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The map label for this gene is sodA [H]

Identifier: 197118585

GI number: 197118585

Start: 2564278

End: 2564862

Strand: Direct

Name: sodA [H]

Synonym: Gbem_2204

Alternate gene names: 197118585

Gene position: 2564278-2564862 (Clockwise)

Preceding gene: 197118578

Following gene: 197118588

Centisome position: 55.56

GC content: 59.83

Gene sequence:

>585_bases
ATGACAGCGTTCACGGCAAAGGACTACTCGAGGCTGATAGGGATGCCTGGGTTCAGCGAGACACTCCTCAACAACCATTT
CACCCTTTACCAGGGGTACGTAAAGAACACCAACACCCTCGACGACGCCCTGACGGAGCTGCGCAAGTCCGGCAAGGGGA
GCGACCCCGGCTTCGCCGAGCTCAAGCGCCGCTTCGGCTGGGAGTTCAACGGCATGAGGCTGCACGAGTACTACTTCGAG
AACCTGGGCGGGAATCAGCCGATAAACCAGGACGGGAGGCTCGCCTCCAGGATCCACCAGGATTTCGGCGGGTTCGACGA
GTGGGTACAGGACTTCAAGTCGGTCGGGGCCATGCGCGGCATAGGCTGGGCCATCATGTACCAGGACCTCAGCAACGGCA
GGCTGCTCAACTTCTGGATCAACGAGCATGACGCCGGCCATCCTGCCGGGTGCACCCCGGTCCTGATCATGGACGTCTTC
GAACATGCCTTCATGACCGATTACGGCCTGAAGCGCGCCGACTACATCAACGCTTTCTTTCAGAACATCGACTGGAACAG
CGCGGAGCAGCGGTTGCAGATGTGA

Upstream 100 bases:

>100_bases
GGCCCTGAAGTATTTGACATCACTAACCTTGCGGTTACACTTGGTCGGTATTTTTCTACAGGGCTGTTTGGGGCAAAATA
TCTTGTAAAAGGAGAGAGTT

Downstream 100 bases:

>100_bases
TCCCTGCTGCCAAAGTGTCCACAAAAAAGGCCTCCCGGAAGGGGGGCCTTTTTCGTCTCCGCCGCATCGGTGTGCTAACC
GAGCACAAGGCGCCGTGGGT

Product: superoxide dismutase, iron/manganese-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MTAFTAKDYSRLIGMPGFSETLLNNHFTLYQGYVKNTNTLDDALTELRKSGKGSDPGFAELKRRFGWEFNGMRLHEYYFE
NLGGNQPINQDGRLASRIHQDFGGFDEWVQDFKSVGAMRGIGWAIMYQDLSNGRLLNFWINEHDAGHPAGCTPVLIMDVF
EHAFMTDYGLKRADYINAFFQNIDWNSAEQRLQM

Sequences:

>Translated_194_residues
MTAFTAKDYSRLIGMPGFSETLLNNHFTLYQGYVKNTNTLDDALTELRKSGKGSDPGFAELKRRFGWEFNGMRLHEYYFE
NLGGNQPINQDGRLASRIHQDFGGFDEWVQDFKSVGAMRGIGWAIMYQDLSNGRLLNFWINEHDAGHPAGCTPVLIMDVF
EHAFMTDYGLKRADYINAFFQNIDWNSAEQRLQM
>Mature_193_residues
TAFTAKDYSRLIGMPGFSETLLNNHFTLYQGYVKNTNTLDDALTELRKSGKGSDPGFAELKRRFGWEFNGMRLHEYYFEN
LGGNQPINQDGRLASRIHQDFGGFDEWVQDFKSVGAMRGIGWAIMYQDLSNGRLLNFWINEHDAGHPAGCTPVLIMDVFE
HAFMTDYGLKRADYINAFFQNIDWNSAEQRLQM

Specific function: Destroys radicals which are normally produced within the cells and which are toxic to biological systems [H]

COG id: COG0605

COG function: function code P; Superoxide dismutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iron/manganese superoxide dismutase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6321796, Length=179, Percent_Identity=29.0502793296089, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: 2020 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 900 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001189
- InterPro:   IPR019832
- InterPro:   IPR019831 [H]

Pfam domain/function: PF02777 Sod_Fe_C [H]

EC number: =1.15.1.1 [H]

Molecular weight: Translated: 22301; Mature: 22170

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAFTAKDYSRLIGMPGFSETLLNNHFTLYQGYVKNTNTLDDALTELRKSGKGSDPGFAE
CCCCCHHHHHHHHCCCCHHHHHHCCCHHEEECHHCCCCCHHHHHHHHHHCCCCCCCCHHH
LKRRFGWEFNGMRLHEYYFENLGGNQPINQDGRLASRIHQDFGGFDEWVQDFKSVGAMRG
HHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
IGWAIMYQDLSNGRLLNFWINEHDAGHPAGCTPVLIMDVFEHAFMTDYGLKRADYINAFF
CCHHEEEEECCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH
QNIDWNSAEQRLQM
HCCCCCCHHHHHCC
>Mature Secondary Structure 
TAFTAKDYSRLIGMPGFSETLLNNHFTLYQGYVKNTNTLDDALTELRKSGKGSDPGFAE
CCCCHHHHHHHHCCCCHHHHHHCCCHHEEECHHCCCCCHHHHHHHHHHCCCCCCCCHHH
LKRRFGWEFNGMRLHEYYFENLGGNQPINQDGRLASRIHQDFGGFDEWVQDFKSVGAMRG
HHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
IGWAIMYQDLSNGRLLNFWINEHDAGHPAGCTPVLIMDVFEHAFMTDYGLKRADYINAFF
CCHHEEEEECCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH
QNIDWNSAEQRLQM
HCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471500; 2180932 [H]