| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
Click here to switch to the map view.
The map label for this gene is 197118758
Identifier: 197118758
GI number: 197118758
Start: 2754992
End: 2755564
Strand: Direct
Name: 197118758
Synonym: Gbem_2377
Alternate gene names: NA
Gene position: 2754992-2755564 (Clockwise)
Preceding gene: 197118755
Following gene: 197118760
Centisome position: 59.69
GC content: 61.26
Gene sequence:
>573_bases ATGAAGGTTCGTGACAGCGGCATGCCTGACGAGGAGATGTGGACCACTTTTTTCGATCCCGCCGCCATCTTCGGTACGCT GCAGATGGACCAGGGGCTGCACGACCTGGTGGAATTCGGCTGCGGCTACGGCACCTTTACCCTCGCCGCGGCGGGCATGG TCACGGGAATCGTACACGCGCTAGATATAGAACCGGAACTGGTGGAGCTGCTCAGAAAGAAATGCGCGGAGGCCGGTATC ACCAACGTCAGCCCCACGCTGCGCGATTTTATCGGAGAGGGAAGCGGGCTGAATGCGGGTTCGATGGATGGCGCCCTGCT CTTCAACATCCTGCACCACGATGAACCGGTGGCCCTGATGCGGGAGGCTTACCGCGTGCTGCGTCCCGGCGGAAGGCTCG CCGTCATCCACTGGAACTACGATCCCACCACGCCGCGCGGCCCCTCCCTGGAGATTCGACCGAAACCGGAGCAGTGCGTC GCATGGGCAAAGGAGGCGGGATTTTGCTTCAACCAAGGTGGCAGCCACGACCTTCCCCCCTATCACTACGGCTTGATCTT CATAAAGCCCTGA
Upstream 100 bases:
>100_bases TTAGGCCCCGGGGAACCTTTAGATTTTCATGTTGACTTAAAAGCTGGGCATTGATATTCAGCTGTCTCGGTATTAACTGC AGTGGCTATAGGAGAGAAAC
Downstream 100 bases:
>100_bases TGCGAGTTTCATCGACCTTCTCCAGCCAATACCTGCCAGATGCGCTCGGCGGCCCTGCCGTCCCACAACTGCGGTACCCT GGCCCGCCCCCGCTTCTCCA
Product: type 11 SAM-dependent methyltransferase
Products: NA
Alternate protein names: SAM-Dependent Methyltransferase; Methylase Involved In Ubiquinone/Menaquinone Biosynthesis; Methyltransferase Domain Family
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MKVRDSGMPDEEMWTTFFDPAAIFGTLQMDQGLHDLVEFGCGYGTFTLAAAGMVTGIVHALDIEPELVELLRKKCAEAGI TNVSPTLRDFIGEGSGLNAGSMDGALLFNILHHDEPVALMREAYRVLRPGGRLAVIHWNYDPTTPRGPSLEIRPKPEQCV AWAKEAGFCFNQGGSHDLPPYHYGLIFIKP
Sequences:
>Translated_190_residues MKVRDSGMPDEEMWTTFFDPAAIFGTLQMDQGLHDLVEFGCGYGTFTLAAAGMVTGIVHALDIEPELVELLRKKCAEAGI TNVSPTLRDFIGEGSGLNAGSMDGALLFNILHHDEPVALMREAYRVLRPGGRLAVIHWNYDPTTPRGPSLEIRPKPEQCV AWAKEAGFCFNQGGSHDLPPYHYGLIFIKP >Mature_190_residues MKVRDSGMPDEEMWTTFFDPAAIFGTLQMDQGLHDLVEFGCGYGTFTLAAAGMVTGIVHALDIEPELVELLRKKCAEAGI TNVSPTLRDFIGEGSGLNAGSMDGALLFNILHHDEPVALMREAYRVLRPGGRLAVIHWNYDPTTPRGPSLEIRPKPEQCV AWAKEAGFCFNQGGSHDLPPYHYGLIFIKP
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20859; Mature: 20859
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVRDSGMPDEEMWTTFFDPAAIFGTLQMDQGLHDLVEFGCGYGTFTLAAAGMVTGIVHA CCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHH LDIEPELVELLRKKCAEAGITNVSPTLRDFIGEGSGLNAGSMDGALLFNILHHDEPVALM HCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHHH REAYRVLRPGGRLAVIHWNYDPTTPRGPSLEIRPKPEQCVAWAKEAGFCFNQGGSHDLPP HHHHHHHCCCCCEEEEEECCCCCCCCCCCEEECCCHHHHHHHHHHCCCEECCCCCCCCCC YHYGLIFIKP EEEEEEEECC >Mature Secondary Structure MKVRDSGMPDEEMWTTFFDPAAIFGTLQMDQGLHDLVEFGCGYGTFTLAAAGMVTGIVHA CCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHH LDIEPELVELLRKKCAEAGITNVSPTLRDFIGEGSGLNAGSMDGALLFNILHHDEPVALM HCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHHH REAYRVLRPGGRLAVIHWNYDPTTPRGPSLEIRPKPEQCVAWAKEAGFCFNQGGSHDLPP HHHHHHHCCCCCEEEEEECCCCCCCCCCCEEECCCHHHHHHHHHHCCCEECCCCCCCCCC YHYGLIFIKP EEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA