| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118499
Identifier: 197118499
GI number: 197118499
Start: 2454104
End: 2456167
Strand: Direct
Name: 197118499
Synonym: Gbem_2117
Alternate gene names: NA
Gene position: 2454104-2456167 (Clockwise)
Preceding gene: 197118498
Following gene: 197118500
Centisome position: 53.17
GC content: 62.11
Gene sequence:
>2064_bases ATGGCAAATGCGGTGAACAAACCGGAACCGGAGCCTGCGCCAGGCACGGAGAGCGCCGAGGAGCAGGAGAGCCAGGCGGA CCGCGGCCGTAGCGTCAGCAAAAGCCACCTGGTGAACCGGCTCAACTACCTCAACTTCCAGGATCAGACCGTGCTGGTCA GCCTGCGGCACGAGGCGTACGACGACGCGATATCCCTGCGCGCCCGTCCGCAGCCCTGCGCCGGGGAACGGCTGGACCTG GTCTGGGCCGAGATCCCGAGCCTCAAGCAGCTGCTGAAGACCTACCGGTTCGAGTACCTGCTCATCGCCGACGGCCGGAA GTACCTGGTGGTGAACTCCGAGCTGCTCACCATCAACGAAGAGGGGCTCTCGCTTTTGCTCCCGGCCGCCTGCCGCGAGT TCCAAGCGAGGAAGATAAAGAGGCACCCGGCGCGGGAGATTTCGGTGCAGTTGATCCAGAACGGCGTCACCTTCGACTGC CAGCTCGTCGACTTCACGCCGGTCTCGGTGCGGGCCGCGGGGAGCCTTAGGAGCGCCGAGACGCTCATGTGGGTCAACAC GGAGAGCCCGGTGCACCTGCGCCTTGTGCGGGACGGCGAGGTTATCTACTCCGGCAACTTCGCCATCCACTCGCGGCAGT TGTCCGGCAAGAGCTGCTCCTTCGTGCTGAGGCAGTTAAACAGCAACATCCAGAGATACCGCACCAAGAAGTACCGGAAT GCCAGGCAGCAGCTGGTGCCGTCCCCCAACATCGTCTTCGAGCACCCGCTCATCGACAAGCGGGTCAACCTGAAGATGGC CGATATCTCGGGCACCGGCTTCGCGGTCGAAGAAGGGGAGGGTGACAGCGTGCTGATGGCGGGGATGATGCTCCCGGAGC TTAAGATCAGCTTCGCGCACGGCTTCAGCCTCAAGTGCCTGGCCCAGGTGGTTTCCCGCAACGCGGCCGGGGGGGAAGAG GAAGGGAGTGTCCGCTGCGGCCTCGCCATCCTGGACATGGAGATCCACGACCACGTGAAGCTCCTGTCGATCCTGCACCA GGTGGCGAACCGGAAATCGTACGTTTCCGCCGAGGTTGACCTGGACGAGCTTTGGGATTTCTTCTTCGAGACTGGGTTCA TCTATCCCGGAAAATACGCACACTTCCAGGCCAACAAGGAGAGCATCAAGGAGACCTACGCGAAGCTCTACACGCACACC CCCCAGATCGCCCGCCATTTCATCTATCTCGACCGCGGCGTCATCCTAGGCCATCTCGCCGTGGTCCGCTTTTACCCGAA TTCCTGGCTCATCCACCATCATGCTGCCCGCAAGTCGGTCTCCATCAAGGCGGGGCTCGCCGTGCTGGACCAGGTGAGCC GTTACCTGAACGAGCTGGAAAGCTTCGCCTTCGCCCATCTGCGCTACGTCTACTGCTACTACCGCCCCGACAACAAGTTC CCCAGCCGGGTCTTCGGCGGCTTCGCCAAGAAGCACCAGGACCAGTCAAGCTGCTCGCTCGACCTCTTCTCCTATGCCTT TCACCACGGGACCGGCGAGCGGGCGGGGCTCCCCGTGCCGTGGGAGTTCGGGGAGAGCAGCCGCTTCGACGTGGCGGAGC TTGCGCGCTTTTACCGTCACGTTTCGGGCGGGGTGATGATGCAGGCCTTCGAGCTCTATCCCGGCGGGGCCGACCCGGAG GATCTGGCCCGGGAGTACCGCGCGCTCGGTTTCAGGAAGGAGCTGTACCTGTATTCGCTGCGCAAACAGGGGAGCCTCAA GGCGTTTTTCCTGGTGAACTGCACCGACGCCGGTTTCAACATGGCGGAACTGACCAACTGCGTCACCGTCATGGTGCTGG ACGAGAAGGTTCCTGTCGGCTTTATAGAGAGCTGTCTGGAGGAGATCGCCCGGCATTACGATGGGAACGAGATGCCGGTA CTTACCTACCCGTTTTCCTACGTTGAGCAGAACTCGATTCCCTACGACAAGGTCTACCTGCTCTGGGTGCTGGACCTGCA GTACAGCGACGACTACCTTGAATACTGCGAGGGGCTGTTCAGGACCGGGAAAAAGGGTGCCTGA
Upstream 100 bases:
>100_bases CTGGCCTCGCCCAACTACGCTTCTCCGCCAAAGGGAGCAGTCGAGGCCGGCGCGGGCACGGCGGAACCCGGCGCGTGACC GGCCAGGGAGCGAGGCTTAC
Downstream 100 bases:
>100_bases CGACTGGCCGGAGCTTCGATGCAACCTTCACGACTACGGGACATGCCGCTTTATAACAGCAGGATCATCAACTCCTACAT CCTGCTGATAAAGCACAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: Serine/Threonine Protein Kinase
Number of amino acids: Translated: 687; Mature: 686
Protein sequence:
>687_residues MANAVNKPEPEPAPGTESAEEQESQADRGRSVSKSHLVNRLNYLNFQDQTVLVSLRHEAYDDAISLRARPQPCAGERLDL VWAEIPSLKQLLKTYRFEYLLIADGRKYLVVNSELLTINEEGLSLLLPAACREFQARKIKRHPAREISVQLIQNGVTFDC QLVDFTPVSVRAAGSLRSAETLMWVNTESPVHLRLVRDGEVIYSGNFAIHSRQLSGKSCSFVLRQLNSNIQRYRTKKYRN ARQQLVPSPNIVFEHPLIDKRVNLKMADISGTGFAVEEGEGDSVLMAGMMLPELKISFAHGFSLKCLAQVVSRNAAGGEE EGSVRCGLAILDMEIHDHVKLLSILHQVANRKSYVSAEVDLDELWDFFFETGFIYPGKYAHFQANKESIKETYAKLYTHT PQIARHFIYLDRGVILGHLAVVRFYPNSWLIHHHAARKSVSIKAGLAVLDQVSRYLNELESFAFAHLRYVYCYYRPDNKF PSRVFGGFAKKHQDQSSCSLDLFSYAFHHGTGERAGLPVPWEFGESSRFDVAELARFYRHVSGGVMMQAFELYPGGADPE DLAREYRALGFRKELYLYSLRKQGSLKAFFLVNCTDAGFNMAELTNCVTVMVLDEKVPVGFIESCLEEIARHYDGNEMPV LTYPFSYVEQNSIPYDKVYLLWVLDLQYSDDYLEYCEGLFRTGKKGA
Sequences:
>Translated_687_residues MANAVNKPEPEPAPGTESAEEQESQADRGRSVSKSHLVNRLNYLNFQDQTVLVSLRHEAYDDAISLRARPQPCAGERLDL VWAEIPSLKQLLKTYRFEYLLIADGRKYLVVNSELLTINEEGLSLLLPAACREFQARKIKRHPAREISVQLIQNGVTFDC QLVDFTPVSVRAAGSLRSAETLMWVNTESPVHLRLVRDGEVIYSGNFAIHSRQLSGKSCSFVLRQLNSNIQRYRTKKYRN ARQQLVPSPNIVFEHPLIDKRVNLKMADISGTGFAVEEGEGDSVLMAGMMLPELKISFAHGFSLKCLAQVVSRNAAGGEE EGSVRCGLAILDMEIHDHVKLLSILHQVANRKSYVSAEVDLDELWDFFFETGFIYPGKYAHFQANKESIKETYAKLYTHT PQIARHFIYLDRGVILGHLAVVRFYPNSWLIHHHAARKSVSIKAGLAVLDQVSRYLNELESFAFAHLRYVYCYYRPDNKF PSRVFGGFAKKHQDQSSCSLDLFSYAFHHGTGERAGLPVPWEFGESSRFDVAELARFYRHVSGGVMMQAFELYPGGADPE DLAREYRALGFRKELYLYSLRKQGSLKAFFLVNCTDAGFNMAELTNCVTVMVLDEKVPVGFIESCLEEIARHYDGNEMPV LTYPFSYVEQNSIPYDKVYLLWVLDLQYSDDYLEYCEGLFRTGKKGA >Mature_686_residues ANAVNKPEPEPAPGTESAEEQESQADRGRSVSKSHLVNRLNYLNFQDQTVLVSLRHEAYDDAISLRARPQPCAGERLDLV WAEIPSLKQLLKTYRFEYLLIADGRKYLVVNSELLTINEEGLSLLLPAACREFQARKIKRHPAREISVQLIQNGVTFDCQ LVDFTPVSVRAAGSLRSAETLMWVNTESPVHLRLVRDGEVIYSGNFAIHSRQLSGKSCSFVLRQLNSNIQRYRTKKYRNA RQQLVPSPNIVFEHPLIDKRVNLKMADISGTGFAVEEGEGDSVLMAGMMLPELKISFAHGFSLKCLAQVVSRNAAGGEEE GSVRCGLAILDMEIHDHVKLLSILHQVANRKSYVSAEVDLDELWDFFFETGFIYPGKYAHFQANKESIKETYAKLYTHTP QIARHFIYLDRGVILGHLAVVRFYPNSWLIHHHAARKSVSIKAGLAVLDQVSRYLNELESFAFAHLRYVYCYYRPDNKFP SRVFGGFAKKHQDQSSCSLDLFSYAFHHGTGERAGLPVPWEFGESSRFDVAELARFYRHVSGGVMMQAFELYPGGADPED LAREYRALGFRKELYLYSLRKQGSLKAFFLVNCTDAGFNMAELTNCVTVMVLDEKVPVGFIESCLEEIARHYDGNEMPVL TYPFSYVEQNSIPYDKVYLLWVLDLQYSDDYLEYCEGLFRTGKKGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78000; Mature: 77869
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANAVNKPEPEPAPGTESAEEQESQADRGRSVSKSHLVNRLNYLNFQDQTVLVSLRHEAY CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEEECHHHH DDAISLRARPQPCAGERLDLVWAEIPSLKQLLKTYRFEYLLIADGRKYLVVNSELLTINE CCHHEECCCCCCCCCCCEEEHHHCCHHHHHHHHHHCEEEEEEECCCEEEEEECEEEEEEC EGLSLLLPAACREFQARKIKRHPAREISVQLIQNGVTFDCQLVDFTPVSVRAAGSLRSAE CCCEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEEEEECCCEEEECCCCCCCC TLMWVNTESPVHLRLVRDGEVIYSGNFAIHSRQLSGKSCSFVLRQLNSNIQRYRTKKYRN EEEEEECCCCEEEEEEECCCEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH ARQQLVPSPNIVFEHPLIDKRVNLKMADISGTGFAVEEGEGDSVLMAGMMLPELKISFAH HHHHCCCCCCEEEECCCCCCCCCEEEEEECCCCEEEECCCCCCEEEECHHCCCEEEEECC GFSLKCLAQVVSRNAAGGEEEGSVRCGLAILDMEIHDHVKLLSILHQVANRKSYVSAEVD CCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEHHHHHHHHHHHHHHHCCCCEEEEECC LDELWDFFFETGFIYPGKYAHFQANKESIKETYAKLYTHTPQIARHFIYLDRGVILGHLA HHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHEEE VVRFYPNSWLIHHHAARKSVSIKAGLAVLDQVSRYLNELESFAFAHLRYVYCYYRPDNKF EEEECCCCEEEEEHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCC PSRVFGGFAKKHQDQSSCSLDLFSYAFHHGTGERAGLPVPWEFGESSRFDVAELARFYRH CHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH VSGGVMMQAFELYPGGADPEDLAREYRALGFRKELYLYSLRKQGSLKAFFLVNCTDAGFN HCCCCEEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEEEEECCCCCC MAELTNCVTVMVLDEKVPVGFIESCLEEIARHYDGNEMPVLTYPFSYVEQNSIPYDKVYL HHHHHCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHCCCCCCCEEEE LWVLDLQYSDDYLEYCEGLFRTGKKGA EEEEEECCCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure ANAVNKPEPEPAPGTESAEEQESQADRGRSVSKSHLVNRLNYLNFQDQTVLVSLRHEAY CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEEECHHHH DDAISLRARPQPCAGERLDLVWAEIPSLKQLLKTYRFEYLLIADGRKYLVVNSELLTINE CCHHEECCCCCCCCCCCEEEHHHCCHHHHHHHHHHCEEEEEEECCCEEEEEECEEEEEEC EGLSLLLPAACREFQARKIKRHPAREISVQLIQNGVTFDCQLVDFTPVSVRAAGSLRSAE CCCEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEEEEECCCEEEECCCCCCCC TLMWVNTESPVHLRLVRDGEVIYSGNFAIHSRQLSGKSCSFVLRQLNSNIQRYRTKKYRN EEEEEECCCCEEEEEEECCCEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH ARQQLVPSPNIVFEHPLIDKRVNLKMADISGTGFAVEEGEGDSVLMAGMMLPELKISFAH HHHHCCCCCCEEEECCCCCCCCCEEEEEECCCCEEEECCCCCCEEEECHHCCCEEEEECC GFSLKCLAQVVSRNAAGGEEEGSVRCGLAILDMEIHDHVKLLSILHQVANRKSYVSAEVD CCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEHHHHHHHHHHHHHHHCCCCEEEEECC LDELWDFFFETGFIYPGKYAHFQANKESIKETYAKLYTHTPQIARHFIYLDRGVILGHLA HHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHEEE VVRFYPNSWLIHHHAARKSVSIKAGLAVLDQVSRYLNELESFAFAHLRYVYCYYRPDNKF EEEECCCCEEEEEHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCC PSRVFGGFAKKHQDQSSCSLDLFSYAFHHGTGERAGLPVPWEFGESSRFDVAELARFYRH CHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH VSGGVMMQAFELYPGGADPEDLAREYRALGFRKELYLYSLRKQGSLKAFFLVNCTDAGFN HCCCCEEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEEEEECCCCCC MAELTNCVTVMVLDEKVPVGFIESCLEEIARHYDGNEMPVLTYPFSYVEQNSIPYDKVYL HHHHHCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHCCCCCCCEEEE LWVLDLQYSDDYLEYCEGLFRTGKKGA EEEEEECCCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA