Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197118627

Identifier: 197118627

GI number: 197118627

Start: 2614980

End: 2615375

Strand: Reverse

Name: 197118627

Synonym: Gbem_2246

Alternate gene names: NA

Gene position: 2615375-2614980 (Counterclockwise)

Preceding gene: 197118629

Following gene: 197118625

Centisome position: 56.67

GC content: 58.84

Gene sequence:

>396_bases
ATGATCAACGAAGAGATCAGGCATTTCGTAGATAGGGTAGGGCATGCCTTTGTGGCTACTGCCGATGCCGAAGGGAATCC
ACACCTGGCGGCGGGTCGGGGCATCTCCATTATGGAACCGGACAGATTGGTGTTCGAGTCGTGGTTTTGCCAGACCAGCC
TGAAGAATTTGGATGAAAATGCCAGCGTGGCGGTCGTCATCGCCGACCCGGTTACCGGAAACGGGTTTCAGTTCCTGGGG
CGGGTGGAAAAGACGGTGGACACTGCGGTGCTGAATGGCTATGCGCCCGAACTGGAGCCCACCGGTCTCCCCCAAGTACA
GTGGAGGCTGGAGATCCGGGTGGAGAAAGTAATGGTCTTTACGGCCGACGCCCACTCGGACCGCCCCCTGGGGTAG

Upstream 100 bases:

>100_bases
CTGTCTCATGGCCAACAGCGGGCATCCTTCCCGAAGGGTGCCGATTCGGGTCCGGTGGCACCGGAGGCTGGTCCGCATTG
GCAAAAGGAGGTATGTCTAC

Downstream 100 bases:

>100_bases
TGCTTACTTACTTGTTTTATCCTGCAGCATCAATTCCTCTGCTTTAGGCACATCCTCTTCTGCCACCTCTATTTCCTTGG
CGGCGCCTGCCTTTGCATCT

Product: pyridoxamine 5'-phosphate oxidase-like FMN-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MINEEIRHFVDRVGHAFVATADAEGNPHLAAGRGISIMEPDRLVFESWFCQTSLKNLDENASVAVVIADPVTGNGFQFLG
RVEKTVDTAVLNGYAPELEPTGLPQVQWRLEIRVEKVMVFTADAHSDRPLG

Sequences:

>Translated_131_residues
MINEEIRHFVDRVGHAFVATADAEGNPHLAAGRGISIMEPDRLVFESWFCQTSLKNLDENASVAVVIADPVTGNGFQFLG
RVEKTVDTAVLNGYAPELEPTGLPQVQWRLEIRVEKVMVFTADAHSDRPLG
>Mature_131_residues
MINEEIRHFVDRVGHAFVATADAEGNPHLAAGRGISIMEPDRLVFESWFCQTSLKNLDENASVAVVIADPVTGNGFQFLG
RVEKTVDTAVLNGYAPELEPTGLPQVQWRLEIRVEKVMVFTADAHSDRPLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14416; Mature: 14416

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINEEIRHFVDRVGHAFVATADAEGNPHLAAGRGISIMEPDRLVFESWFCQTSLKNLDEN
CCCHHHHHHHHHCCCEEEEEECCCCCCCEECCCCCEEECCCHHHHHHHHHHHHHHCCCCC
ASVAVVIADPVTGNGFQFLGRVEKTVDTAVLNGYAPELEPTGLPQVQWRLEIRVEKVMVF
CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEEEEEEE
TADAHSDRPLG
EECCCCCCCCC
>Mature Secondary Structure
MINEEIRHFVDRVGHAFVATADAEGNPHLAAGRGISIMEPDRLVFESWFCQTSLKNLDEN
CCCHHHHHHHHHCCCEEEEEECCCCCCCEECCCCCEEECCCHHHHHHHHHHHHHHCCCCC
ASVAVVIADPVTGNGFQFLGRVEKTVDTAVLNGYAPELEPTGLPQVQWRLEIRVEKVMVF
CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEEEEEEE
TADAHSDRPLG
EECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA