| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is hnr [C]
Identifier: 197118799
GI number: 197118799
Start: 2808439
End: 2809317
Strand: Reverse
Name: hnr [C]
Synonym: Gbem_2420
Alternate gene names: 197118799
Gene position: 2809317-2808439 (Counterclockwise)
Preceding gene: 197118800
Following gene: 197118798
Centisome position: 60.87
GC content: 58.93
Gene sequence:
>879_bases ATGTCCGCCGACATCGAGTCTTTGAACACCACGCCGCAAATCCGCAAGCCGCTGGGAGAAATCTTCGTGGAGCGGGGGCT TTTAACCAAGGTATCGGTTGATCGCCTGATCGATCATGCCAAGAGCAAAGGGATCCGTCTCGGTGAGCTCTTGGAGGTGA TCGGGCTGGTTTCGCCCGAAGAACTGGCCGAGGCGCTGGCTATCCAGTACCGCTGCCGCAAGATCTCCGATTTTTCCAAG TACGCCTACTCCCCGGCAATGCTGCGTATGATACCGATGGAGATGGCGGTGAAGCACACCATTTTCCCGTTGAAGATGGA CGACGGGCGCCTCGGGCTCGCAGTTGCCGATCCGACCACGGACGAGCTTTTCCAGCAGATCGCTGCCATGCACAAGGTCA AGCTGATCCTTTACGTCGCGACCCGCATGGAGATAAACCGCGCCATCGCCAAGCACTACCTGGGCCAGCCGGTAACGGGC CCAGAGGGAAAAACCATCCTGCTCGTCGAGGATGACCAGCTCTCCCGCGAGATGGTGGCCAAGATCCTGATCAAGCACGG ATGCACCGTTGAGACGGCCATCGACGGCATGGATGCCTTCGCCAAGATCTTCGCCTTGAAGCCGAAGCTGGTGATCACGG ACAAGGTGATGCCCAAACTCGGGGGTTACGAGTTCCTTTACGCCATCCGCAACATCCCGGAGTTCCGCTACATGCCGGTG ATCCTGATGACTGCCGCCGCCACGCCGGACGAGGAAAAGGAGGCCCTGGAGAGGGGGTTCTTCGACTTCGTACTGAAACC GGTCAAGGAGATCGGGCTTATGACCCGGGTGAAAAGGGCCTTCCAGAGCAGGGAAGCCTTGTACGGCAAGACCGCCTAG
Upstream 100 bases:
>100_bases TCCCTCTCATTATGATGACTCGGGCCGCGCTGCCATGAGCGTAGCCGGCCGTGAAAATCACCGCGCGGTTGCCTGAGAGG CAGCTGCAGGAGCAGAAAGC
Downstream 100 bases:
>100_bases CCTCCCGCCCCCCATTTTCCCGCCCAGCCTAGAGGGGCCGCGTCTTTTACGCGGCCCCTCTTTTTTCGCTCCTTTCCTCT TGTTTCCTTCCTTTTTTATC
Product: GspIIEN domain-containing response regulator
Products: NA
Alternate protein names: ORF131 [H]
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MSADIESLNTTPQIRKPLGEIFVERGLLTKVSVDRLIDHAKSKGIRLGELLEVIGLVSPEELAEALAIQYRCRKISDFSK YAYSPAMLRMIPMEMAVKHTIFPLKMDDGRLGLAVADPTTDELFQQIAAMHKVKLILYVATRMEINRAIAKHYLGQPVTG PEGKTILLVEDDQLSREMVAKILIKHGCTVETAIDGMDAFAKIFALKPKLVITDKVMPKLGGYEFLYAIRNIPEFRYMPV ILMTAAATPDEEKEALERGFFDFVLKPVKEIGLMTRVKRAFQSREALYGKTA
Sequences:
>Translated_292_residues MSADIESLNTTPQIRKPLGEIFVERGLLTKVSVDRLIDHAKSKGIRLGELLEVIGLVSPEELAEALAIQYRCRKISDFSK YAYSPAMLRMIPMEMAVKHTIFPLKMDDGRLGLAVADPTTDELFQQIAAMHKVKLILYVATRMEINRAIAKHYLGQPVTG PEGKTILLVEDDQLSREMVAKILIKHGCTVETAIDGMDAFAKIFALKPKLVITDKVMPKLGGYEFLYAIRNIPEFRYMPV ILMTAAATPDEEKEALERGFFDFVLKPVKEIGLMTRVKRAFQSREALYGKTA >Mature_291_residues SADIESLNTTPQIRKPLGEIFVERGLLTKVSVDRLIDHAKSKGIRLGELLEVIGLVSPEELAEALAIQYRCRKISDFSKY AYSPAMLRMIPMEMAVKHTIFPLKMDDGRLGLAVADPTTDELFQQIAAMHKVKLILYVATRMEINRAIAKHYLGQPVTGP EGKTILLVEDDQLSREMVAKILIKHGCTVETAIDGMDAFAKIFALKPKLVITDKVMPKLGGYEFLYAIRNIPEFRYMPVI LMTAAATPDEEKEALERGFFDFVLKPVKEIGLMTRVKRAFQSREALYGKTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1787487, Length=110, Percent_Identity=35.4545454545455, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI87082012, Length=122, Percent_Identity=29.5081967213115, Blast_Score=63, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6322000, Length=127, Percent_Identity=32.2834645669291, Blast_Score=62, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 32774; Mature: 32643
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSADIESLNTTPQIRKPLGEIFVERGLLTKVSVDRLIDHAKSKGIRLGELLEVIGLVSPE CCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHH ELAEALAIQYRCRKISDFSKYAYSPAMLRMIPMEMAVKHTIFPLKMDDGRLGLAVADPTT HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEEEEECCCCEEEEECCCCH DELFQQIAAMHKVKLILYVATRMEINRAIAKHYLGQPVTGPEGKTILLVEDDQLSREMVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHH KILIKHGCTVETAIDGMDAFAKIFALKPKLVITDKVMPKLGGYEFLYAIRNIPEFRYMPV HHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHCCHHHHHHHHCCCCHHHHHH ILMTAAATPDEEKEALERGFFDFVLKPVKEIGLMTRVKRAFQSREALYGKTA HEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SADIESLNTTPQIRKPLGEIFVERGLLTKVSVDRLIDHAKSKGIRLGELLEVIGLVSPE CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHH ELAEALAIQYRCRKISDFSKYAYSPAMLRMIPMEMAVKHTIFPLKMDDGRLGLAVADPTT HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEEEEECCCCEEEEECCCCH DELFQQIAAMHKVKLILYVATRMEINRAIAKHYLGQPVTGPEGKTILLVEDDQLSREMVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHH KILIKHGCTVETAIDGMDAFAKIFALKPKLVITDKVMPKLGGYEFLYAIRNIPEFRYMPV HHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHCCHHHHHHHHCCCCHHHHHH ILMTAAATPDEEKEALERGFFDFVLKPVKEIGLMTRVKRAFQSREALYGKTA HEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7860607 [H]