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The map label for this gene is bphB [H]

Identifier: 197118502

GI number: 197118502

Start: 2458999

End: 2460642

Strand: Direct

Name: bphB [H]

Synonym: Gbem_2120

Alternate gene names: 197118502

Gene position: 2458999-2460642 (Clockwise)

Preceding gene: 197118501

Following gene: 197118503

Centisome position: 53.28

GC content: 62.23

Gene sequence:

>1644_bases
ATGCCAGATGAGCCTGCCCGGGGGAGCGAAGGGATCCCCCTGCCGCGCGAGGTCGGCGGCATAGCCCTTTTGTACGTAGA
GGACGAGGCGGACGCGAGAGTCATGGTGGCGAAGATGCTCAGCATGAACTACCCGCACCTCACCATCTACCACGCCGACA
ACGGTGCCTCCGGGCTTGAGCTTTACCGGCAGCGGCGCCCCGACATCGTGATGACCGACATCAACATGCCCGTCATGGAC
GGGATCAGGATGTCCCGGGAAATCAAATCCCTAAACCCCGAAGTACACATCATCGCAGTAACAGCCCACAGCGACACCTC
CTACCTCTTGAACGCCATCGAAATCGGCGTGCACAACTACGTGCTGAAGCCGCTCAACTACCAGGAACTGTTCGGCGTGA
TCGACAAGGTGCTGGAACAGGTGACACTGAAGCGCCTGGTGGGGGAGCAAAACCAGCGCATCCTCGAGAGCGAGAAGCAG
TTGGCCGGCTCCCAGCGTATCGCCCACCTGGGAAGCTGGGAGTGGCACGTTGACTGCGGCACCATGAAATGGTCGGACGA
GCTCTACCGCATCTGCGGCCTCGATCCCGGCTCTCTCACCCCTGACTACCAGCGTTTCCTGGAGCTTTTCTCCGTAGAAG
ACCGCCCGGTCATCGAGGGGCTCATGCATGACGCCCTGAAGGGAGAGGCGGAGGAGGATCACCGTTTCTGCCGCGTGCTC
CGACCCGACGATTCCAGAAGAATCGTCCGGGTGGAAGCGGACCTCTTGACGGAGGACCGCGGCCAGAAGGCGACGGTGAT
CGGCACCTGCCACGACGTGACCGAGCTGAAGGAAGCGGAGGAACAGGTTCGGCTGTTGACGGAGGACCTAGAGCGGCGCG
TGATCCAGCGCACCTCGCTTTTGCAGGCGACGGTGAGCGAACTAGAGAGTTTCAGCTACTTCGTCTCTCACGATCTACGC
GCGCCGGTGGCCCGGCTGGAAGGTTACTGCAAGGCGCTTTTGGAGGACTGCGGGGCCGAGGGGCACGGCAACTGCCAGCA
GTACGCCGAACGCGCCGAGCACGTGGCGCAGCAGATCAAGCAGATCATCGACGCTTTCAACAGCCTGACCCACTACGCGC
GTTGCGCCCTTGCCCTAGGCGAGACCGACCTGAGCTCGATGGTAAGGGAGGTGGCTCAAGAGCTTCAGCAGGGCGAGCCG
CAGCGCCGGGTCGAGGTTCTGGTGGCGCCCGGTATCAGGGTGAGGGGGGACGCGGAACTGCTGCGGACAGCCTTGAGCGA
GCTTTTGAAAAACGCCTGGAAGTTCACCTCCACGACGGAGTACGCCCGCATCGAGTTCGGCAGGCGCGTGCAGGAAGGGG
CATCGATCTACTACGTAAAGGACAACGGGGCCGGTTTCAACATGAAGTACGTCGACAAGCTCTTCAAACCTTTCCAGACC
ATCCACACCCCCGGCGAGTTCGATTGGAGCGGCACCGGGATCGGTCTCGCCAAGGTGCACAGCATCATCCTGCGCCACGG
CGGCCGGGTCTGGGCTGAGGGAGAGGTCGGCTACGGGGCGACCTTCAGCTTTACCCTGGAACCCAACCCCGAAACGGGGA
GCTATCTGACGGAGGGGCTTTCCTCCCAGGAACAAAGGGGCTAG

Upstream 100 bases:

>100_bases
TCAGGAACGCTGCTTCGAGCTGGAGGTGCTCGACTACCTCTACAAACCGATGACTGCCGACATGCTGCAGGGCCTGCTGC
GGCGCAGGGAGGAGGGGTGA

Downstream 100 bases:

>100_bases
GGCATGGCCTACGACCAATCCGCATCCAGGCTGCCTGCAGAAGGGATCGAGGAACTGAGGGCGCACTTGGCCGCCATCGT
CGATTCCTCCGACGACGCCA

Product: response receiver histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 547; Mature: 546

Protein sequence:

>547_residues
MPDEPARGSEGIPLPREVGGIALLYVEDEADARVMVAKMLSMNYPHLTIYHADNGASGLELYRQRRPDIVMTDINMPVMD
GIRMSREIKSLNPEVHIIAVTAHSDTSYLLNAIEIGVHNYVLKPLNYQELFGVIDKVLEQVTLKRLVGEQNQRILESEKQ
LAGSQRIAHLGSWEWHVDCGTMKWSDELYRICGLDPGSLTPDYQRFLELFSVEDRPVIEGLMHDALKGEAEEDHRFCRVL
RPDDSRRIVRVEADLLTEDRGQKATVIGTCHDVTELKEAEEQVRLLTEDLERRVIQRTSLLQATVSELESFSYFVSHDLR
APVARLEGYCKALLEDCGAEGHGNCQQYAERAEHVAQQIKQIIDAFNSLTHYARCALALGETDLSSMVREVAQELQQGEP
QRRVEVLVAPGIRVRGDAELLRTALSELLKNAWKFTSTTEYARIEFGRRVQEGASIYYVKDNGAGFNMKYVDKLFKPFQT
IHTPGEFDWSGTGIGLAKVHSIILRHGGRVWAEGEVGYGATFSFTLEPNPETGSYLTEGLSSQEQRG

Sequences:

>Translated_547_residues
MPDEPARGSEGIPLPREVGGIALLYVEDEADARVMVAKMLSMNYPHLTIYHADNGASGLELYRQRRPDIVMTDINMPVMD
GIRMSREIKSLNPEVHIIAVTAHSDTSYLLNAIEIGVHNYVLKPLNYQELFGVIDKVLEQVTLKRLVGEQNQRILESEKQ
LAGSQRIAHLGSWEWHVDCGTMKWSDELYRICGLDPGSLTPDYQRFLELFSVEDRPVIEGLMHDALKGEAEEDHRFCRVL
RPDDSRRIVRVEADLLTEDRGQKATVIGTCHDVTELKEAEEQVRLLTEDLERRVIQRTSLLQATVSELESFSYFVSHDLR
APVARLEGYCKALLEDCGAEGHGNCQQYAERAEHVAQQIKQIIDAFNSLTHYARCALALGETDLSSMVREVAQELQQGEP
QRRVEVLVAPGIRVRGDAELLRTALSELLKNAWKFTSTTEYARIEFGRRVQEGASIYYVKDNGAGFNMKYVDKLFKPFQT
IHTPGEFDWSGTGIGLAKVHSIILRHGGRVWAEGEVGYGATFSFTLEPNPETGSYLTEGLSSQEQRG
>Mature_546_residues
PDEPARGSEGIPLPREVGGIALLYVEDEADARVMVAKMLSMNYPHLTIYHADNGASGLELYRQRRPDIVMTDINMPVMDG
IRMSREIKSLNPEVHIIAVTAHSDTSYLLNAIEIGVHNYVLKPLNYQELFGVIDKVLEQVTLKRLVGEQNQRILESEKQL
AGSQRIAHLGSWEWHVDCGTMKWSDELYRICGLDPGSLTPDYQRFLELFSVEDRPVIEGLMHDALKGEAEEDHRFCRVLR
PDDSRRIVRVEADLLTEDRGQKATVIGTCHDVTELKEAEEQVRLLTEDLERRVIQRTSLLQATVSELESFSYFVSHDLRA
PVARLEGYCKALLEDCGAEGHGNCQQYAERAEHVAQQIKQIIDAFNSLTHYARCALALGETDLSSMVREVAQELQQGEPQ
RRVEVLVAPGIRVRGDAELLRTALSELLKNAWKFTSTTEYARIEFGRRVQEGASIYYVKDNGAGFNMKYVDKLFKPFQTI
HTPGEFDWSGTGIGLAKVHSIILRHGGRVWAEGEVGYGATFSFTLEPNPETGSYLTEGLSSQEQRG

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=251, Percent_Identity=28.6852589641434, Blast_Score=79, Evalue=6e-16,
Organism=Escherichia coli, GI1786600, Length=220, Percent_Identity=28.1818181818182, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1788550, Length=153, Percent_Identity=27.4509803921569, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI1790436, Length=250, Percent_Identity=26.4, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1790299, Length=113, Percent_Identity=30.9734513274336, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1790437, Length=87, Percent_Identity=35.632183908046, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1788905, Length=93, Percent_Identity=32.258064516129, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI48994928, Length=274, Percent_Identity=24.8175182481752, Blast_Score=63, Evalue=6e-11,
Organism=Escherichia coli, GI1787894, Length=219, Percent_Identity=28.310502283105, Blast_Score=63, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR013654
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF00512 HisKA; PF08446 PAS_2; PF00360 Phytochrome [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 61605; Mature: 61473

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN ; PS00758 ARGE_DAPE_CPG2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDEPARGSEGIPLPREVGGIALLYVEDEADARVMVAKMLSMNYPHLTIYHADNGASGLE
CCCCCCCCCCCCCCCHHHCCEEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHH
LYRQRRPDIVMTDINMPVMDGIRMSREIKSLNPEVHIIAVTAHSDTSYLLNAIEIGVHNY
HHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHH
VLKPLNYQELFGVIDKVLEQVTLKRLVGEQNQRILESEKQLAGSQRIAHLGSWEWHVDCG
HCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
TMKWSDELYRICGLDPGSLTPDYQRFLELFSVEDRPVIEGLMHDALKGEAEEDHRFCRVL
CEEHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHEEE
RPDDSRRIVRVEADLLTEDRGQKATVIGTCHDVTELKEAEEQVRLLTEDLERRVIQRTSL
CCCCCCEEEEEEHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQATVSELESFSYFVSHDLRAPVARLEGYCKALLEDCGAEGHGNCQQYAERAEHVAQQIK
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
QIIDAFNSLTHYARCALALGETDLSSMVREVAQELQQGEPQRRVEVLVAPGIRVRGDAEL
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEECCCHHH
LRTALSELLKNAWKFTSTTEYARIEFGRRVQEGASIYYVKDNGAGFNMKYVDKLFKPFQT
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHH
IHTPGEFDWSGTGIGLAKVHSIILRHGGRVWAEGEVGYGATFSFTLEPNPETGSYLTEGL
HCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCEEEEEEECCCCCCHHHHHHCC
SSQEQRG
CCCCCCC
>Mature Secondary Structure 
PDEPARGSEGIPLPREVGGIALLYVEDEADARVMVAKMLSMNYPHLTIYHADNGASGLE
CCCCCCCCCCCCCCHHHCCEEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHH
LYRQRRPDIVMTDINMPVMDGIRMSREIKSLNPEVHIIAVTAHSDTSYLLNAIEIGVHNY
HHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHH
VLKPLNYQELFGVIDKVLEQVTLKRLVGEQNQRILESEKQLAGSQRIAHLGSWEWHVDCG
HCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
TMKWSDELYRICGLDPGSLTPDYQRFLELFSVEDRPVIEGLMHDALKGEAEEDHRFCRVL
CEEHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHEEE
RPDDSRRIVRVEADLLTEDRGQKATVIGTCHDVTELKEAEEQVRLLTEDLERRVIQRTSL
CCCCCCEEEEEEHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQATVSELESFSYFVSHDLRAPVARLEGYCKALLEDCGAEGHGNCQQYAERAEHVAQQIK
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
QIIDAFNSLTHYARCALALGETDLSSMVREVAQELQQGEPQRRVEVLVAPGIRVRGDAEL
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEECCCHHH
LRTALSELLKNAWKFTSTTEYARIEFGRRVQEGASIYYVKDNGAGFNMKYVDKLFKPFQT
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHH
IHTPGEFDWSGTGIGLAKVHSIILRHGGRVWAEGEVGYGATFSFTLEPNPETGSYLTEGL
HCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCEEEEEEECCCCCCHHHHHHCC
SSQEQRG
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]