| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is nadC [H]
Identifier: 197118702
GI number: 197118702
Start: 2694482
End: 2695312
Strand: Reverse
Name: nadC [H]
Synonym: Gbem_2321
Alternate gene names: 197118702
Gene position: 2695312-2694482 (Counterclockwise)
Preceding gene: 197118703
Following gene: 197118701
Centisome position: 58.4
GC content: 62.45
Gene sequence:
>831_bases ATGAACCAAATTGACAAGATAATCGATAACGCCCTCGCCGAAGACATCCACACCGGTGACATAACCACCCTCTCAGTTTT ACGCAAGCCGCGCCAGATGCGCGCCAGATTGGTCGCCAAGGAACCGATGGTCCTGGCGGGGATCGCCGTGGCCGAGCGCG TTTTCTCCCGCATCGACGCCAGTGTCAGCTTCAAGGCGGAGTTCTCCGACGGCGATAGCCTCGCCAAGGGGGACGTCATC GCCCGCATGGAAGGAAACGCCGCCTCGCTTTTGCAGGGGGAGCGGGTCTCTCTGAACCTCTTGCAGCGCATGTGCGGCAT CGCCACCCAGACCGCAGCCTACGTGAAGGAGCTGGAAGGAACCGGCGCCCGCGTCGTCGACACCAGGAAGACCACCCCGG GACTGCGCGTGCTTGAGAAATACTCGGTAAGGGTAGGTGGGGGGACCAACCACCGCACCGGGCTCTACGACGGCGTGCTC ATCAAGGAAAACCACATAGCAGCCGCCGGCGGGATCCTCCAGGCGGTGAGCGCCGCCCGCGCCTACATCGCGCACACCCT CAAGGTCGAGGTGGAGACCGAGAATCTCGACCAGGTGGCGCAAGCGGTTGAGGCCGGCGCCGACATCATCATGCTCGACA ACATGGGACTCGAAGAGATGACGAAGGCCGTCCAGATGATCGGCAAAAGGGCGCTGGTCGAGGCCTCGGGCGGGGTGAAT CTGCAGACCATCAAATCCATCGCCCAGACCGGGGTGGACATCATATCGGTCGGGGCCTTGACCCACTCGGTCAGGGCCAC CGACATCTCCATGCTGATGGAGGAAGTTTGA
Upstream 100 bases:
>100_bases GTGGCGACAGTAGCTTTTATAGCGGAAGTATTAGCGGTTGCGGGGCTAGTTAAGCTGTGCTATAAAAAAATGCCGCTTTT CGAAGGAGATGCCCGATAAC
Downstream 100 bases:
>100_bases AAGAATCCGGAGTAGACGGGAAAATCCTGGAACTGTTCCGCTCCGGAGACGGTGTGGTATCCGGCGCCGCGCTCAGCAAG GCGCTGGGGGTTTCGCGAAC
Product: quinolinate phosphoribosyltransferase (decarboxylating)
Products: NA
Alternate protein names: General stress protein 70; GSP70; Quinolinate phosphoribosyltransferase [decarboxylating]; QAPRTase [H]
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MNQIDKIIDNALAEDIHTGDITTLSVLRKPRQMRARLVAKEPMVLAGIAVAERVFSRIDASVSFKAEFSDGDSLAKGDVI ARMEGNAASLLQGERVSLNLLQRMCGIATQTAAYVKELEGTGARVVDTRKTTPGLRVLEKYSVRVGGGTNHRTGLYDGVL IKENHIAAAGGILQAVSAARAYIAHTLKVEVETENLDQVAQAVEAGADIIMLDNMGLEEMTKAVQMIGKRALVEASGGVN LQTIKSIAQTGVDIISVGALTHSVRATDISMLMEEV
Sequences:
>Translated_276_residues MNQIDKIIDNALAEDIHTGDITTLSVLRKPRQMRARLVAKEPMVLAGIAVAERVFSRIDASVSFKAEFSDGDSLAKGDVI ARMEGNAASLLQGERVSLNLLQRMCGIATQTAAYVKELEGTGARVVDTRKTTPGLRVLEKYSVRVGGGTNHRTGLYDGVL IKENHIAAAGGILQAVSAARAYIAHTLKVEVETENLDQVAQAVEAGADIIMLDNMGLEEMTKAVQMIGKRALVEASGGVN LQTIKSIAQTGVDIISVGALTHSVRATDISMLMEEV >Mature_276_residues MNQIDKIIDNALAEDIHTGDITTLSVLRKPRQMRARLVAKEPMVLAGIAVAERVFSRIDASVSFKAEFSDGDSLAKGDVI ARMEGNAASLLQGERVSLNLLQRMCGIATQTAAYVKELEGTGARVVDTRKTTPGLRVLEKYSVRVGGGTNHRTGLYDGVL IKENHIAAAGGILQAVSAARAYIAHTLKVEVETENLDQVAQAVEAGADIIMLDNMGLEEMTKAVQMIGKRALVEASGGVN LQTIKSIAQTGVDIISVGALTHSVRATDISMLMEEV
Specific function: Involved in the catabolism of quinolinic acid (QA) [H]
COG id: COG0157
COG function: function code H; Nicotinate-nucleotide pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nadC/modD family [H]
Homologues:
Organism=Homo sapiens, GI45269149, Length=270, Percent_Identity=40, Blast_Score=168, Evalue=5e-42, Organism=Escherichia coli, GI1786299, Length=267, Percent_Identity=43.8202247191011, Blast_Score=183, Evalue=1e-47, Organism=Saccharomyces cerevisiae, GI6321162, Length=278, Percent_Identity=35.9712230215827, Blast_Score=159, Evalue=6e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR004393 - InterPro: IPR002638 - InterPro: IPR022412 [H]
Pfam domain/function: PF01729 QRPTase_C; PF02749 QRPTase_N [H]
EC number: =2.4.2.19 [H]
Molecular weight: Translated: 29438; Mature: 29438
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQIDKIIDNALAEDIHTGDITTLSVLRKPRQMRARLVAKEPMVLAGIAVAERVFSRIDA CCHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC SVSFKAEFSDGDSLAKGDVIARMEGNAASLLQGERVSLNLLQRMCGIATQTAAYVKELEG CEEEEEECCCCCCCCCCCEEEEECCCHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHCC TGARVVDTRKTTPGLRVLEKYSVRVGGGTNHRTGLYDGVLIKENHIAAAGGILQAVSAAR CCCEEEECCCCCCHHHHHHHHEEEECCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHH AYIAHTLKVEVETENLDQVAQAVEAGADIIMLDNMGLEEMTKAVQMIGKRALVEASGGVN HHHHHEEEEEEECCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHEEECCCCCC LQTIKSIAQTGVDIISVGALTHSVRATDISMLMEEV HHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MNQIDKIIDNALAEDIHTGDITTLSVLRKPRQMRARLVAKEPMVLAGIAVAERVFSRIDA CCHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC SVSFKAEFSDGDSLAKGDVIARMEGNAASLLQGERVSLNLLQRMCGIATQTAAYVKELEG CEEEEEECCCCCCCCCCCEEEEECCCHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHCC TGARVVDTRKTTPGLRVLEKYSVRVGGGTNHRTGLYDGVLIKENHIAAAGGILQAVSAAR CCCEEEECCCCCCHHHHHHHHEEEECCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHH AYIAHTLKVEVETENLDQVAQAVEAGADIIMLDNMGLEEMTKAVQMIGKRALVEASGGVN HHHHHEEEEEEECCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHEEECCCCCC LQTIKSIAQTGVDIISVGALTHSVRATDISMLMEEV HHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 8444804; 9298659 [H]