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The map label for this gene is bphB [H]

Identifier: 197118511

GI number: 197118511

Start: 2476712

End: 2477560

Strand: Direct

Name: bphB [H]

Synonym: Gbem_2129

Alternate gene names: 197118511

Gene position: 2476712-2477560 (Clockwise)

Preceding gene: 197118510

Following gene: 197118514

Centisome position: 53.66

GC content: 62.66

Gene sequence:

>849_bases
TTGAAGAAGCAGGAAGGAGAAATTCAGGAATTGGCGTGCGTGCAGGGACAACAATCGGCCCTGGCGAGCGATCAGGAAAG
CCGCCTCGCCCTCTGCCAGGCAAAGCTTGCCGAAACCGAAGCCCTTTTGAAACAAGAACAGCAGGGGCGCTGCAAGGCGG
AGCGGGAGGTCGCCCTTCTTGCCCAGGAGCTGGAAAGCTTCAGCTATTCCGTCTCCCACGACCTGCGCGCGCCGCTTAGG
CACCTCGTCGGTTTCAGCAGCGCCCTCGTCGAGGACTACAACGAACAACTGGAGCCGACCGCGCAGAGCTACCTGGACTG
CATCACCAGGTCTGCGCGCAAGATGGAGGACCTTCTCGAAGCGCTTCTCTTTCTCTCCCGGGTGACCAAACAGGATCTGA
CTCTCGTCGAAGTGGACCTGGCCGCGCTGGCGCGCCAATACGCGGGGTCTTTGCAGCAGGCCGCCCCCGCGAGGCAGGTA
GAGTTCAGGATAGCGGAGGAACTGCCGGTCAAGGCAGACCCCCAGCTGATGAGGACGGTTATCGAGCAGTTGCTGGGGAA
CGCCTGGAAATTCACGGCCAAAAAGGAAAGGGCGACAGTCGAGTTCGGAGAAAAGAAGGAAGGGGACAGTACCGTCTACT
ACATCCGCGACGACGGGGCGGGGTTCGACCTGCGCTTCGCCCAGCGGCTCTTCGCTCCGTTTCAGCGCATGCACCGCGAG
GAAGAGTTCCCCGGCCTCGGGATAGGGCTCGCCACGGCGCAGCGCATCGTGCACCGCCATGGCGGGAGGATCTGGGCCGA
GGCCGAGGTCGGCAACGGCGCGACTATCTGCTTCACCCTCTGCCCCTGA

Upstream 100 bases:

>100_bases
ATTAGATGTCTCTGGCTAAAGTAAGTCCGGAGAGGTCAATGCCGAAGTGTTGAACGTTTTGACAACATGAATGACGCATT
GTCGCTGAAGGGGGGACGGT

Downstream 100 bases:

>100_bases
GTCAGGCCGGCGCCGGCAGCCCCTGCATCCCGCCGAACTGGATCTGGAAGGAGTCGAGCCTCAGCTTCATCGCGCCCCTC
GTGATGCTTTCCGCGAGGAT

Product: sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MKKQEGEIQELACVQGQQSALASDQESRLALCQAKLAETEALLKQEQQGRCKAEREVALLAQELESFSYSVSHDLRAPLR
HLVGFSSALVEDYNEQLEPTAQSYLDCITRSARKMEDLLEALLFLSRVTKQDLTLVEVDLAALARQYAGSLQQAAPARQV
EFRIAEELPVKADPQLMRTVIEQLLGNAWKFTAKKERATVEFGEKKEGDSTVYYIRDDGAGFDLRFAQRLFAPFQRMHRE
EEFPGLGIGLATAQRIVHRHGGRIWAEAEVGNGATICFTLCP

Sequences:

>Translated_282_residues
MKKQEGEIQELACVQGQQSALASDQESRLALCQAKLAETEALLKQEQQGRCKAEREVALLAQELESFSYSVSHDLRAPLR
HLVGFSSALVEDYNEQLEPTAQSYLDCITRSARKMEDLLEALLFLSRVTKQDLTLVEVDLAALARQYAGSLQQAAPARQV
EFRIAEELPVKADPQLMRTVIEQLLGNAWKFTAKKERATVEFGEKKEGDSTVYYIRDDGAGFDLRFAQRLFAPFQRMHRE
EEFPGLGIGLATAQRIVHRHGGRIWAEAEVGNGATICFTLCP
>Mature_282_residues
MKKQEGEIQELACVQGQQSALASDQESRLALCQAKLAETEALLKQEQQGRCKAEREVALLAQELESFSYSVSHDLRAPLR
HLVGFSSALVEDYNEQLEPTAQSYLDCITRSARKMEDLLEALLFLSRVTKQDLTLVEVDLAALARQYAGSLQQAAPARQV
EFRIAEELPVKADPQLMRTVIEQLLGNAWKFTAKKERATVEFGEKKEGDSTVYYIRDDGAGFDLRFAQRLFAPFQRMHRE
EEFPGLGIGLATAQRIVHRHGGRIWAEAEVGNGATICFTLCP

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=240, Percent_Identity=27.0833333333333, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI48994928, Length=224, Percent_Identity=26.3392857142857, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1786912, Length=261, Percent_Identity=28.735632183908, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1789149, Length=240, Percent_Identity=27.5, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI87081816, Length=271, Percent_Identity=25.0922509225092, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1786600, Length=222, Percent_Identity=28.8288288288288, Blast_Score=68, Evalue=8e-13,
Organism=Escherichia coli, GI145693157, Length=222, Percent_Identity=23.8738738738739, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1788713, Length=258, Percent_Identity=22.4806201550388, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1790436, Length=220, Percent_Identity=25.9090909090909, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1787894, Length=217, Percent_Identity=26.7281105990783, Blast_Score=61, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR013654
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF00512 HisKA; PF08446 PAS_2; PF00360 Phytochrome [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 31588; Mature: 31588

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKQEGEIQELACVQGQQSALASDQESRLALCQAKLAETEALLKQEQQGRCKAEREVALL
CCCCCCHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
AQELESFSYSVSHDLRAPLRHLVGFSSALVEDYNEQLEPTAQSYLDCITRSARKMEDLLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
ALLFLSRVTKQDLTLVEVDLAALARQYAGSLQQAAPARQVEFRIAEELPVKADPQLMRTV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHH
IEQLLGNAWKFTAKKERATVEFGEKKEGDSTVYYIRDDGAGFDLRFAQRLFAPFQRMHRE
HHHHHCCCEECCCHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
EEFPGLGIGLATAQRIVHRHGGRIWAEAEVGNGATICFTLCP
HCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECC
>Mature Secondary Structure
MKKQEGEIQELACVQGQQSALASDQESRLALCQAKLAETEALLKQEQQGRCKAEREVALL
CCCCCCHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
AQELESFSYSVSHDLRAPLRHLVGFSSALVEDYNEQLEPTAQSYLDCITRSARKMEDLLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
ALLFLSRVTKQDLTLVEVDLAALARQYAGSLQQAAPARQVEFRIAEELPVKADPQLMRTV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHH
IEQLLGNAWKFTAKKERATVEFGEKKEGDSTVYYIRDDGAGFDLRFAQRLFAPFQRMHRE
HHHHHCCCEECCCHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
EEFPGLGIGLATAQRIVHRHGGRIWAEAEVGNGATICFTLCP
HCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]