Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197118505

Identifier: 197118505

GI number: 197118505

Start: 2467012

End: 2468364

Strand: Direct

Name: 197118505

Synonym: Gbem_2123

Alternate gene names: NA

Gene position: 2467012-2468364 (Clockwise)

Preceding gene: 197118504

Following gene: 197118507

Centisome position: 53.45

GC content: 67.41

Gene sequence:

>1353_bases
ATGCCGAATTCTGAGCCGCTTTGCCTGGTCATCATCCCCTACGAAAAGAAAAAGGACGCCGCCGGCAAGGTGGTCGATTA
CGAGACGGTGTTCCGCAGGCTGATCGTGCCTGCCGTGGAGGCAGCCGGGCTCTTGCCTGTGCGCGCCGACGAGCAGAGGA
CCGGATGCCTCAACCTCAGGCAGCCGCTGGAGCGGCTGAGGTATTGCGACTGCGCCCTGGCCGACCTCTCCACCGGCGAC
CCCAGGGTCTTGTACCAGCTGGGGATCAGGCAGGCTGTGCATCCGGTCCGGACGCTTCTGGTCTACGCGGCAGGTTGCGC
CCAGCTCCCGCTGGAGGCAGAGGGGCTCCCGGCGGTCCCCTACCGCGTGTCGCCGCACGGCCAGCCGATGCACGAGGCGA
AATACCGCGCTCTCTTGACGGAGCGTCTGGCGGAGGCGATGGAAGGCGCTGCGGAAAGCGAGGTGTACCGCGCCCTGCGT
GGGGGAAGCGGAGAGCAGGCGGCAAAAAAGGAGAGGATAGCCGGGCGGGAGCTTCACGCCACCGTCTTTGCCAACCTGCT
TAAAAAGGGGCGGGCCGGGGGGCTTGCCGCGCTGCGCGAATTGCAGTCGGAGCTCTCCGTTCACTCCGAGGCCGACCCGG
CGGACCTGGTCGAACTCCTGCTCAGCTATCGCGCGCTGAACGGCTGGAGCGAGATCATCGAGCTGGCAAGGCAGATGCCC
CCCGCCCTGGCGGACAGCGTCCTGGTGCAGCAGCAGTTGGGGCTTGCCTTGAACTGGGCCGGAGAGGGGGAGCATGCGGA
ACAGGTGCTGCGTCAGCTCATCGCACGGCGCGGGCCTAGCAGCGACAGCTACGGCATCCTGGGGCGGATAATGAAGGACC
GCTGGGAACAGGCGCTTACGCGGGGCGAGATGGAGCTTGCCAGGGAATTGCTGCAAAAAGCCGCCTCGGCATATCTGAAA
GGGTTCGAGGCGGACTGGCGCAGCACCTATCCCGGAGTAAATGCGGTAACACTCATGGAGCTGAAGGAGCCGGCGGACCC
GCGCCGCCGCGAAATCCTCCCGGTGGTGCACTACGCTGTGGAGCAGCGCATCCGCTCTGGCGCCGCCGATTACTGGGACT
ACGCAACGCTGTTAGAGCTGGCCGCTTTGTCCTGCGACGAAGCGAAGGGGAGGGATGCCCTGGGGCGCAGCCTCGCCATG
GTGCGCGAGGCGTGGGAGCCGGAGACGACGGCACGCGACCTGCGGCTGATCCGGGAAGCGCGCCAGCGCCGCGGGGCGGA
GTGCCCGGCCTGGGCCGAGTACGCCGAGTCCGAATTGCTGAAGGCGGCCGAGCGCGGCACGGCGCGCCCCTGA

Upstream 100 bases:

>100_bases
CTGGTCGGCAGTTTCGGCTGCGACGAGGTGCAGGGAGATCTGATCAGCAGGCCGCTTCCCCCGCACGAGTTCGAACGCCT
GTTGGTGGAGGGAGGGGTTC

Downstream 100 bases:

>100_bases
CGGCTTAGAGCTTGCCGAAGGCCCGCAGGAACTGCGGCAGCAGCAAGGGGGCGTCCGAGTTGATGGCTCCCCCGAGGAAA
TCCATGATGCCGGGGCGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 450; Mature: 449

Protein sequence:

>450_residues
MPNSEPLCLVIIPYEKKKDAAGKVVDYETVFRRLIVPAVEAAGLLPVRADEQRTGCLNLRQPLERLRYCDCALADLSTGD
PRVLYQLGIRQAVHPVRTLLVYAAGCAQLPLEAEGLPAVPYRVSPHGQPMHEAKYRALLTERLAEAMEGAAESEVYRALR
GGSGEQAAKKERIAGRELHATVFANLLKKGRAGGLAALRELQSELSVHSEADPADLVELLLSYRALNGWSEIIELARQMP
PALADSVLVQQQLGLALNWAGEGEHAEQVLRQLIARRGPSSDSYGILGRIMKDRWEQALTRGEMELARELLQKAASAYLK
GFEADWRSTYPGVNAVTLMELKEPADPRRREILPVVHYAVEQRIRSGAADYWDYATLLELAALSCDEAKGRDALGRSLAM
VREAWEPETTARDLRLIREARQRRGAECPAWAEYAESELLKAAERGTARP

Sequences:

>Translated_450_residues
MPNSEPLCLVIIPYEKKKDAAGKVVDYETVFRRLIVPAVEAAGLLPVRADEQRTGCLNLRQPLERLRYCDCALADLSTGD
PRVLYQLGIRQAVHPVRTLLVYAAGCAQLPLEAEGLPAVPYRVSPHGQPMHEAKYRALLTERLAEAMEGAAESEVYRALR
GGSGEQAAKKERIAGRELHATVFANLLKKGRAGGLAALRELQSELSVHSEADPADLVELLLSYRALNGWSEIIELARQMP
PALADSVLVQQQLGLALNWAGEGEHAEQVLRQLIARRGPSSDSYGILGRIMKDRWEQALTRGEMELARELLQKAASAYLK
GFEADWRSTYPGVNAVTLMELKEPADPRRREILPVVHYAVEQRIRSGAADYWDYATLLELAALSCDEAKGRDALGRSLAM
VREAWEPETTARDLRLIREARQRRGAECPAWAEYAESELLKAAERGTARP
>Mature_449_residues
PNSEPLCLVIIPYEKKKDAAGKVVDYETVFRRLIVPAVEAAGLLPVRADEQRTGCLNLRQPLERLRYCDCALADLSTGDP
RVLYQLGIRQAVHPVRTLLVYAAGCAQLPLEAEGLPAVPYRVSPHGQPMHEAKYRALLTERLAEAMEGAAESEVYRALRG
GSGEQAAKKERIAGRELHATVFANLLKKGRAGGLAALRELQSELSVHSEADPADLVELLLSYRALNGWSEIIELARQMPP
ALADSVLVQQQLGLALNWAGEGEHAEQVLRQLIARRGPSSDSYGILGRIMKDRWEQALTRGEMELARELLQKAASAYLKG
FEADWRSTYPGVNAVTLMELKEPADPRRREILPVVHYAVEQRIRSGAADYWDYATLLELAALSCDEAKGRDALGRSLAMV
REAWEPETTARDLRLIREARQRRGAECPAWAEYAESELLKAAERGTARP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49857; Mature: 49725

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNSEPLCLVIIPYEKKKDAAGKVVDYETVFRRLIVPAVEAAGLLPVRADEQRTGCLNLR
CCCCCCEEEEEECCCCCCCCCCCEECHHHHHHHHHHHHHHHCCCCCCCCCCHHHCHHHHH
QPLERLRYCDCALADLSTGDPRVLYQLGIRQAVHPVRTLLVYAAGCAQLPLEAEGLPAVP
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
YRVSPHGQPMHEAKYRALLTERLAEAMEGAAESEVYRALRGGSGEQAAKKERIAGRELHA
EEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCHHHHH
TVFANLLKKGRAGGLAALRELQSELSVHSEADPADLVELLLSYRALNGWSEIIELARQMP
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCC
PALADSVLVQQQLGLALNWAGEGEHAEQVLRQLIARRGPSSDSYGILGRIMKDRWEQALT
HHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
RGEMELARELLQKAASAYLKGFEADWRSTYPGVNAVTLMELKEPADPRRREILPVVHYAV
HHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCEEEEEHHHCCCCHHHHHHHHHHHHHH
EQRIRSGAADYWDYATLLELAALSCDEAKGRDALGRSLAMVREAWEPETTARDLRLIREA
HHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
RQRRGAECPAWAEYAESELLKAAERGTARP
HHHCCCCCCHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PNSEPLCLVIIPYEKKKDAAGKVVDYETVFRRLIVPAVEAAGLLPVRADEQRTGCLNLR
CCCCCEEEEEECCCCCCCCCCCEECHHHHHHHHHHHHHHHCCCCCCCCCCHHHCHHHHH
QPLERLRYCDCALADLSTGDPRVLYQLGIRQAVHPVRTLLVYAAGCAQLPLEAEGLPAVP
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
YRVSPHGQPMHEAKYRALLTERLAEAMEGAAESEVYRALRGGSGEQAAKKERIAGRELHA
EEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCHHHHH
TVFANLLKKGRAGGLAALRELQSELSVHSEADPADLVELLLSYRALNGWSEIIELARQMP
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCC
PALADSVLVQQQLGLALNWAGEGEHAEQVLRQLIARRGPSSDSYGILGRIMKDRWEQALT
HHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
RGEMELARELLQKAASAYLKGFEADWRSTYPGVNAVTLMELKEPADPRRREILPVVHYAV
HHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCEEEEEHHHCCCCHHHHHHHHHHHHHH
EQRIRSGAADYWDYATLLELAALSCDEAKGRDALGRSLAMVREAWEPETTARDLRLIREA
HHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
RQRRGAECPAWAEYAESELLKAAERGTARP
HHHCCCCCCHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA