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The map label for this gene is ybjZ [C]

Identifier: 197118549

GI number: 197118549

Start: 2525788

End: 2526948

Strand: Reverse

Name: ybjZ [C]

Synonym: Gbem_2168

Alternate gene names: 197118549

Gene position: 2526948-2525788 (Counterclockwise)

Preceding gene: 197118550

Following gene: 197118548

Centisome position: 54.75

GC content: 61.58

Gene sequence:

>1161_bases
ATGAAACTGCACACGATATCAATCAACAATCTGAAGCGCCGCAAGGCAAAGATGGCCTTTCTCACCATCGGCCTCATGGT
CGGGATCGCCACCATCGTCACCCTGGTGACCCTCACCAGGTCGATGTCCACGGACATCGAGCGCAAAATGGACGAGTTCG
GCGCCAACATCCTGGTCACTCCCCAGAGTAACGGCCTCTCCATGAACTACGGCGGCATCAGCCTGGGCGGGGTTACCTTC
GACCAGCGCGAGATCAAGGAAGAGGACCTGGCGCAGATCCGCACCATCAAGAACCATAAGAACATCTCGGCCATCTCTCC
CAAGGTCCTGGGCGGAGTCAAGATCGGCAGTCACGACGTGCTGCTGGTCGGCGTGGACTTCGCCAGCGAACTGAAGATGA
AACAGTGGTGGCAGATCTTCGGCAACGCCCCCAAGGGGGACCACGAGCTTCTCCTGGGTAGCGACGCCTCCAACGTCCTC
AACGCCAGCTCGGGCGACAGCATCCAGATCAAGGGCGAAACCTTCAAGGTCGCCGGCGTACTGAACCAGACCGGCTCGCA
GGACGACTCGCTGGTCTTCGCCTCGCTCCCCAAGGCACAGAAACTCCTGGGCAAAGAAGGAAAGATCACCATGGCCGAGG
TGGCTGCGCTTTGCTCGGGCTGCCCCATCGGCGACATGGTGACCCAGATCGCCGAGAAGCTCCCCGATACCAAAGTCTCC
GCCATCCAGCAGGTGGTCGAAGGGCGGCTGAAGGCGCTGGACCACTTCAAGCGCTTCTCCTACGCCATGGCCGCGGTCGT
CGTCTTCATCGGCTCGCTCATCGTCTTCGTCACCATGATGGGCAGCGTCAACGAGCGCACCACCGAGATCGGCGTCTTCC
GTGCCATCGGTTTCCGCAAGAGCCACATCATGCGCATCATCCTCCTGGAGGCAGCACTGGTAAGCCTCCTGGCAGGGCTC
TTAGGCTACGCCGCAGGGATGGGCGGGGCGAAGCTGGCGCTCCCCTTCATGGCGGAAACCAAGAACGCGCAGTTGGTCTG
GGACAGCACTGTCGCCTTCGGCTCGGTCGGCCTGGCCATCCTGCTCGGCCTCGTGGCGAGCCTTTACCCTGCGCTGCACG
CCAGCAAGATGGATCCGACCGAGGCCCTCAGGGCTCTTTAA

Upstream 100 bases:

>100_bases
AACTCTCCCTCGCCCTATGGGAGAGGGTCGGGGTGAGGGAGCTTGAAGCCTGAGAAGGCAGGGACGGGGAACCATTTAAC
ATCCGTTACACGGAGACACG

Downstream 100 bases:

>100_bases
AAAGAGGAAAATATGGCACTCATTGAGATCAAGGATGTGAAGAAGCAGTATCAGACCGGGTCGGACATGGTCGAGGCCCT
GCGCGGCGTGGACATCAGCA

Product: ABC transporter membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MKLHTISINNLKRRKAKMAFLTIGLMVGIATIVTLVTLTRSMSTDIERKMDEFGANILVTPQSNGLSMNYGGISLGGVTF
DQREIKEEDLAQIRTIKNHKNISAISPKVLGGVKIGSHDVLLVGVDFASELKMKQWWQIFGNAPKGDHELLLGSDASNVL
NASSGDSIQIKGETFKVAGVLNQTGSQDDSLVFASLPKAQKLLGKEGKITMAEVAALCSGCPIGDMVTQIAEKLPDTKVS
AIQQVVEGRLKALDHFKRFSYAMAAVVVFIGSLIVFVTMMGSVNERTTEIGVFRAIGFRKSHIMRIILLEAALVSLLAGL
LGYAAGMGGAKLALPFMAETKNAQLVWDSTVAFGSVGLAILLGLVASLYPALHASKMDPTEALRAL

Sequences:

>Translated_386_residues
MKLHTISINNLKRRKAKMAFLTIGLMVGIATIVTLVTLTRSMSTDIERKMDEFGANILVTPQSNGLSMNYGGISLGGVTF
DQREIKEEDLAQIRTIKNHKNISAISPKVLGGVKIGSHDVLLVGVDFASELKMKQWWQIFGNAPKGDHELLLGSDASNVL
NASSGDSIQIKGETFKVAGVLNQTGSQDDSLVFASLPKAQKLLGKEGKITMAEVAALCSGCPIGDMVTQIAEKLPDTKVS
AIQQVVEGRLKALDHFKRFSYAMAAVVVFIGSLIVFVTMMGSVNERTTEIGVFRAIGFRKSHIMRIILLEAALVSLLAGL
LGYAAGMGGAKLALPFMAETKNAQLVWDSTVAFGSVGLAILLGLVASLYPALHASKMDPTEALRAL
>Mature_386_residues
MKLHTISINNLKRRKAKMAFLTIGLMVGIATIVTLVTLTRSMSTDIERKMDEFGANILVTPQSNGLSMNYGGISLGGVTF
DQREIKEEDLAQIRTIKNHKNISAISPKVLGGVKIGSHDVLLVGVDFASELKMKQWWQIFGNAPKGDHELLLGSDASNVL
NASSGDSIQIKGETFKVAGVLNQTGSQDDSLVFASLPKAQKLLGKEGKITMAEVAALCSGCPIGDMVTQIAEKLPDTKVS
AIQQVVEGRLKALDHFKRFSYAMAAVVVFIGSLIVFVTMMGSVNERTTEIGVFRAIGFRKSHIMRIILLEAALVSLLAGL
LGYAAGMGGAKLALPFMAETKNAQLVWDSTVAFGSVGLAILLGLVASLYPALHASKMDPTEALRAL

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 41288; Mature: 41288

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLHTISINNLKRRKAKMAFLTIGLMVGIATIVTLVTLTRSMSTDIERKMDEFGANILVT
CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
PQSNGLSMNYGGISLGGVTFDQREIKEEDLAQIRTIKNHKNISAISPKVLGGVKIGSHDV
ECCCCCEECCCCEEECCCCCCHHHHCHHHHHHHHHHHCCCCCCCCCHHHHCCEEECCCCE
LLVGVDFASELKMKQWWQIFGNAPKGDHELLLGSDASNVLNASSGDSIQIKGETFKVAGV
EEEECCCHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHCCCCCCCEEEEECCEEEEEEE
LNQTGSQDDSLVFASLPKAQKLLGKEGKITMAEVAALCSGCPIGDMVTQIAEKLPDTKVS
HHCCCCCCCCEEEECCCHHHHHHCCCCCEEHHHHHHHHCCCCHHHHHHHHHHHCCCHHHH
AIQQVVEGRLKALDHFKRFSYAMAAVVVFIGSLIVFVTMMGSVNERTTEIGVFRAIGFRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCH
SHIMRIILLEAALVSLLAGLLGYAAGMGGAKLALPFMAETKNAQLVWDSTVAFGSVGLAI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHCCCCCCEEEEECHHHHHHHHHHH
LLGLVASLYPALHASKMDPTEALRAL
HHHHHHHHHHHHHCCCCCHHHHHHCC
>Mature Secondary Structure
MKLHTISINNLKRRKAKMAFLTIGLMVGIATIVTLVTLTRSMSTDIERKMDEFGANILVT
CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
PQSNGLSMNYGGISLGGVTFDQREIKEEDLAQIRTIKNHKNISAISPKVLGGVKIGSHDV
ECCCCCEECCCCEEECCCCCCHHHHCHHHHHHHHHHHCCCCCCCCCHHHHCCEEECCCCE
LLVGVDFASELKMKQWWQIFGNAPKGDHELLLGSDASNVLNASSGDSIQIKGETFKVAGV
EEEECCCHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHCCCCCCCEEEEECCEEEEEEE
LNQTGSQDDSLVFASLPKAQKLLGKEGKITMAEVAALCSGCPIGDMVTQIAEKLPDTKVS
HHCCCCCCCCEEEECCCHHHHHHCCCCCEEHHHHHHHHCCCCHHHHHHHHHHHCCCHHHH
AIQQVVEGRLKALDHFKRFSYAMAAVVVFIGSLIVFVTMMGSVNERTTEIGVFRAIGFRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCH
SHIMRIILLEAALVSLLAGLLGYAAGMGGAKLALPFMAETKNAQLVWDSTVAFGSVGLAI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHCCCCCCEEEEECHHHHHHHHHHH
LLGLVASLYPALHASKMDPTEALRAL
HHHHHHHHHHHHHCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]