGYRAVVEVSPAQKGLLVVNDLPLEEY CHHHHHCCCCEEECCCCCCEEEEECCCEEEECCCCEEEEEEECCCCCCEEEEECCCHHHH LVGLINCEISSAWPMEAVKAQAVIARSYAVYQMQARRGAPYQLESSVMDQVYEGADVEDS HEEHEEEECCCCCCHHHHHHHHHHHHHHHEEEEHHHCCCCEEHHHHHHHHHHCCCCCCHH RAARGVEETAGQVLTYEGKTIQAFYHSNCAGHTENSKNVWGMSIPYLQGVACLYCGESNP HHHCCHHHHCCCEEEECCCEEEEEEECCCCCCCCCCCCEEEEECHHHHCEEEEEECCCCC IKWELKLPLKKVESALRAAGYQVAGIRECRVRGRNDSGRVQDVLVDSSRSKVAVPGVAFR EEEEEECCHHHHHHHHHHCCCEEECCHHHEECCCCCCCCEEEEEECCCCCEEECCCHHHH KALGYGAVKSTNFELRQSGDELLVVGSGSGHGVGLCQWGAKGRAIEGFDYREILSYYYPG HHHCCCCEECCCCHHCCCCCEEEEEECCCCCCEEEEEECCCCCEECCCCHHHHHHHHCCC VKLAGGYGR EEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA