| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118623
Identifier: 197118623
GI number: 197118623
Start: 2612454
End: 2613395
Strand: Reverse
Name: 197118623
Synonym: Gbem_2242
Alternate gene names: NA
Gene position: 2613395-2612454 (Counterclockwise)
Preceding gene: 197118624
Following gene: 197118619
Centisome position: 56.63
GC content: 62.63
Gene sequence:
>942_bases ATGACACCACAACTGCATAACGTAACCTCTCAACTAGCCCAACTGCACGGCCATGCCTACTTCAGGGTGGACGAAGGCCC TCTCAAGGAGAGCATCGCCCGGATTATCCTTGACGATGTCGAGGAGGACCTGGTCGAGTTACTGTCGGACTCCGCGTTCG GACTCGAAGTGAGCGTCGGCCAGCAGGAAGGGGAGAGTGAGCCGACAGTGAACTACAGTGTCGATCACCCCGGCGTGGTC TACCGGTCGGAGATCGGACTTTCGCGCCTCCCGAGCGAGGCCCTGGAGGACCTGGCGCTGTATCTCGACCGGATGCTGCA GAATGAAGCGCCGGCGCAGGATCAGCCTGCTGCGGGCACCGTGCTGCGCAAAAAGCAGGACCACGACCACCATGAGCAGG ATGCCGCCGCGGCCCGTCTCAAGGTATCGACGCAGTGGCTCAAAAGCGTGGTCCCCTGCACGGACTACAGCTACGAAGAG ATCGACGGCAAAAAGTACATCCGGGAGTACTACTGGTCCCGCGACCTTATCGAGAACCTGGTCCGGATCAAGTCCACGAA AACGACCCCTGAAGACCTGCAGTACGTAGCCAAGGAATGCTGCGACGGAGACTTGGACTGGGCCAAGGATCTGATAGCGC GGTTGAAATCCCCGAACCGCCCGGAACCTGCCCCAAAGGATCAGCCGCAGAAGGGTGGGCAGAAGGGACAAACCCAGGCA AAACAGGGAGGGCAGACCCAGGCGAGAGTCGCAGGGCAGCCCCAGGCAAGACCAGCAGCGCAAGCTCAGGTGAGACAGCC CGGACAAGGCCAGGCGAAGCAGGCCGCTCCCGGAGAACGGGTGCGCAGCCGCTCCAGGAACAGGAGGCCGTTCCGGCAAG GAGGCAAGGACGGCCAACGCAAGCCCGACCAGCCCGCCGGCCCCAAGCCGCCGCAGGCATGA
Upstream 100 bases:
>100_bases GCTTGTGCTAGGGTATGTGGTCGCCGCGTTGATCAACCGGCACATCTGTTGGCACAGACCGAAGTTCAAAATAAAGAATG GCTACAAAAACGGGTAACTC
Downstream 100 bases:
>100_bases TATAGCGAAAAAGGGAGACGCCACAGGCGCCTCCCTTTTTTATTCTCATTCCTCGCCTTTGCGGCGCCGGGGCTTCAGGC CTCAGGCTTGAGAGCGCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MTPQLHNVTSQLAQLHGHAYFRVDEGPLKESIARIILDDVEEDLVELLSDSAFGLEVSVGQQEGESEPTVNYSVDHPGVV YRSEIGLSRLPSEALEDLALYLDRMLQNEAPAQDQPAAGTVLRKKQDHDHHEQDAAAARLKVSTQWLKSVVPCTDYSYEE IDGKKYIREYYWSRDLIENLVRIKSTKTTPEDLQYVAKECCDGDLDWAKDLIARLKSPNRPEPAPKDQPQKGGQKGQTQA KQGGQTQARVAGQPQARPAAQAQVRQPGQGQAKQAAPGERVRSRSRNRRPFRQGGKDGQRKPDQPAGPKPPQA
Sequences:
>Translated_313_residues MTPQLHNVTSQLAQLHGHAYFRVDEGPLKESIARIILDDVEEDLVELLSDSAFGLEVSVGQQEGESEPTVNYSVDHPGVV YRSEIGLSRLPSEALEDLALYLDRMLQNEAPAQDQPAAGTVLRKKQDHDHHEQDAAAARLKVSTQWLKSVVPCTDYSYEE IDGKKYIREYYWSRDLIENLVRIKSTKTTPEDLQYVAKECCDGDLDWAKDLIARLKSPNRPEPAPKDQPQKGGQKGQTQA KQGGQTQARVAGQPQARPAAQAQVRQPGQGQAKQAAPGERVRSRSRNRRPFRQGGKDGQRKPDQPAGPKPPQA >Mature_312_residues TPQLHNVTSQLAQLHGHAYFRVDEGPLKESIARIILDDVEEDLVELLSDSAFGLEVSVGQQEGESEPTVNYSVDHPGVVY RSEIGLSRLPSEALEDLALYLDRMLQNEAPAQDQPAAGTVLRKKQDHDHHEQDAAAARLKVSTQWLKSVVPCTDYSYEEI DGKKYIREYYWSRDLIENLVRIKSTKTTPEDLQYVAKECCDGDLDWAKDLIARLKSPNRPEPAPKDQPQKGGQKGQTQAK QGGQTQARVAGQPQARPAAQAQVRQPGQGQAKQAAPGERVRSRSRNRRPFRQGGKDGQRKPDQPAGPKPPQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34796; Mature: 34665
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPQLHNVTSQLAQLHGHAYFRVDEGPLKESIARIILDDVEEDLVELLSDSAFGLEVSVG CCCHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC QQEGESEPTVNYSVDHPGVVYRSEIGLSRLPSEALEDLALYLDRMLQNEAPAQDQPAAGT CCCCCCCCCEEEECCCCCEEEEHHCCHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHH VLRKKQDHDHHEQDAAAARLKVSTQWLKSVVPCTDYSYEEIDGKKYIREYYWSRDLIENL HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH VRIKSTKTTPEDLQYVAKECCDGDLDWAKDLIARLKSPNRPEPAPKDQPQKGGQKGQTQA HHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH KQGGQTQARVAGQPQARPAAQAQVRQPGQGQAKQAAPGERVRSRSRNRRPFRQGGKDGQR HHCCCCHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHCCCCCCC KPDQPAGPKPPQA CCCCCCCCCCCCC >Mature Secondary Structure TPQLHNVTSQLAQLHGHAYFRVDEGPLKESIARIILDDVEEDLVELLSDSAFGLEVSVG CCHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC QQEGESEPTVNYSVDHPGVVYRSEIGLSRLPSEALEDLALYLDRMLQNEAPAQDQPAAGT CCCCCCCCCEEEECCCCCEEEEHHCCHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHH VLRKKQDHDHHEQDAAAARLKVSTQWLKSVVPCTDYSYEEIDGKKYIREYYWSRDLIENL HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH VRIKSTKTTPEDLQYVAKECCDGDLDWAKDLIARLKSPNRPEPAPKDQPQKGGQKGQTQA HHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH KQGGQTQARVAGQPQARPAAQAQVRQPGQGQAKQAAPGERVRSRSRNRRPFRQGGKDGQR HHCCCCHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHCCCCCCC KPDQPAGPKPPQA CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA