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The map label for this gene is yjcL [H]

Identifier: 197118797

GI number: 197118797

Start: 2803987

End: 2805147

Strand: Direct

Name: yjcL [H]

Synonym: Gbem_2418

Alternate gene names: 197118797

Gene position: 2803987-2805147 (Clockwise)

Preceding gene: 197118796

Following gene: 308535303

Centisome position: 60.76

GC content: 66.06

Gene sequence:

>1161_bases
ATGATCAGCAACCCGGTTCTCATCGTAGCCGTCTTGATCTCCATCGAGGCCCTGGTCCTGTGGCTGTCGCGTCACGAGCG
GACCAGGCGCTATTTCGACCTGCTCCCCTCGGTCTTCTGGATCTATTTTCTCCCCATGCTGGCGGCGACCTTCGGGCTCA
TCGCAACCAAGAGCCCGGTCTACGGCTTCATCACCAGCTGGCTCCTCCCCGCAAGTCTCGTGCTGCTCCTTTTGCCGGTG
GACATCAAGGCGATCCTGAGGCTTGGCCCCACGGCCATCGCCATGTTCTTCATCGGCGCGGCCGGGATCATCGCCGGCGC
GGCCCTCTCCTTCTCCCTCTTCGAGCCGGTGATCGGAGCCCGGTTCTGGTCCGGCTTCGGGGCGATATCCGCCTCCTGGA
CCGGCGGCAGCGCCAACATGATCGCGGTGAAGGAGGCGCTTTCGGTCCCCGACGAGGTCTTCGCGCCCATGGTGATAGTG
GACACGGTGGTCCCCTACCTCTGGATGGGGTTCATGATCGCCATCGTCGGCCTGCAGCCTGCCTTCGACCGCTGGAACCG
CTCGAACCGAGCCACGCTGGATCACCTGGGGGAAGAGGCGGTGCAGTACCTCGCCACCGCCGGCGGCCGCACCTGGAGCG
GGATAGCGATATCCCTCGCCGTAGCCCTGGCAGGCGGGGTGGGCGCGCACCTTATCGGCGAACAGATGCCCCGGGTAAAG
GACATCTTGACCGGCTACACCTGGACCATCATGATCGTGACCCTCTTGGGGATACTCCTCTCCTTCTCCCCTTTGCGCCG
CCTGGAGCGCTCCGGCGCTTCGCGGACCGGCTACGATCTCCTCTACTTCGTCCTCACCGCCATCGGGGCCAAGGCGTCGG
TCGCGGACATCGGCTCGGCGCTGGTGCTTATCGGCGCGGGCCTCGTCATCGTCGCGGTCCACGCCGTCTTTCTGCTGGTC
GGGGCGCGCCTTTTGAAGGCGCCTATGTTCCTGGTAGCCGCAGCAAGCCAGGCCAACGTCGGCGGCGTCGCCTCCGCGCC
GGTGGTGGCCGAGGTGTACCATCCCGGCCTCGCCTCGGTGGGGCTGCTTCTGGCCATCCTGGGTAACATCGTCGGCACCT
GGCTCGGCATCCTAGCCGCCCAGCTCTGCCGCCTCCTGTGA

Upstream 100 bases:

>100_bases
TCCTGAAGGGTGAGCTGGCCCATTCCCCCTACCTCGACGAGCACGGGCGCTTCGACCTGCACGACGCCGGCCCCGGCATC
GGAGTCGAGCCCCGTTTTTC

Downstream 100 bases:

>100_bases
GCCCTCCTCCGGCTCCAGTATCTGTCGCAGCTTCCTGCTCATCTCCGCCAGTTTGTACGGCTTCTGCATTACCCCGGAAA
CCCCGCAGCCTTCGAACTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MISNPVLIVAVLISIEALVLWLSRHERTRRYFDLLPSVFWIYFLPMLAATFGLIATKSPVYGFITSWLLPASLVLLLLPV
DIKAILRLGPTAIAMFFIGAAGIIAGAALSFSLFEPVIGARFWSGFGAISASWTGGSANMIAVKEALSVPDEVFAPMVIV
DTVVPYLWMGFMIAIVGLQPAFDRWNRSNRATLDHLGEEAVQYLATAGGRTWSGIAISLAVALAGGVGAHLIGEQMPRVK
DILTGYTWTIMIVTLLGILLSFSPLRRLERSGASRTGYDLLYFVLTAIGAKASVADIGSALVLIGAGLVIVAVHAVFLLV
GARLLKAPMFLVAAASQANVGGVASAPVVAEVYHPGLASVGLLLAILGNIVGTWLGILAAQLCRLL

Sequences:

>Translated_386_residues
MISNPVLIVAVLISIEALVLWLSRHERTRRYFDLLPSVFWIYFLPMLAATFGLIATKSPVYGFITSWLLPASLVLLLLPV
DIKAILRLGPTAIAMFFIGAAGIIAGAALSFSLFEPVIGARFWSGFGAISASWTGGSANMIAVKEALSVPDEVFAPMVIV
DTVVPYLWMGFMIAIVGLQPAFDRWNRSNRATLDHLGEEAVQYLATAGGRTWSGIAISLAVALAGGVGAHLIGEQMPRVK
DILTGYTWTIMIVTLLGILLSFSPLRRLERSGASRTGYDLLYFVLTAIGAKASVADIGSALVLIGAGLVIVAVHAVFLLV
GARLLKAPMFLVAAASQANVGGVASAPVVAEVYHPGLASVGLLLAILGNIVGTWLGILAAQLCRLL
>Mature_386_residues
MISNPVLIVAVLISIEALVLWLSRHERTRRYFDLLPSVFWIYFLPMLAATFGLIATKSPVYGFITSWLLPASLVLLLLPV
DIKAILRLGPTAIAMFFIGAAGIIAGAALSFSLFEPVIGARFWSGFGAISASWTGGSANMIAVKEALSVPDEVFAPMVIV
DTVVPYLWMGFMIAIVGLQPAFDRWNRSNRATLDHLGEEAVQYLATAGGRTWSGIAISLAVALAGGVGAHLIGEQMPRVK
DILTGYTWTIMIVTLLGILLSFSPLRRLERSGASRTGYDLLYFVLTAIGAKASVADIGSALVLIGAGLVIVAVHAVFLLV
GARLLKAPMFLVAAASQANVGGVASAPVVAEVYHPGLASVGLLLAILGNIVGTWLGILAAQLCRLL

Specific function: Unknown

COG id: COG5505

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008537 [H]

Pfam domain/function: PF05684 DUF819 [H]

EC number: NA

Molecular weight: Translated: 40823; Mature: 40823

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISNPVLIVAVLISIEALVLWLSRHERTRRYFDLLPSVFWIYFLPMLAATFGLIATKSPV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
YGFITSWLLPASLVLLLLPVDIKAILRLGPTAIAMFFIGAAGIIAGAALSFSLFEPVIGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFWSGFGAISASWTGGSANMIAVKEALSVPDEVFAPMVIVDTVVPYLWMGFMIAIVGLQP
HHHHCCCCCEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
AFDRWNRSNRATLDHLGEEAVQYLATAGGRTWSGIAISLAVALAGGVGAHLIGEQMPRVK
HHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCHHHH
DILTGYTWTIMIVTLLGILLSFSPLRRLERSGASRTGYDLLYFVLTAIGAKASVADIGSA
HHHHCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH
LVLIGAGLVIVAVHAVFLLVGARLLKAPMFLVAAASQANVGGVASAPVVAEVYHPGLASV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCHHHH
GLLLAILGNIVGTWLGILAAQLCRLL
HHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MISNPVLIVAVLISIEALVLWLSRHERTRRYFDLLPSVFWIYFLPMLAATFGLIATKSPV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
YGFITSWLLPASLVLLLLPVDIKAILRLGPTAIAMFFIGAAGIIAGAALSFSLFEPVIGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFWSGFGAISASWTGGSANMIAVKEALSVPDEVFAPMVIVDTVVPYLWMGFMIAIVGLQP
HHHHCCCCCEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
AFDRWNRSNRATLDHLGEEAVQYLATAGGRTWSGIAISLAVALAGGVGAHLIGEQMPRVK
HHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCHHHH
DILTGYTWTIMIVTLLGILLSFSPLRRLERSGASRTGYDLLYFVLTAIGAKASVADIGSA
HHHHCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH
LVLIGAGLVIVAVHAVFLLVGARLLKAPMFLVAAASQANVGGVASAPVVAEVYHPGLASV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCHHHH
GLLLAILGNIVGTWLGILAAQLCRLL
HHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]