| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is ybjG [H]
Identifier: 197118533
GI number: 197118533
Start: 2503981
End: 2504583
Strand: Reverse
Name: ybjG [H]
Synonym: Gbem_2151
Alternate gene names: 197118533
Gene position: 2504583-2503981 (Counterclockwise)
Preceding gene: 197118534
Following gene: 197118528
Centisome position: 54.27
GC content: 59.54
Gene sequence:
>603_bases ATGAACGAAATCGAAGCCTTAAACCGCACTTTATTCCTGCACATTAACGGCGGCAACTATACCCCAGCTTGGTTGGTGCA AGCCTCCATCGGCATGGCCGATTACCTGATCGACCTGATTCCGCTGCTGCTGCTTGGTCTTTGGCTGCAGGGTGATTATG CACGACGAAACCTGGCGATCAAGTCGTGTCTGATTGCCTTGCTGGGTGTCGCGGCAAACCAGATCGTCGGTGTGGTCTGG CCCCACCCGCGCCCCTTCATGATCGGACTCGGTCATGCCTGGATTCAGCACGCGGCCGACCCGTCGTTCCCGAGCGATCA CATGACCGTGTTTGCCGGGGTCGGACTGACCCTGCTGTTGGATGGCGCGGGCGAATGGGGTATCGCTACGATGCTGACGG GGCTGTGCGTGGCCTGGGCGCGGGTGTTCCTGGGCGTGCATTTTCCGCTCGATATGGTAGGTGCAGTCGGTGTCGCGGCC TGTACCTATAGCATCGTGTCGCCGCTTTGGCGTGTCTTGGGTGCATCCATAACCAGTATGACCGAGCGCCTGTATCGATA CCTGCTGGCCCGCCCGATTGCGATGGGCTGGATACGCAACTGA
Upstream 100 bases:
>100_bases AACTTTGTACCGTTGGGTTCCCGCATCAATCGCATACCTGATCCTGGTGCACTTGCCAAAGCCATTGCCCAACCTAAATC CTATTGGACACCGAGAAACA
Downstream 100 bases:
>100_bases GCGCGAGCAATGATAGATGGTAACAGGGTTTCCGGGAAGGGCGAAGATAGGCCTACCCTTCGGTGCGCGAAGGCCAACGG GATGGGGTTCGACATGGCCG
Product: undecaprenyl diphosphate phosphatase
Products: NA
Alternate protein names: Undecaprenyl pyrophosphate phosphatase [H]
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MNEIEALNRTLFLHINGGNYTPAWLVQASIGMADYLIDLIPLLLLGLWLQGDYARRNLAIKSCLIALLGVAANQIVGVVW PHPRPFMIGLGHAWIQHAADPSFPSDHMTVFAGVGLTLLLDGAGEWGIATMLTGLCVAWARVFLGVHFPLDMVGAVGVAA CTYSIVSPLWRVLGASITSMTERLYRYLLARPIAMGWIRN
Sequences:
>Translated_200_residues MNEIEALNRTLFLHINGGNYTPAWLVQASIGMADYLIDLIPLLLLGLWLQGDYARRNLAIKSCLIALLGVAANQIVGVVW PHPRPFMIGLGHAWIQHAADPSFPSDHMTVFAGVGLTLLLDGAGEWGIATMLTGLCVAWARVFLGVHFPLDMVGAVGVAA CTYSIVSPLWRVLGASITSMTERLYRYLLARPIAMGWIRN >Mature_200_residues MNEIEALNRTLFLHINGGNYTPAWLVQASIGMADYLIDLIPLLLLGLWLQGDYARRNLAIKSCLIALLGVAANQIVGVVW PHPRPFMIGLGHAWIQHAADPSFPSDHMTVFAGVGLTLLLDGAGEWGIATMLTGLCVAWARVFLGVHFPLDMVGAVGVAA CTYSIVSPLWRVLGASITSMTERLYRYLLARPIAMGWIRN
Specific function: Overexpression leads to increased undecaprenyl diphosphatase activity and to increased resistance to bacitracin. May have a preferred substrate other than undecaprenyl diphosphate in vivo [H]
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BcrC/YbjG family [H]
Homologues:
Organism=Escherichia coli, GI1787064, Length=199, Percent_Identity=36.1809045226131, Blast_Score=124, Evalue=3e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016118 - InterPro: IPR000326 [H]
Pfam domain/function: PF01569 PAP2 [H]
EC number: =3.6.1.27 [H]
Molecular weight: Translated: 21808; Mature: 21808
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEIEALNRTLFLHINGGNYTPAWLVQASIGMADYLIDLIPLLLLGLWLQGDYARRNLAI CCCHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH KSCLIALLGVAANQIVGVVWPHPRPFMIGLGHAWIQHAADPSFPSDHMTVFAGVGLTLLL HHHHHHHHHHHHHHEEEEECCCCCCEEEECCHHHHHHCCCCCCCCCHHHHHHCCCEEEEE DGAGEWGIATMLTGLCVAWARVFLGVHFPLDMVGAVGVAACTYSIVSPLWRVLGASITSM ECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TERLYRYLLARPIAMGWIRN HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNEIEALNRTLFLHINGGNYTPAWLVQASIGMADYLIDLIPLLLLGLWLQGDYARRNLAI CCCHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH KSCLIALLGVAANQIVGVVWPHPRPFMIGLGHAWIQHAADPSFPSDHMTVFAGVGLTLLL HHHHHHHHHHHHHHEEEEECCCCCCEEEECCHHHHHHCCCCCCCCCHHHHHHCCCEEEEE DGAGEWGIATMLTGLCVAWARVFLGVHFPLDMVGAVGVAACTYSIVSPLWRVLGASITSM ECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TERLYRYLLARPIAMGWIRN HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503 [H]