| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118474
Identifier: 197118474
GI number: 197118474
Start: 2419517
End: 2419981
Strand: Reverse
Name: 197118474
Synonym: Gbem_2092
Alternate gene names: NA
Gene position: 2419981-2419517 (Counterclockwise)
Preceding gene: 197118475
Following gene: 197118473
Centisome position: 52.44
GC content: 58.49
Gene sequence:
>465_bases ATGGAAGTTAGACGCGGCATCACACCTTTTTGCATGGCTCTGGCGTTGCTTTGGGTAGCCCCACAGGCGCAGGCAACGCT CGGAGAGAGGGGCGATTCCATCGCGAAAGACAGCAAAGCCTTATCCACGGTCACCCGCAGCACAATCCATCGCACAAAAT ACGCAATGCAGGAGATGACCTCGGAAACGACAGCCGTCCGTGAGTACCAGACGCCATCGGGCATCGTCTTCGCCGTTGCC TGGAACGGGCTGGTCCATCCGGATCTCACTCAACTGCTCGGCTCCTACGACCAGGAGTACCGTACGGCCCTATCCAAGCA GCAACGCAAGCGCGGACACAGGCAGACCCAGGTGAAGTCGAACCGGGTCGTGGTCGAGACATGGGGTCATATGCGAAACC TACAGGGGAGGGCCTACCTGCCTGGACTGGTCCCTCAAGGAGTGAACCTCAATGAGATCCGTTAA
Upstream 100 bases:
>100_bases AAAAATAAACAACAACGTAAAGGAAAATTAATCTTGCGTGATACAATGGAAAAGTTTTTTTTTGTGGGAGCCAAATTTCA CTCAGGATTCGGGGGCGGAC
Downstream 100 bases:
>100_bases CCTACTGGCGATCTGGACCTTCCTGCTGTCGTTCATCATCATGCCCGGCTGCGGCGGGGGAGGCGGAGGGGGCAACAACC CCGCTCCGGCTCCGACTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MEVRRGITPFCMALALLWVAPQAQATLGERGDSIAKDSKALSTVTRSTIHRTKYAMQEMTSETTAVREYQTPSGIVFAVA WNGLVHPDLTQLLGSYDQEYRTALSKQQRKRGHRQTQVKSNRVVVETWGHMRNLQGRAYLPGLVPQGVNLNEIR
Sequences:
>Translated_154_residues MEVRRGITPFCMALALLWVAPQAQATLGERGDSIAKDSKALSTVTRSTIHRTKYAMQEMTSETTAVREYQTPSGIVFAVA WNGLVHPDLTQLLGSYDQEYRTALSKQQRKRGHRQTQVKSNRVVVETWGHMRNLQGRAYLPGLVPQGVNLNEIR >Mature_154_residues MEVRRGITPFCMALALLWVAPQAQATLGERGDSIAKDSKALSTVTRSTIHRTKYAMQEMTSETTAVREYQTPSGIVFAVA WNGLVHPDLTQLLGSYDQEYRTALSKQQRKRGHRQTQVKSNRVVVETWGHMRNLQGRAYLPGLVPQGVNLNEIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17324; Mature: 17324
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVRRGITPFCMALALLWVAPQAQATLGERGDSIAKDSKALSTVTRSTIHRTKYAMQEMT CCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SETTAVREYQTPSGIVFAVAWNGLVHPDLTQLLGSYDQEYRTALSKQQRKRGHRQTQVKS HHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHC NRVVVETWGHMRNLQGRAYLPGLVPQGVNLNEIR CCEEEEECHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MEVRRGITPFCMALALLWVAPQAQATLGERGDSIAKDSKALSTVTRSTIHRTKYAMQEMT CCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SETTAVREYQTPSGIVFAVAWNGLVHPDLTQLLGSYDQEYRTALSKQQRKRGHRQTQVKS HHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHC NRVVVETWGHMRNLQGRAYLPGLVPQGVNLNEIR CCEEEEECHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA