| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is fabH-3 [H]
Identifier: 197118484
GI number: 197118484
Start: 2427631
End: 2428674
Strand: Reverse
Name: fabH-3 [H]
Synonym: Gbem_2102
Alternate gene names: 197118484
Gene position: 2428674-2427631 (Counterclockwise)
Preceding gene: 197118486
Following gene: 197118483
Centisome position: 52.62
GC content: 65.42
Gene sequence:
>1044_bases ATGAAGTATTCCAAGGTATTTATCGAATCTTTCGGCTACGAGCTGGCTCCGGTGGTCGTCACTTCCGACGAGCTGGAGGC GCGGCTCGAACCGCTTTACAAAACCCTGCACTTCACCCCCGGACAACTCCAGGCGCTGACCGGCATTCGCGAACGGCGCT GGTGGGAGCCTGGTTTCCAGCTTTCCAAGGGGGCCGTGGCCGCCGGCAAAAAGGCGCTTTCGGCTGCCGGCGTCCCTGCC AGCGAGATCGGGGCGCTCCTTTACACCGGCGTCTGCCGCGAGCGGTTCGAACCTGCCACCGCCTGCCGCGTGGCCGCCGG GCTCGGCATCTCGGGAAACGTCGCGGTGCTGGACCTCTCCAACGCCTGCCTCGGCGTCTTGAACGGCATCCTCGAGGTCG CGAACCGCATCGAGCTGGGGCAGATCCGCGCGGGTCTGGTGGTCTCCTGCGAGAGCGCCAGGGAAATCAACGACATCATG ATCGCCCGCATGCTCGAGGACAGGAGCATGGAGAACTTCGCCAGTTCGCTCGCCACCCTCACCGGCGGCTCCGGCGCGGT GGCCGTGCTCTTGACCGACGGCTCCTTCTCCAAATCCGGCAGGCGGCGCCTGCGCGGCGGCCTGACCCAGGCGGCCCCGG AGCACCACGCCCTTTGCCTCTGGGGCATCACCCCCGACGGCAAGGGAGGCTTCGCGCAGTCCATGAGCACCGATGCGGTC AGCGTGATGAACTATGGGGTCGAGCTCGGCCGCCGTACCTGGGAGCAGTTTCTTCCCGAGGTGGGCTGGGGCGAGCACGA CGTAGACCGGGTTGTCTGCCACCAGGTGGGCAGCGCGCACCAAAGCGCAATCTTGAAGACGTTGGGAATTCCGCTGCAGA AGGACTTCACCAGCTACGAATTCCTGGGGAACATGGGGACCGTCTCTCTGCCCCTCACGGCGGCGCTTGCCGATGAGAGG GACGTCCTCTCCGAGGGAGACCGGGTGGCGCTTCTTGGGATAGGGAGCGGACTCAACTGCCTGATGCTTGGGGTGGATTG GTAA
Upstream 100 bases:
>100_bases CAATAAATAGAATTTGGTTTTCCTCCGTGACCCCCGTGAACCTCCGAGTCCTCTGTGGTCATGCTTTTTTGATTTTAAGC TTCCGTTTTTAAGGTGATGA
Downstream 100 bases:
>100_bases AAGATTTCCCTCACCCCCCCCGCCCCTCAACCACGCAATCTCGCAGAGATGCAGGGCAGATTGTTTCACCCGCTACTCAC AGACTTCCGCAAGCTCCCCC
Product: 3-oxoacyl-(acyl carrier protein) synthase III
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III; Beta-ketoacyl-ACP synthase III; KAS III [H]
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MKYSKVFIESFGYELAPVVVTSDELEARLEPLYKTLHFTPGQLQALTGIRERRWWEPGFQLSKGAVAAGKKALSAAGVPA SEIGALLYTGVCRERFEPATACRVAAGLGISGNVAVLDLSNACLGVLNGILEVANRIELGQIRAGLVVSCESAREINDIM IARMLEDRSMENFASSLATLTGGSGAVAVLLTDGSFSKSGRRRLRGGLTQAAPEHHALCLWGITPDGKGGFAQSMSTDAV SVMNYGVELGRRTWEQFLPEVGWGEHDVDRVVCHQVGSAHQSAILKTLGIPLQKDFTSYEFLGNMGTVSLPLTAALADER DVLSEGDRVALLGIGSGLNCLMLGVDW
Sequences:
>Translated_347_residues MKYSKVFIESFGYELAPVVVTSDELEARLEPLYKTLHFTPGQLQALTGIRERRWWEPGFQLSKGAVAAGKKALSAAGVPA SEIGALLYTGVCRERFEPATACRVAAGLGISGNVAVLDLSNACLGVLNGILEVANRIELGQIRAGLVVSCESAREINDIM IARMLEDRSMENFASSLATLTGGSGAVAVLLTDGSFSKSGRRRLRGGLTQAAPEHHALCLWGITPDGKGGFAQSMSTDAV SVMNYGVELGRRTWEQFLPEVGWGEHDVDRVVCHQVGSAHQSAILKTLGIPLQKDFTSYEFLGNMGTVSLPLTAALADER DVLSEGDRVALLGIGSGLNCLMLGVDW >Mature_347_residues MKYSKVFIESFGYELAPVVVTSDELEARLEPLYKTLHFTPGQLQALTGIRERRWWEPGFQLSKGAVAAGKKALSAAGVPA SEIGALLYTGVCRERFEPATACRVAAGLGISGNVAVLDLSNACLGVLNGILEVANRIELGQIRAGLVVSCESAREINDIM IARMLEDRSMENFASSLATLTGGSGAVAVLLTDGSFSKSGRRRLRGGLTQAAPEHHALCLWGITPDGKGGFAQSMSTDAV SVMNYGVELGRRTWEQFLPEVGWGEHDVDRVVCHQVGSAHQSAILKTLGIPLQKDFTSYEFLGNMGTVSLPLTAALADER DVLSEGDRVALLGIGSGLNCLMLGVDW
Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the
COG id: COG0332
COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fabH family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013751 - InterPro: IPR013747 - InterPro: IPR004655 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C [H]
EC number: =2.3.1.180 [H]
Molecular weight: Translated: 37026; Mature: 37026
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYSKVFIESFGYELAPVVVTSDELEARLEPLYKTLHFTPGQLQALTGIRERRWWEPGFQ CCHHHHHHHHCCCEEEEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCC LSKGAVAAGKKALSAAGVPASEIGALLYTGVCRERFEPATACRVAAGLGISGNVAVLDLS CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEECC NACLGVLNGILEVANRIELGQIRAGLVVSCESAREINDIMIARMLEDRSMENFASSLATL HHHHHHHHHHHHHHHHCCHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHH TGGSGAVAVLLTDGSFSKSGRRRLRGGLTQAAPEHHALCLWGITPDGKGGFAQSMSTDAV CCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCHHCCCHHHH SVMNYGVELGRRTWEQFLPEVGWGEHDVDRVVCHQVGSAHQSAILKTLGIPLQKDFTSYE HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCHHCCCCHHH FLGNMGTVSLPLTAALADERDVLSEGDRVALLGIGSGLNCLMLGVDW HHCCCCCEECCHHHHHCCCHHHHCCCCEEEEEEECCCCEEEEEECCC >Mature Secondary Structure MKYSKVFIESFGYELAPVVVTSDELEARLEPLYKTLHFTPGQLQALTGIRERRWWEPGFQ CCHHHHHHHHCCCEEEEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCC LSKGAVAAGKKALSAAGVPASEIGALLYTGVCRERFEPATACRVAAGLGISGNVAVLDLS CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEECC NACLGVLNGILEVANRIELGQIRAGLVVSCESAREINDIMIARMLEDRSMENFASSLATL HHHHHHHHHHHHHHHHCCHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHH TGGSGAVAVLLTDGSFSKSGRRRLRGGLTQAAPEHHALCLWGITPDGKGGFAQSMSTDAV CCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCHHCCCHHHH SVMNYGVELGRRTWEQFLPEVGWGEHDVDRVVCHQVGSAHQSAILKTLGIPLQKDFTSYE HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCHHCCCCHHH FLGNMGTVSLPLTAALADERDVLSEGDRVALLGIGSGLNCLMLGVDW HHCCCCCEECCHHHHHCCCHHHHCCCCEEEEEEECCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA