| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118697
Identifier: 197118697
GI number: 197118697
Start: 2688214
End: 2689152
Strand: Reverse
Name: 197118697
Synonym: Gbem_2316
Alternate gene names: NA
Gene position: 2689152-2688214 (Counterclockwise)
Preceding gene: 197118698
Following gene: 197118696
Centisome position: 58.27
GC content: 60.81
Gene sequence:
>939_bases GTGTCGGGCAAGGTTACCTTCAGGATCTCGGCGGCGGCAGCCCCGTACGTCGGTGCGGATAAACCCCGGCAGCAGAGGCT AGAGGCTGCTTCGGGCAAGGTGACGCTTCCGCCTGCCGATTTCGTGCTGCTCATCTATTACCTTTGTCATGACCAGGACC CGGAGGTTAAGCGGAGCGCCGTGACGACGCTGCGTGCCCTGGGTGCCGGCTTGCTGAAGCAGGTGTTGGCCGATCCCGAG TTGCATCCGCGCATCCTGGACGCCCTGGTGCAACTGCACGGCAAGAACCCTGACCTGGCTCCCCTCTTTGCCAAGCATCC TAGTCTTTCCAGCACCGCCGCAGCCGCGCTCGGCCTGCAAGAAGGTGCTTCGGCAGCACCTGCCCCGTCCGGCGCGCCGC CGGTCTCCCCGCAGGAGGAGATCGTTCCCCCCCGGCAGATCCGCAGTGAGGATGACGACGTAGCCGACGAGGAAGAGGGT GCGGTGCAACCGGACGAGGACGAGCCGATCGATGAGGAGGAGTACCAGTCCAAGTACCAGATGGCCCAAGGCATGGGGGT CAGCGACAAGATCAAGATCGCTATGACCGGCGATAAGGAATGGCGCTCCATCATGATCAAGGACAACAACAAGCTCGTCT CGTCGGCGGCGATCAAGAACCCGCGCATGACCGAGTCGGAGGTCCTTTCCATTGCCAAGTCGGTGGTGGGAAACGACGAG ATCATGCGGGTAATCTGCACCAACAAGGAATGGATAAAGAACTCGCAGATCAGGAAGGCGCTGGTGATGAACAGCAAAAC GCCGCTGCCCCACGCCCTGCGTTTCGTGGCGACACTCCCCGAAAAGGAACTTGCTCAGTTGGCCAAGAGCAAAAATGTGA ACACGGCCATCTCTTCGCAGGCGCGCAGGATGCTGATGAGCAAGAAAGACAGCAGATAA
Upstream 100 bases:
>100_bases CGGGAGCTTCGCCGATCAGGCCAGCGCCAAGAAGGCGGCTGCCAACCTGAAAAGCGCCGGGCTCTCCGCCACAGTGGTCA AGGTCGGGAAATAGAGCTGC
Downstream 100 bases:
>100_bases ACTAGGGGGAATCCAGATGGCTCTGGTTAACCAGGCAAAACGTGAAATTAATGCGAAGATCGTCTTTTTCGGACCGGCGC AGGCCGGCAAGGCGACCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MSGKVTFRISAAAAPYVGADKPRQQRLEAASGKVTLPPADFVLLIYYLCHDQDPEVKRSAVTTLRALGAGLLKQVLADPE LHPRILDALVQLHGKNPDLAPLFAKHPSLSSTAAAALGLQEGASAAPAPSGAPPVSPQEEIVPPRQIRSEDDDVADEEEG AVQPDEDEPIDEEEYQSKYQMAQGMGVSDKIKIAMTGDKEWRSIMIKDNNKLVSSAAIKNPRMTESEVLSIAKSVVGNDE IMRVICTNKEWIKNSQIRKALVMNSKTPLPHALRFVATLPEKELAQLAKSKNVNTAISSQARRMLMSKKDSR
Sequences:
>Translated_312_residues MSGKVTFRISAAAAPYVGADKPRQQRLEAASGKVTLPPADFVLLIYYLCHDQDPEVKRSAVTTLRALGAGLLKQVLADPE LHPRILDALVQLHGKNPDLAPLFAKHPSLSSTAAAALGLQEGASAAPAPSGAPPVSPQEEIVPPRQIRSEDDDVADEEEG AVQPDEDEPIDEEEYQSKYQMAQGMGVSDKIKIAMTGDKEWRSIMIKDNNKLVSSAAIKNPRMTESEVLSIAKSVVGNDE IMRVICTNKEWIKNSQIRKALVMNSKTPLPHALRFVATLPEKELAQLAKSKNVNTAISSQARRMLMSKKDSR >Mature_311_residues SGKVTFRISAAAAPYVGADKPRQQRLEAASGKVTLPPADFVLLIYYLCHDQDPEVKRSAVTTLRALGAGLLKQVLADPEL HPRILDALVQLHGKNPDLAPLFAKHPSLSSTAAAALGLQEGASAAPAPSGAPPVSPQEEIVPPRQIRSEDDDVADEEEGA VQPDEDEPIDEEEYQSKYQMAQGMGVSDKIKIAMTGDKEWRSIMIKDNNKLVSSAAIKNPRMTESEVLSIAKSVVGNDEI MRVICTNKEWIKNSQIRKALVMNSKTPLPHALRFVATLPEKELAQLAKSKNVNTAISSQARRMLMSKKDSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33948; Mature: 33817
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGKVTFRISAAAAPYVGADKPRQQRLEAASGKVTLPPADFVLLIYYLCHDQDPEVKRSA CCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCEEECCCHHHHHHHHHHHCCCCCHHHHHH VTTLRALGAGLLKQVLADPELHPRILDALVQLHGKNPDLAPLFAKHPSLSSTAAAALGLQ HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHH EGASAAPAPSGAPPVSPQEEIVPPRQIRSEDDDVADEEEGAVQPDEDEPIDEEEYQSKYQ CCCCCCCCCCCCCCCCCHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH MAQGMGVSDKIKIAMTGDKEWRSIMIKDNNKLVSSAAIKNPRMTESEVLSIAKSVVGNDE HHHCCCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCHH IMRVICTNKEWIKNSQIRKALVMNSKTPLPHALRFVATLPEKELAQLAKSKNVNTAISSQ EEEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHH ARRMLMSKKDSR HHHHHHHHCCCC >Mature Secondary Structure SGKVTFRISAAAAPYVGADKPRQQRLEAASGKVTLPPADFVLLIYYLCHDQDPEVKRSA CCEEEEEEECCCCCCCCCCCHHHHHHHHHCCEEECCCHHHHHHHHHHHCCCCCHHHHHH VTTLRALGAGLLKQVLADPELHPRILDALVQLHGKNPDLAPLFAKHPSLSSTAAAALGLQ HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHH EGASAAPAPSGAPPVSPQEEIVPPRQIRSEDDDVADEEEGAVQPDEDEPIDEEEYQSKYQ CCCCCCCCCCCCCCCCCHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH MAQGMGVSDKIKIAMTGDKEWRSIMIKDNNKLVSSAAIKNPRMTESEVLSIAKSVVGNDE HHHCCCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCHH IMRVICTNKEWIKNSQIRKALVMNSKTPLPHALRFVATLPEKELAQLAKSKNVNTAISSQ EEEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHH ARRMLMSKKDSR HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA