| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is cheY-13 [H]
Identifier: 197118765
GI number: 197118765
Start: 2764554
End: 2764925
Strand: Direct
Name: cheY-13 [H]
Synonym: Gbem_2384
Alternate gene names: 197118765
Gene position: 2764554-2764925 (Clockwise)
Preceding gene: 197118764
Following gene: 197118766
Centisome position: 59.9
GC content: 55.65
Gene sequence:
>372_bases GTGGCAAAAACGATACTGATCATTGACGACAGCGAGGTGGTCCTGACCATGGCCATGGACGCGCTGGTTCAGGCAGGATA CGAGGTGCTCACCGCCACCAACGGCATCGAAGCGAACCGCTTCATCTTCTCGAAAAAGAGGCCGGACCTGATCATCATGG ACATCATGATGCCGATGCTGGACGGCAACAAAAAGGCGAAGCTGCTCAAGGAGAACGAGGTAAGCAAGGACATCCCGATC CTGCTTCTTTCTTCCAAAAGCGAAAACGAGATGCGCGAGTTGGCGGCCGAGGCTGGGGCGAACGGCTACATCCTCAAGCC TTTCAGCGCAGAAGAGCTTACCGCGAAGGTGAAGAAGTCCCTGGAAGGGTGA
Upstream 100 bases:
>100_bases CTGGATCTCATGCCGGGGGCGATCGCGAAGCTTTTCGGCGTTGCGGCCGGCAACGAAGCACCACGACCAACAACCTCAGT GCAGATAAAGGAGGCAACTT
Downstream 100 bases:
>100_bases TCGTGCCGGGTGCCGCTGCACCACGATTGTAAAAAAACGAACAGTGAATTTTTTTACAGTTAGCGGAAAACCGCCGTGGT TTAGCGCACTTTTGCCCACC
Product: chemotaxis protein CheY
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MAKTILIIDDSEVVLTMAMDALVQAGYEVLTATNGIEANRFIFSKKRPDLIIMDIMMPMLDGNKKAKLLKENEVSKDIPI LLLSSKSENEMRELAAEAGANGYILKPFSAEELTAKVKKSLEG
Sequences:
>Translated_123_residues MAKTILIIDDSEVVLTMAMDALVQAGYEVLTATNGIEANRFIFSKKRPDLIIMDIMMPMLDGNKKAKLLKENEVSKDIPI LLLSSKSENEMRELAAEAGANGYILKPFSAEELTAKVKKSLEG >Mature_122_residues AKTILIIDDSEVVLTMAMDALVQAGYEVLTATNGIEANRFIFSKKRPDLIIMDIMMPMLDGNKKAKLLKENEVSKDIPIL LLSSKSENEMRELAAEAGANGYILKPFSAEELTAKVKKSLEG
Specific function: This protein is a positive regulator for the phosphate regulon. Transcription of this operon is positively regulated by phoB and phoR when phosphate is limited [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1786599, Length=119, Percent_Identity=36.1344537815126, Blast_Score=79, Evalue=1e-16, Organism=Escherichia coli, GI1788550, Length=118, Percent_Identity=35.5932203389831, Blast_Score=74, Evalue=3e-15, Organism=Escherichia coli, GI1788394, Length=117, Percent_Identity=35.042735042735, Blast_Score=67, Evalue=3e-13, Organism=Escherichia coli, GI87082012, Length=118, Percent_Identity=31.3559322033898, Blast_Score=66, Evalue=8e-13, Organism=Escherichia coli, GI1786784, Length=118, Percent_Identity=33.8983050847458, Blast_Score=64, Evalue=3e-12, Organism=Escherichia coli, GI1789809, Length=117, Percent_Identity=29.0598290598291, Blast_Score=61, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR011879 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 13532; Mature: 13401
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKTILIIDDSEVVLTMAMDALVQAGYEVLTATNGIEANRFIFSKKRPDLIIMDIMMPML CCCEEEEECCCCCHHHHHHHHHHHCCHHEEEECCCCCCCEEEEECCCCCEEEHHHHHHHH DGNKKAKLLKENEVSKDIPILLLSSKSENEMRELAAEAGANGYILKPFSAEELTAKVKKS CCCCCHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHH LEG CCC >Mature Secondary Structure AKTILIIDDSEVVLTMAMDALVQAGYEVLTATNGIEANRFIFSKKRPDLIIMDIMMPML CCEEEEECCCCCHHHHHHHHHHHCCHHEEEECCCCCCCEEEEECCCCCEEEHHHHHHHH DGNKKAKLLKENEVSKDIPILLLSSKSENEMRELAAEAGANGYILKPFSAEELTAKVKKS CCCCCHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHH LEG CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2115874; 10984043 [H]