| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is arsB-1 [H]
Identifier: 197118730
GI number: 197118730
Start: 2726744
End: 2727799
Strand: Reverse
Name: arsB-1 [H]
Synonym: Gbem_2349
Alternate gene names: 197118730
Gene position: 2727799-2726744 (Counterclockwise)
Preceding gene: 308535298
Following gene: 197118729
Centisome position: 59.11
GC content: 56.63
Gene sequence:
>1056_bases ATGTCTACCGGAGTTTCCCCAAAGCTGTCGTTTCTCGACCGCTATCTTACCCTTTGGATCTTCCTCGCCATGTTTGCAGG GGTGGGAGCGGGGTACTTGTTTCCGGGAGTTGAAAGTTTCATCAACAGCTTCCAGGTAGGGACCACCAACATCCCTATTG CCGCCGGCCTCATTCTCATGATGTACCCTCCCTTCGCCAAGGTGAAGTACGAGGAGATGCCGGAGGTCTTCCACAACAAA CGGGTTCTCGGGCTTTCGCTGGTTCAAAACTGGCTGATAGGGCCGGTTCTGATGTTCATCCTGGCTGTCGCCTTTCTTCC CGACAAGCCTGAGTACATGGTGGGACTCATCATGATAGGGCTCGCCAGATGCATCGCCATGGTCATCGTCTGGAACGATC TGGCAAAGGGAAACACCGAGTACGCTGCGGGGTTGGTCGCCTTCAACAGCATCTTCCAGGTCCTCTTCTACAGCGTCTAT GCCTGGTTCTTCATCACGGTCCTCCCGCCTCTGATCGGCCTGTCGGGCAGCATCGTGGAAGTCGGCATAGGGCAGATCGC CAAGAGTGTCTTTATCTACCTTGGCGTCCCGTTTATCGCCGGGGCCATCACGCGCCTGGTCGGCGTCAAGGTAATGGGGA AGGAACGCTACCACAGGGAGTTCGTGCCCAGGATCGGCCCGATCACACTGATTGCGCTTCTGTTCACCATCGTCGTCATG TTCAGCCTGAAGGGGAACCTCATCGTTCAGCTTCCTCTCGACGTCGTCCGGATCGCGGTACCGCTGCTCATCTATTTCGT CGCCATGTTCTTCGTCTCCTTCTGGATGGGGAAAAAGCTTGGGGCTGACTACAGCAAGACGACGACTCTTGCCTTCACCG CCGCGAGCAACAATTTCGAATTGGCCATCGCCGTTGCGGTCGCCGTTTTCGGACTCAATTCCGGCGCCGCGTTTGCCGCG GTGATCGGCCCATTGGTGGAAGTGCCGGTCATGATAGCCCTCGTGAATGTGGCTTTCTGGTTCCAGCGCCGCTACTTTTC CGGTTCCAGCCTTTGA
Upstream 100 bases:
>100_bases GAAGATCTCCTCTTTTGCCAAGGGCGCCAACTGCGCCTGATTTTTTTTCTGCCAGACATCCGCTCATTCGGATGTGAAGA ACTGTCTGTAAGGAGGACGC
Downstream 100 bases:
>100_bases CAGGAGACAGACGATGCAACAAAAAGTAAGGGTCTTGTTCGTTTGCATACATAACAGTGCCAGAAGCCAGATGGGCGAGG CGTTTCTGAAGCAAGCCGGC
Product: arsenite efflux pump
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MSTGVSPKLSFLDRYLTLWIFLAMFAGVGAGYLFPGVESFINSFQVGTTNIPIAAGLILMMYPPFAKVKYEEMPEVFHNK RVLGLSLVQNWLIGPVLMFILAVAFLPDKPEYMVGLIMIGLARCIAMVIVWNDLAKGNTEYAAGLVAFNSIFQVLFYSVY AWFFITVLPPLIGLSGSIVEVGIGQIAKSVFIYLGVPFIAGAITRLVGVKVMGKERYHREFVPRIGPITLIALLFTIVVM FSLKGNLIVQLPLDVVRIAVPLLIYFVAMFFVSFWMGKKLGADYSKTTTLAFTAASNNFELAIAVAVAVFGLNSGAAFAA VIGPLVEVPVMIALVNVAFWFQRRYFSGSSL
Sequences:
>Translated_351_residues MSTGVSPKLSFLDRYLTLWIFLAMFAGVGAGYLFPGVESFINSFQVGTTNIPIAAGLILMMYPPFAKVKYEEMPEVFHNK RVLGLSLVQNWLIGPVLMFILAVAFLPDKPEYMVGLIMIGLARCIAMVIVWNDLAKGNTEYAAGLVAFNSIFQVLFYSVY AWFFITVLPPLIGLSGSIVEVGIGQIAKSVFIYLGVPFIAGAITRLVGVKVMGKERYHREFVPRIGPITLIALLFTIVVM FSLKGNLIVQLPLDVVRIAVPLLIYFVAMFFVSFWMGKKLGADYSKTTTLAFTAASNNFELAIAVAVAVFGLNSGAAFAA VIGPLVEVPVMIALVNVAFWFQRRYFSGSSL >Mature_350_residues STGVSPKLSFLDRYLTLWIFLAMFAGVGAGYLFPGVESFINSFQVGTTNIPIAAGLILMMYPPFAKVKYEEMPEVFHNKR VLGLSLVQNWLIGPVLMFILAVAFLPDKPEYMVGLIMIGLARCIAMVIVWNDLAKGNTEYAAGLVAFNSIFQVLFYSVYA WFFITVLPPLIGLSGSIVEVGIGQIAKSVFIYLGVPFIAGAITRLVGVKVMGKERYHREFVPRIGPITLIALLFTIVVMF SLKGNLIVQLPLDVVRIAVPLLIYFVAMFFVSFWMGKKLGADYSKTTTLAFTAASNNFELAIAVAVAVFGLNSGAAFAAV IGPLVEVPVMIALVNVAFWFQRRYFSGSSL
Specific function: Seems to confer resistance to arsenite by allowing cells to extrude this compound. Could be part of an arsenite extrusion pump [H]
COG id: COG0798
COG function: function code P; Arsenite efflux pump ACR3 and related permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ACR3 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6325459, Length=321, Percent_Identity=35.5140186915888, Blast_Score=174, Evalue=2e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004706 - InterPro: IPR002657 [H]
Pfam domain/function: PF01758 SBF [H]
EC number: NA
Molecular weight: Translated: 38453; Mature: 38321
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTGVSPKLSFLDRYLTLWIFLAMFAGVGAGYLFPGVESFINSFQVGTTNIPIAAGLILM CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHH MYPPFAKVKYEEMPEVFHNKRVLGLSLVQNWLIGPVLMFILAVAFLPDKPEYMVGLIMIG HCCCHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LARCIAMVIVWNDLAKGNTEYAAGLVAFNSIFQVLFYSVYAWFFITVLPPLIGLSGSIVE HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH VGIGQIAKSVFIYLGVPFIAGAITRLVGVKVMGKERYHREFVPRIGPITLIALLFTIVVM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH FSLKGNLIVQLPLDVVRIAVPLLIYFVAMFFVSFWMGKKLGADYSKTTTLAFTAASNNFE HHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCH LAIAVAVAVFGLNSGAAFAAVIGPLVEVPVMIALVNVAFWFQRRYFSGSSL HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure STGVSPKLSFLDRYLTLWIFLAMFAGVGAGYLFPGVESFINSFQVGTTNIPIAAGLILM CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHH MYPPFAKVKYEEMPEVFHNKRVLGLSLVQNWLIGPVLMFILAVAFLPDKPEYMVGLIMIG HCCCHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LARCIAMVIVWNDLAKGNTEYAAGLVAFNSIFQVLFYSVYAWFFITVLPPLIGLSGSIVE HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH VGIGQIAKSVFIYLGVPFIAGAITRLVGVKVMGKERYHREFVPRIGPITLIALLFTIVVM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH FSLKGNLIVQLPLDVVRIAVPLLIYFVAMFFVSFWMGKKLGADYSKTTTLAFTAASNNFE HHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCH LAIAVAVAVFGLNSGAAFAAVIGPLVEVPVMIALVNVAFWFQRRYFSGSSL HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7704261; 8969508; 9384377; 7489895; 9537360 [H]